BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005173
         (1282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   355   2e-95
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   352   1e-94
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...   350   3e-94
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   349   1e-93
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   332   2e-88

>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  355 bits (910), Expect = 2e-95
 Identities = 184/243 (75%), Positives = 199/243 (81%), Gaps = 1/243 (0%)
 Frame = +3

Query: 168 LHRFTSTYGSSIFPS-KRFKLPGASVYAQAKRSLSTKDVEVASAADLYFESPLAIVEYPD 344
           LHRF S   S  F S  RF+LP   V  QAKR  S K+  +AS ADL FE+PL IVEYPD
Sbjct: 33  LHRFCSP--SRFFSSANRFRLPLMQVQVQAKRGFSFKEEVIASPADLSFEAPLKIVEYPD 90

Query: 345 PILRAKNKRIDTFDDNLKKLVVEMFDIMYKTDGIGLSAPQVGLNVQLMVFNPVGERGEGE 524
           PILRAKNK I TFDDNLKKLV EMFD+MYKTDGIGLSAPQVG+NVQLMVFNPVGERGEGE
Sbjct: 91  PILRAKNKLISTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGE 150

Query: 525 EIVLVNPRVTKYSKKMVLFDEGCLSFPGIYADVKRPGSVKIDARDVTGVRFAFSLSELPA 704
           EIVLVNPRV KYSKK+VLF+EGCLSFPGIYADV+RP SVKIDARD+TG RF  +LS LPA
Sbjct: 151 EIVLVNPRVNKYSKKIVLFNEGCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPA 210

Query: 705 RVFQHEFDHLQGILFFDRMTNEVLDRVRPQLQALEKKYEDKTGQPSPERIDTFKVEKVPV 884
           RVFQHEFDHLQG LFFDRMT EVLD +   LQ LE+KYED+TG PSPERI+T K  KV  
Sbjct: 211 RVFQHEFDHLQGTLFFDRMTEEVLDSIHANLQDLERKYEDRTGFPSPERIETRKRRKVAA 270

Query: 885 GFG 893
           GFG
Sbjct: 271 GFG 273


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  352 bits (903), Expect = 1e-94
 Identities = 181/246 (73%), Positives = 206/246 (83%), Gaps = 1/246 (0%)
 Frame = +3

Query: 159 FRQLHRFTSTYGSSIFP-SKRFKLPGASVYAQAKRSLSTKDVEVASAADLYFESPLAIVE 335
           FR+L  F+ST    +F  S +FK P   VYAQAKR  S K+ +VAS+ DL FE+PL IVE
Sbjct: 29  FRRLSGFSST--CKLFSHSSKFKAPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVE 86

Query: 336 YPDPILRAKNKRIDTFDDNLKKLVVEMFDIMYKTDGIGLSAPQVGLNVQLMVFNPVGERG 515
           YPDPILRAKNKRI +FDDNLKKLV EMFD+MYKTDGIGLSAPQVG+NVQLMVFN VGERG
Sbjct: 87  YPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERG 146

Query: 516 EGEEIVLVNPRVTKYSKKMVLFDEGCLSFPGIYADVKRPGSVKIDARDVTGVRFAFSLSE 695
           EGEEIVLVNP+V +YSKK VLF+EGCLSFP IYADV+RP S+KIDARD++G RF  +LS 
Sbjct: 147 EGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSG 206

Query: 696 LPARVFQHEFDHLQGILFFDRMTNEVLDRVRPQLQALEKKYEDKTGQPSPERIDTFKVEK 875
           L ARVFQHEFDHLQG LFFDRMT+EVL+ +RPQLQALEKKYED+TG PSPERI+ F+  K
Sbjct: 207 LSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIENFR-RK 265

Query: 876 VPVGFG 893
           V  GFG
Sbjct: 266 VGAGFG 271


>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
           gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
           trichocarpa]
          Length = 258

 Score =  350 bits (899), Expect = 3e-94
 Identities = 180/247 (72%), Positives = 201/247 (81%)
 Frame = +3

Query: 153 CHFRQLHRFTSTYGSSIFPSKRFKLPGASVYAQAKRSLSTKDVEVASAADLYFESPLAIV 332
           C   +L RF+ST        K+ + P   V +QAKR    K  +VA+ +DL FE+PL IV
Sbjct: 18  CEPIRLARFSSTM-------KQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIV 70

Query: 333 EYPDPILRAKNKRIDTFDDNLKKLVVEMFDIMYKTDGIGLSAPQVGLNVQLMVFNPVGER 512
           EYPDPILRAKNKRID+FDDNLKKLV EMFD+MYKTDGIGLSAPQVG+NVQLMVFNP  E 
Sbjct: 71  EYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEH 130

Query: 513 GEGEEIVLVNPRVTKYSKKMVLFDEGCLSFPGIYADVKRPGSVKIDARDVTGVRFAFSLS 692
           GEG+EIVLVNPRV KYSKK VLF+EGCLSFPGIYADVKRP SVKIDARD+ G RF  +LS
Sbjct: 131 GEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLS 190

Query: 693 ELPARVFQHEFDHLQGILFFDRMTNEVLDRVRPQLQALEKKYEDKTGQPSPERIDTFKVE 872
            LPARVFQHEFDHLQGILFFDRMT EVLD +RP LQALEKKYEDKTG PSPERI+T +++
Sbjct: 191 GLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLK 250

Query: 873 KVPVGFG 893
           KV  GFG
Sbjct: 251 KVAAGFG 257


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  349 bits (895), Expect = 1e-93
 Identities = 182/257 (70%), Positives = 204/257 (79%), Gaps = 6/257 (2%)
 Frame = +3

Query: 141 ILLRCHFRQL------HRFTSTYGSSIFPSKRFKLPGASVYAQAKRSLSTKDVEVASAAD 302
           +LL   FRQ        RF     ++ F S   K P   V AQAKRS S K+ E+A+ AD
Sbjct: 25  LLLPVLFRQTGFSCNNFRFNQLSSTARFSSIA-KPPSIPVRAQAKRSFSFKEEEIATPAD 83

Query: 303 LYFESPLAIVEYPDPILRAKNKRIDTFDDNLKKLVVEMFDIMYKTDGIGLSAPQVGLNVQ 482
           L FE PL IVEYPDPILR KNKRIDTFDDNLKKLV EMFD+MYKTDGIGLSAPQVG+NVQ
Sbjct: 84  LCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQ 143

Query: 483 LMVFNPVGERGEGEEIVLVNPRVTKYSKKMVLFDEGCLSFPGIYADVKRPGSVKIDARDV 662
           LMVFNPVGERGEGEEIVL+NPR+ KYSKK+V F+EGCLSFPGIYADV RP SVKIDARD+
Sbjct: 144 LMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDI 203

Query: 663 TGVRFAFSLSELPARVFQHEFDHLQGILFFDRMTNEVLDRVRPQLQALEKKYEDKTGQPS 842
            G RF  +LS LPARVFQHE+DHL+GILFFDRMT+EVLD +R QLQALEKK+EDKTG  S
Sbjct: 204 NGARFTVNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGYAS 263

Query: 843 PERIDTFKVEKVPVGFG 893
           PE+I+T K +K   GFG
Sbjct: 264 PEKIETRKTKKAAAGFG 280


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  332 bits (850), Expect = 2e-88
 Identities = 169/244 (69%), Positives = 198/244 (81%), Gaps = 2/244 (0%)
 Frame = +3

Query: 168 LHRFTSTYGSSIFPSKRFKLPGASVYAQAKRSLS--TKDVEVASAADLYFESPLAIVEYP 341
           LHR+ S      F +   K P  +VYAQA+R LS  TK  E+A+ ADL F  PL IVEYP
Sbjct: 35  LHRYKSA-NCLFFSASSNKPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYP 93

Query: 342 DPILRAKNKRIDTFDDNLKKLVVEMFDIMYKTDGIGLSAPQVGLNVQLMVFNPVGERGEG 521
           DPILRAKNKRID FD NLKKLV EMFDIMYKTDGIGLSAPQVG+NVQLMVFN  GERGEG
Sbjct: 94  DPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEG 153

Query: 522 EEIVLVNPRVTKYSKKMVLFDEGCLSFPGIYADVKRPGSVKIDARDVTGVRFAFSLSELP 701
           EEIVLVNPRV++YS++++ ++EGCLSFP I+ DVKRP SVK+DA+D+ G RF  SLS LP
Sbjct: 154 EEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALP 213

Query: 702 ARVFQHEFDHLQGILFFDRMTNEVLDRVRPQLQALEKKYEDKTGQPSPERIDTFKVEKVP 881
           ARVFQHEFDHLQG+LFFD+MT+EVLD +R +L ALEKKYED+TG P+PE I+T K++K  
Sbjct: 214 ARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAA 273

Query: 882 VGFG 893
           VGFG
Sbjct: 274 VGFG 277