BLASTX nr result

ID: Cnidium21_contig00005133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005133
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...   182   8e-44
ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...   181   2e-43
ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycin...   175   1e-41
ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycin...   174   2e-41
emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]     172   6e-41

>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score =  182 bits (462), Expect = 8e-44
 Identities = 95/125 (76%), Positives = 103/125 (82%), Gaps = 2/125 (1%)
 Frame = -3

Query: 639 MASLATFAAVQP--VKGLGETSLAGTKLNIKPSRLTCRPTNFKAGAVVAKYGDKSVYFDL 466
           MASLATFAAVQP  VKGLG +SL GTKL++KPSR + RP N + GAV AKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDL 60

Query: 465 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYVSST 286
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR           GSTLAY+S+T
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYLSAT 120

Query: 285 ATGDV 271
           ATGDV
Sbjct: 121 ATGDV 125


>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score =  181 bits (459), Expect = 2e-43
 Identities = 92/125 (73%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
 Frame = -3

Query: 639 MASLATFAAVQP--VKGLGETSLAGTKLNIKPSRLTCRPTNFKAGAVVAKYGDKSVYFDL 466
           MASLATFAAVQP  +KGLG +SL+GTKL++KPSR   RP + ++GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDL 60

Query: 465 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYVSST 286
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR           GSTLAY S+T
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 285 ATGDV 271
           A+GD+
Sbjct: 121 ASGDI 125


>ref|NP_001241299.1| uncharacterized protein LOC100811201 [Glycine max]
           gi|255626535|gb|ACU13612.1| unknown [Glycine max]
          Length = 144

 Score =  175 bits (443), Expect = 1e-41
 Identities = 90/125 (72%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -3

Query: 639 MASLATFAAVQP--VKGLGETSLAGTKLNIKPSRLTCRPTNFKAGAVVAKYGDKSVYFDL 466
           MASLAT AAVQP  + GL  +SL+GTKL+ KPSR T +  NF++GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPAALNGLAGSSLSGTKLSFKPSRHTVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 465 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYVSST 286
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR           GSTLAY S+T
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 285 ATGDV 271
           A+GD+
Sbjct: 121 ASGDI 125


>ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max]
           gi|255627007|gb|ACU13848.1| unknown [Glycine max]
          Length = 144

 Score =  174 bits (441), Expect = 2e-41
 Identities = 89/125 (71%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -3

Query: 639 MASLATFAAVQP--VKGLGETSLAGTKLNIKPSRLTCRPTNFKAGAVVAKYGDKSVYFDL 466
           MASLAT AAVQP  + GL  +SL+GTKL+ KPSR + +  NF++GAVVAKYGDKSVYFDL
Sbjct: 1   MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDL 60

Query: 465 EDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYVSST 286
           EDLGNTTGQWDLYGSDAPSPY P+QSKFFETFAAPFTKR           GSTLAY S+T
Sbjct: 61  EDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSAT 120

Query: 285 ATGDV 271
           A+GD+
Sbjct: 121 ASGDI 125


>emb|CAA43841.1| photosystem I psaH protein [Nicotiana sylvestris]
          Length = 145

 Score =  172 bits (437), Expect = 6e-41
 Identities = 90/126 (71%), Positives = 99/126 (78%), Gaps = 3/126 (2%)
 Frame = -3

Query: 639 MASLATFAAVQP---VKGLGETSLAGTKLNIKPSRLTCRPTNFKAGAVVAKYGDKSVYFD 469
           MASLA FAAVQP   VKGL  +S+ GTKL++K SRL  +PT  +AG VVAKYGDKSVYFD
Sbjct: 1   MASLAAFAAVQPTTNVKGLAGSSITGTKLHLKSSRLNLKPTKSRAGPVVAKYGDKSVYFD 60

Query: 468 LEDLGNTTGQWDLYGSDAPSPYPPIQSKFFETFAAPFTKRXXXXXXXXXXXGSTLAYVSS 289
           LEDLGNTTGQWDLYGSDAPSPY  +QSKFFETFAAPFTKR           GSTLAY SS
Sbjct: 61  LEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSS 120

Query: 288 TATGDV 271
           TA+GD+
Sbjct: 121 TASGDI 126


Top