BLASTX nr result

ID: Cnidium21_contig00005105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005105
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]   208   8e-52
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   200   3e-49
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   182   8e-44
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   178   9e-43
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   178   1e-42

>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score =  208 bits (530), Expect = 8e-52
 Identities = 124/252 (49%), Positives = 149/252 (59%), Gaps = 9/252 (3%)
 Frame = -3

Query: 733 PQYRTFRSGMGPQPVFTGIVELADIMFHGEPAKNXXXXXXXXXXXXXXXXXXXXKQDATL 554
           PQY TFRSG+G  PVFTG VELA I F GEPAKN                    K+ A+ 
Sbjct: 104 PQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASS 163

Query: 553 XXXXXXXXXXXQIRIARALLNYRLKEKMGTTSSTGAPVPFQKKFPILYPRATSPHPPASA 374
                      QI IARALLNYRLKEKM   +S    + F KKFPI   R  SP  P  A
Sbjct: 164 SSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVA 223

Query: 373 TTSRILSLIGQKTIPQNRSASLKSVDCHSQQLQHQLP---------EIHSSHSKKFPSAG 221
           T S+IL LI QKT P+NR  S  + D   QQ Q + P         ++ +   ++FP+AG
Sbjct: 224 T-SKILPLICQKTPPRNRPPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAG 282

Query: 220 AAPYVPYRQFRTPYHGIAQPVIMRTAVPAYASPPLVCPPHMIQPRGMQIAPPVHIRQSVV 41
           A PYVP RQFRTPYHGIA PV +R AVP +++PP   PP +I+   M+IAPPV +RQ+V 
Sbjct: 283 AVPYVPIRQFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVIRAPHMRIAPPVCVRQAVP 342

Query: 40  AFSAPPVRKEDP 5
            F+APPVRKEDP
Sbjct: 343 VFAAPPVRKEDP 354


>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
           vinifera]
          Length = 413

 Score =  200 bits (508), Expect = 3e-49
 Identities = 121/262 (46%), Positives = 149/262 (56%), Gaps = 19/262 (7%)
 Frame = -3

Query: 733 PQYRTFRSGMGPQPVFTGIVELADIMFHGEPAKNXXXXXXXXXXXXXXXXXXXXKQDATL 554
           PQY TFRSG+G  PVFTG VELA I F GEPAKN                    K+ A  
Sbjct: 104 PQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANS 163

Query: 553 XXXXXXXXXXXQIRIARALLNYRLKEKMGTTSSTGAPVPFQKKFPILYPRATSPHPPASA 374
                      QI IARALLNYRLKEKM   +S    + F KKFPI   R  SP  P  A
Sbjct: 164 SSETENNDELEQITIARALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVA 223

Query: 373 TTSRILSLIGQKTIPQNR------------SASLKSVDCHSQQLQHQLP-------EIHS 251
           T S+IL LI QKT P+NR            S+  +S    +   ++ +P       ++ +
Sbjct: 224 T-SKILPLICQKTPPRNRPPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRA 282

Query: 250 SHSKKFPSAGAAPYVPYRQFRTPYHGIAQPVIMRTAVPAYASPPLVCPPHMIQPRGMQIA 71
              ++FP+AGA PYVP RQFRTPYHGIA PV +R AVP +++PP   PP +I+   M+IA
Sbjct: 283 VRPQRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVIRAPHMRIA 342

Query: 70  PPVHIRQSVVAFSAPPVRKEDP 5
           PPV +RQ+V  F+APPVRKEDP
Sbjct: 343 PPVCVRQAVPVFAAPPVRKEDP 364


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  182 bits (461), Expect = 8e-44
 Identities = 116/252 (46%), Positives = 145/252 (57%), Gaps = 9/252 (3%)
 Frame = -3

Query: 733 PQYRTFRSGMGPQPVFTGIVELADIMFHGEPAKNXXXXXXXXXXXXXXXXXXXXKQDATL 554
           PQY TFRSG+G  PVFTG VELA IMF GEPAKN                    K+ A  
Sbjct: 104 PQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARS 163

Query: 553 XXXXXXXXXXXQIRIARALLNYRLKEKMGTTSSTGAPVPFQKKFPILYPRATSPHPPASA 374
                      QI IARALLNYRLKEK+ + S++ APVPF KKF I  PR TSP PP +A
Sbjct: 164 STEPENNDELEQITIARALLNYRLKEKI-SMSNSNAPVPFPKKFQIQNPRPTSPQPPPAA 222

Query: 373 TTSRILSLIGQKTIPQNR-----SASLKSVDCHSQQLQHQLPEIHSSHSKKFPSAGAAPY 209
            TS+IL LI QK  P++R     S +  S D  +       PE       KFP+AGAAPY
Sbjct: 223 -TSKILPLICQKAAPRSRHLVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPY 281

Query: 208 VPYRQFRTPYHGIAQPVIMRTAVPAYASPPLVC--PPHMIQPRGMQIAPPVHIRQSVVAF 35
           VP RQ R P  G+A PV +RTA+P ++ PP        +++   +++APPV IRQ+V  F
Sbjct: 282 VPIRQMR-PCQGMAPPVTIRTAIPVFSPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVF 340

Query: 34  SA--PPVRKEDP 5
           +   PP+RK++P
Sbjct: 341 ATPPPPIRKDEP 352


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  178 bits (452), Expect = 9e-43
 Identities = 120/257 (46%), Positives = 148/257 (57%), Gaps = 14/257 (5%)
 Frame = -3

Query: 733 PQYRTFRSGMGPQPVFTGIVELADIMFHGEPAKNXXXXXXXXXXXXXXXXXXXXKQDATL 554
           PQY TFRSG+G  PVFTG VELA IMF GEPAKN                    K+ A  
Sbjct: 104 PQYFTFRSGLGHLPVFTGTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARS 163

Query: 553 XXXXXXXXXXXQIRIARALLNYRLKEKMGTTSSTGAPVPFQKKFPILYPRATSPHPPASA 374
                      QI IARALLNYRLKEK+ + S++ APVPF KKF I  PR TSP PP  A
Sbjct: 164 STEPENNDELEQITIARALLNYRLKEKI-SMSNSNAPVPFPKKFQIQNPRPTSPQPP-PA 221

Query: 373 TTSRILSLIGQKTIPQNRS--ASLKSVDCHSQQLQHQLPEIHSSHS---KKFPSAGAAPY 209
           TTS+IL LI QK   ++R   A+  +       +  QLP    S      KFP+AGAAPY
Sbjct: 222 TTSKILPLICQKGAHRSRHLVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPY 281

Query: 208 VPYRQFRTPYHGIAQPVIMRTAVPAYASPPLVCPP-------HMIQPRGMQIAPPVHIRQ 50
           VP RQ R P  G+A PV +RTA+P ++ PP   PP        +++   +++APPV IRQ
Sbjct: 282 VPIRQMR-PCQGMAPPVTIRTAIPVFSPPP---PPAAAAVSHQVLRAPHVRVAPPVTIRQ 337

Query: 49  SVVAFSA--PPVRKEDP 5
           +V  F+A  PPVRK++P
Sbjct: 338 AVPVFAAPPPPVRKDEP 354


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
           Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  178 bits (451), Expect = 1e-42
 Identities = 119/261 (45%), Positives = 146/261 (55%), Gaps = 18/261 (6%)
 Frame = -3

Query: 733 PQYRTFRSGMGPQPVFTGIVELADIMFHGEPAKNXXXXXXXXXXXXXXXXXXXXKQDATL 554
           PQY T+RSG+G  PVFTGIVELA I F GEPAKN                    K+ A+ 
Sbjct: 104 PQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASS 163

Query: 553 XXXXXXXXXXXQIRIARALLNYRLKEKMGTTSSTGAPVPFQKKFPILYPRATSPHPPASA 374
                      QI IARALLNYRLKEKM + S+  A +PFQKKF I   R TS   P  A
Sbjct: 164 STEPENNDELEQITIARALLNYRLKEKM-SMSNPNARIPFQKKFQIQNIRPTSSQSP--A 220

Query: 373 TTSRILSLIGQKTIPQNR---------------SASLKSVDCHSQQLQHQLPEIHSSHSK 239
           TTS+IL LI QKT P+NR                A+  S     QQ Q    E   +   
Sbjct: 221 TTSKILPLICQKTGPRNRPSSATPNENPRSRHPQAAATSDKSILQQPQSSAIESRVTRPL 280

Query: 238 KFPSAGAAPYVPYRQFRTPYHGIAQPVIMRTAVPAYASPPLVCPP---HMIQPRGMQIAP 68
           +FP+AGA PYVP RQ R P HGIA  V +RT +P +++PPL  P     +I+   ++IAP
Sbjct: 281 RFPAAGAPPYVPIRQMR-PCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAP 339

Query: 67  PVHIRQSVVAFSAPPVRKEDP 5
           PV IRQ+V  F+APP+RK++P
Sbjct: 340 PVSIRQAVPVFAAPPLRKDEP 360


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