BLASTX nr result
ID: Cnidium21_contig00005153
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00005153
(2131 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 280 3e-91
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 219 2e-70
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp.... 119 4e-24
ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3] gi... 89 6e-23
gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33] gi|1... 74 3e-21
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 280 bits (715), Expect(2) = 3e-91
Identities = 133/136 (97%), Positives = 135/136 (99%)
Frame = +2
Query: 1538 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 1717
YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG
Sbjct: 935 YRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPG 994
Query: 1718 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRVTHPF 1897
RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPR+THPF
Sbjct: 995 RVSVPVWLIIRKDQLSIIGLVSLYLTNYLILRRLIKQRFLAFFRIWPELFGRFPRITHPF 1054
Query: 1898 ATLFSTLLTSWARQAT 1945
ATLFST+ TSWARQAT
Sbjct: 1055 ATLFSTVPTSWARQAT 1070
Score = 84.3 bits (207), Expect(2) = 3e-91
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +1
Query: 1951 LGASFPSVQLPENNVRLACVKHIASVPSEPGSNSSFEYDFAL 2076
LGASFPS QLPENNVRLACVKHIASVPSEPGSNSSFEYD+AL
Sbjct: 1073 LGASFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWAL 1114
Score = 164 bits (414), Expect(2) = 2e-65
Identities = 81/97 (83%), Positives = 82/97 (84%)
Frame = +2
Query: 1061 QVLLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPQAECFTR*LGP*SA*TK 1240
QV LFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTP+ TK
Sbjct: 845 QVFLFICQGLVRFCALYRIKPHAPPLVQAPVNSFEFRSCDRTPE--------------TK 890
Query: 1241 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 1351
GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF
Sbjct: 891 GEHSSFTAWTTRVSNPVRSPCFRTPASVGTQRAAFAF 927
Score = 114 bits (285), Expect(2) = 2e-65
Identities = 60/79 (75%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = +1
Query: 775 ALAAIKLKRTLESAS--KGAGYLLTDSTATCWHXXXXXXXXXXXXXHFGCKDFLLRRMSQ 948
+LAAIK +RTLESAS KGAG LLTDSTATCWH HFGCKDFLLRRMSQ
Sbjct: 765 SLAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLLRRMSQ 824
Query: 949 QHKTRVSLVIGLDQTSHDT 1005
QHKTRVSLVIGLDQTSHDT
Sbjct: 825 QHKTRVSLVIGLDQTSHDT 843
Score = 78.2 bits (191), Expect(2) = 2e-14
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = +2
Query: 524 LFVSEPFWRGVLNPLRTTPPGGSPECRVFLCRQLDVVVTCK 646
LF S FWRGVLNPLRTTPPGGSPECRVFL RQLDVV+TCK
Sbjct: 705 LFRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCK 745
Score = 29.3 bits (64), Expect(2) = 2e-14
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +3
Query: 507 VRHAPFCLFRSR 542
+RHAPFCLFRSR
Sbjct: 698 LRHAPFCLFRSR 709
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 154 bits (388), Expect(4) = 2e-70
Identities = 82/107 (76%), Positives = 84/107 (78%)
Frame = -2
Query: 1950 LKVACLAQEVRRVENKVANGCVTRGNLPNSSGQILKKAKKRCXXXXXXXXXXXXXXLTKP 1771
+KVACLAQEV VENKVANGCV RGNLPNSSGQILKKAKK LTKP
Sbjct: 117 VKVACLAQEVGTVENKVANGCVMRGNLPNSSGQILKKAKK----------------LTKP 160
Query: 1770 MMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNIA*VKKG 1630
MMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNI + G
Sbjct: 161 MMLSWSFRMISHTGTETRPGLPRGAAVGNLGQWAKARSSNICAIMTG 207
Score = 86.3 bits (212), Expect(4) = 2e-70
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -3
Query: 2075 RAKSYSKEEFDPGSEGTLAICLTHASRTLFSGSWTEGKEAPS 1950
RA+SYSKEEFDPGSEGTLAICLTHASRTLFSGSW EGKEAPS
Sbjct: 75 RAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKEAPS 116
Score = 71.6 bits (174), Expect(4) = 2e-70
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = -1
Query: 1600 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 1499
CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR
Sbjct: 202 CAIMTGLEEEAPANSVPAAAVRRGGQVFFGMTGR 235
Score = 25.0 bits (53), Expect(4) = 2e-70
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1
Query: 2104 YARFTRFYH 2078
YARFTRFYH
Sbjct: 65 YARFTRFYH 73
Score = 219 bits (559), Expect = 2e-54
Identities = 117/154 (75%), Positives = 118/154 (76%)
Frame = -2
Query: 1359 GTPKAKAALWVPTDAGVRKHGERTGLDTLVVHAVNDECSPLVYADQGPS*RVKHSAWGVR 1180
GTPKAKAALWVPTDAGVRKH ERTGLDTLVVHAVNDECSPLVY DQGP
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287
Query: 1179 SQDRNSKELTGACTSGGACGLIRYNAQNLTSP*HMNNKTCP*WDGTYFHTGAAWLSSARV 1000
+RNSKELTGACTSGGACGLIRYNAQNLTS AAWLSSARV
Sbjct: 288 --NRNSKELTGACTSGGACGLIRYNAQNLTS--------------------AAWLSSARV 325
Query: 999 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 898
VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 326 VRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359
Score = 126 bits (317), Expect(3) = 3e-48
Identities = 56/56 (100%), Positives = 56/56 (100%)
Frame = -2
Query: 384 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLV 217
GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLV
Sbjct: 417 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLV 472
Score = 60.5 bits (145), Expect(3) = 3e-48
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = -3
Query: 551 PAKTAPKQTKRCVPHSRRTASDILEEGGDDV 459
P +TAPKQTKRC+PHSR TASDILEEGGDDV
Sbjct: 391 PKQTAPKQTKRCMPHSRGTASDILEEGGDDV 421
Score = 54.7 bits (130), Expect(3) = 3e-48
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = -3
Query: 125 VHTARHTLGIGFARSIGPMITHDFC 51
VHTARHTLGIGFARSI PMITHDFC
Sbjct: 487 VHTARHTLGIGFARSIRPMITHDFC 511
>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
gi|40795104|gb|AAR91148.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 111
Score = 119 bits (297), Expect = 4e-24
Identities = 67/124 (54%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Frame = -2
Query: 594 GEPPGGVVRSGFST---PRQNGSETNKKVRAALTKDCQ*YTGGRWG*RXXXXXXXXXXXX 424
G+PPGGVVRSG ST P+Q K C ++ G
Sbjct: 23 GQPPGGVVRSGNSTRPAPKQR-------------KRCVPHSRGT---------------- 53
Query: 423 XXXXXXXXXXXXXGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQL 244
GGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQL
Sbjct: 54 ------ASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQL 107
Query: 243 GNMK 232
GNMK
Sbjct: 108 GNMK 111
>ref|ZP_04645459.1| pG1 protein [Lactobacillus jensenii 269-3]
gi|238832245|gb|EEQ24559.1| pG1 protein [Lactobacillus
jensenii 269-3]
Length = 174
Score = 88.6 bits (218), Expect(2) = 6e-23
Identities = 55/121 (45%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = +2
Query: 1457 RLSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFLESCHDRAL-------DERA 1615
RLS T +A FT YRGCWH VSR F ++ +A
Sbjct: 54 RLSHQTYQSACARFTPNKSGQRLPPTYYRGCWHVVSRDFLVDYRQIKASYYLYPSSPTTE 113
Query: 1616 LQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVPVWLIIRKDQLSIIGLVSLYLT 1795
L FFTHA LL + F HC RFPTAA R S GRVSVP+W I +L II LVS YLT
Sbjct: 114 LYDPKTFFTHAALLHQTFVHCGRFPTAASRRSLGRVSVPMWPISLSTRLCIIALVSRYLT 173
Query: 1796 N 1798
N
Sbjct: 174 N 174
Score = 47.4 bits (111), Expect(2) = 6e-23
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = +1
Query: 1300 MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRA 1440
MLS SV PES LR W S + LRI PLH +F SPL HS VS A
Sbjct: 1 MLSSLSVSYRPESRLRHWCSSIYLRIPPLHMEFRSPLLHSRLTVSDA 47
>gb|ABP91180.1| unknown protein [Streptococcus suis 98HAH33]
gi|145690754|gb|ABP91259.1| unknown protein
[Streptococcus suis 98HAH33] gi|145690985|gb|ABP91490.1|
unknown protein [Streptococcus suis 98HAH33]
gi|145691080|gb|ABP91585.1| unknown protein
[Streptococcus suis 98HAH33]
Length = 186
Score = 73.6 bits (179), Expect(4) = 3e-21
Identities = 40/69 (57%), Positives = 45/69 (65%)
Frame = +3
Query: 1236 PRANTHRLRHGLPGYLIPFAPHAFAPQRR*GPRELPSLLAFLRRSPDFTPTHEIPLSSVS 1415
P +THRLR GLPGYLI FAPHAF PQR+ RE S FL S FT TH IPLS +
Sbjct: 23 PTPSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPLSPPVFLHISTHFTATHGIPLSPSA 82
Query: 1416 LK*IGFESI 1442
LK F+S+
Sbjct: 83 LKFDSFQSV 91
Score = 38.1 bits (87), Expect(4) = 3e-21
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1
Query: 1633 LLHSRDIAGSGFRPLSKIPHCCPP 1704
LLHSR +A SG PL KIP+CC P
Sbjct: 163 LLHSRGVARSGLPPLPKIPYCCLP 186
Score = 32.0 bits (71), Expect(4) = 3e-21
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = +2
Query: 1460 LSLSTRFTAYVPFTXXXXXXXXXXXXYRGCWHGVSRGFFL 1579
L L T TA FT YRGCWH VSR F +
Sbjct: 98 LLLQTYQTACARFTPNKSGQRSGPTYYRGCWHVVSRPFLV 137
Score = 26.2 bits (56), Expect(4) = 3e-21
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1174 LRPYSPGGVFHALAGPL 1224
+R YSPGGV +ALA L
Sbjct: 1 MRSYSPGGVLNALAAAL 17