BLASTX nr result

ID: Cnidium21_contig00005177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005177
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273680.1| PREDICTED: BAH and coiled-coil domain-contai...    62   4e-07
gb|ABK25132.1| unknown [Picea sitchensis]                              62   4e-07
ref|XP_002525318.1| phd finger transcription factor, putative [R...    60   1e-06
ref|XP_002321145.1| ebs-bah-phd domain-containing protein [Popul...    60   1e-06
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...    59   3e-06

>ref|XP_002273680.1| PREDICTED: BAH and coiled-coil domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|359485509|ref|XP_003633285.1|
           PREDICTED: BAH and coiled-coil domain-containing protein
           1 isoform 2 [Vitis vinifera]
           gi|297739198|emb|CBI28849.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
 Frame = -1

Query: 795 SCMGMTIDEAKMLEQFLCSDCASDEDARRS-NSFPVPGTSTEVQ 667
           SCMGMTI+EAK L+ FLCSDC+SD+DA+RS N+FPV  +  +V+
Sbjct: 166 SCMGMTIEEAKKLDHFLCSDCSSDDDAKRSLNAFPVSPSEAKVE 209


>gb|ABK25132.1| unknown [Picea sitchensis]
          Length = 368

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = -1

Query: 747 LCSDCASDEDARRSNSFPVPGTSTE---VQVSTEGVHTGTAKSCCWSPDGSLLAIASYDS 577
           + + C+ D+  R   + P P T++     +   E  HT T +SC WSP+G LLA AS+D+
Sbjct: 43  MLASCSGDKTVRIWENTPTPNTTSSSWACKAVLEETHTRTVRSCAWSPNGKLLATASFDA 102

Query: 576 TISIWEKIGND 544
           T +IWE +G +
Sbjct: 103 TTAIWENVGGE 113


>ref|XP_002525318.1| phd finger transcription factor, putative [Ricinus communis]
           gi|223535377|gb|EEF37051.1| phd finger transcription
           factor, putative [Ricinus communis]
          Length = 209

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = -1

Query: 795 SCMGMTIDEAKMLEQFLCSDCASDEDARRS-NSFPVPGTSTEVQV 664
           SCMGMTI+EAK L+ FLCSDC+SD+DA+RS N+FPV   S E +V
Sbjct: 166 SCMGMTIEEAKKLDHFLCSDCSSDDDAKRSLNAFPV-SPSVEAKV 209


>ref|XP_002321145.1| ebs-bah-phd domain-containing protein [Populus trichocarpa]
           gi|222861918|gb|EEE99460.1| ebs-bah-phd
           domain-containing protein [Populus trichocarpa]
          Length = 216

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = -1

Query: 795 SCMGMTIDEAKMLEQFLCSDCASDEDARRS-NSFPVPGTSTEVQVSTE 655
           SCMGMTI+EAK  + FLCSDC+SD+DA+RS N FPV   S EV+V T+
Sbjct: 166 SCMGMTIEEAKKSDHFLCSDCSSDDDAKRSLNVFPV-SPSLEVKVETK 212


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
           gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 349

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 37/66 (56%)
 Frame = -1

Query: 741 SDCASDEDARRSNSFPVPGTSTEVQVSTEGVHTGTAKSCCWSPDGSLLAIASYDSTISIW 562
           + C+ D+  R     P    S + +   E  HT T +SC WSP G LLA AS+D+T +IW
Sbjct: 42  ASCSGDKTVRIWEQSP-SSCSFDCKAVLEETHTRTVRSCAWSPSGKLLATASFDATTAIW 100

Query: 561 EKIGND 544
           E IG D
Sbjct: 101 ENIGGD 106


Top