BLASTX nr result
ID: Cnidium21_contig00005104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00005104
(2177 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16818.3| unnamed protein product [Vitis vinifera] 98 6e-40
ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245... 98 6e-40
emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera] 97 2e-39
ref|XP_004135501.1| PREDICTED: uncharacterized protein LOC101216... 89 2e-32
ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|35... 90 4e-31
>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 98.2 bits (243), Expect(3) = 6e-40
Identities = 43/66 (65%), Positives = 56/66 (84%)
Frame = +2
Query: 1979 NGKLENRDTYVERVRSCMKLYGALVQTEAEGVKKPHGIEEGWAWIARFLNALPANLTTAV 2158
NGK+E + Y++R+ MKLY ALVQTEA+GVK PHG++EGWAW+ARFLNALPAN+ TAV
Sbjct: 534 NGKIERTEDYLKRLACYMKLYAALVQTEADGVKNPHGLKEGWAWLARFLNALPANVYTAV 593
Query: 2159 SLKAFI 2176
+L+ F+
Sbjct: 594 ALEVFL 599
Score = 72.8 bits (177), Expect(3) = 6e-40
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 1731 STTIFAEKIVS--QCVNPSGSFSKSVYAYAQVIILVTSQVPQTMDILLAELNRVFIYIVP 1904
+ IF +K+VS + PS K YA VI+ V SQVP MD+LLAEL+RV IY VP
Sbjct: 453 NVAIFVKKVVSYFEVDQPS----KVTYACGHVIVFVASQVPYAMDLLLAELHRVCIYTVP 508
Query: 1905 KCMSYFESIFKTKEACYKAIGYH*E 1979
K + Y +S FK+KE YK IGY E
Sbjct: 509 KHIDYSKSAFKSKEDYYKMIGYREE 533
Score = 42.7 bits (99), Expect(3) = 6e-40
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1
Query: 1570 AGTFLKGAESALKLEEQRSQIYKEVAAEAEALRRNMRKSNRTHHTSSNQQIHDPVQQFLR 1749
AG LK AESALKLE++R Q YKE + +AL ++ K + H QQF R
Sbjct: 372 AGNILKSAESALKLEQERLQKYKEFDEKTQALGQSSNKDFQRHE-----------QQFAR 420
Query: 1750 R 1752
R
Sbjct: 421 R 421
>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
Length = 680
Score = 98.2 bits (243), Expect(3) = 6e-40
Identities = 43/66 (65%), Positives = 56/66 (84%)
Frame = +2
Query: 1979 NGKLENRDTYVERVRSCMKLYGALVQTEAEGVKKPHGIEEGWAWIARFLNALPANLTTAV 2158
NGK+E + Y++R+ MKLY ALVQTEA+GVK PHG++EGWAW+ARFLNALPAN+ TAV
Sbjct: 513 NGKIERTEDYLKRLACYMKLYAALVQTEADGVKNPHGLKEGWAWLARFLNALPANVYTAV 572
Query: 2159 SLKAFI 2176
+L+ F+
Sbjct: 573 ALEVFL 578
Score = 72.8 bits (177), Expect(3) = 6e-40
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 1731 STTIFAEKIVS--QCVNPSGSFSKSVYAYAQVIILVTSQVPQTMDILLAELNRVFIYIVP 1904
+ IF +K+VS + PS K YA VI+ V SQVP MD+LLAEL+RV IY VP
Sbjct: 432 NVAIFVKKVVSYFEVDQPS----KVTYACGHVIVFVASQVPYAMDLLLAELHRVCIYTVP 487
Query: 1905 KCMSYFESIFKTKEACYKAIGYH*E 1979
K + Y +S FK+KE YK IGY E
Sbjct: 488 KHIDYSKSAFKSKEDYYKMIGYREE 512
Score = 42.7 bits (99), Expect(3) = 6e-40
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1
Query: 1570 AGTFLKGAESALKLEEQRSQIYKEVAAEAEALRRNMRKSNRTHHTSSNQQIHDPVQQFLR 1749
AG LK AESALKLE++R Q YKE + +AL ++ K + H QQF R
Sbjct: 351 AGNILKSAESALKLEQERLQKYKEFDEKTQALGQSSNKDFQRHE-----------QQFAR 399
Query: 1750 R 1752
R
Sbjct: 400 R 400
>emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]
Length = 745
Score = 96.7 bits (239), Expect(3) = 2e-39
Identities = 42/66 (63%), Positives = 56/66 (84%)
Frame = +2
Query: 1979 NGKLENRDTYVERVRSCMKLYGALVQTEAEGVKKPHGIEEGWAWIARFLNALPANLTTAV 2158
NGK+E + Y++R+ MKLY ALVQTEA+GV+ PHG++EGWAW+ARFLNALPAN+ TAV
Sbjct: 578 NGKIERTEDYLKRLAXYMKLYAALVQTEADGVQNPHGLKEGWAWLARFLNALPANVYTAV 637
Query: 2159 SLKAFI 2176
+L+ F+
Sbjct: 638 ALEVFL 643
Score = 72.8 bits (177), Expect(3) = 2e-39
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 1731 STTIFAEKIVS--QCVNPSGSFSKSVYAYAQVIILVTSQVPQTMDILLAELNRVFIYIVP 1904
+ IF +K+VS + PS K YA VI+ V SQVP MD+LLAEL+RV IY VP
Sbjct: 497 NVAIFVKKVVSYFEVDQPS----KVTYACGHVIVFVASQVPYAMDLLLAELHRVCIYTVP 552
Query: 1905 KCMSYFESIFKTKEACYKAIGYH*E 1979
K + Y +S FK+KE YK IGY E
Sbjct: 553 KHIDYSKSAFKSKEDYYKMIGYREE 577
Score = 42.7 bits (99), Expect(3) = 2e-39
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +1
Query: 1570 AGTFLKGAESALKLEEQRSQIYKEVAAEAEALRRNMRKSNRTHHTSSNQQIHDPVQQFLR 1749
AG LK AESALKLE++R Q YKE + +AL ++ K + H QQF R
Sbjct: 416 AGNILKSAESALKLEQERLQKYKEFDEKTQALGQSSNKDFQRHE-----------QQFAR 464
Query: 1750 R 1752
R
Sbjct: 465 R 465
>ref|XP_004135501.1| PREDICTED: uncharacterized protein LOC101216938 [Cucumis sativus]
Length = 641
Score = 89.0 bits (219), Expect(3) = 2e-32
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = +2
Query: 1979 NGKLENRDTYVERVRSCMKLYGALVQTEAEGVKKPHGIEEGWAWIARFLNALPANLTTAV 2158
+GK+E+ + Y+ R+ + +KLYGAL+QTE GV+ HG+EEGWAW+ARFLNA+P NL TA
Sbjct: 484 DGKMESVEDYLMRLEAYVKLYGALIQTEIPGVRNLHGLEEGWAWLARFLNAIPPNLFTAA 543
Query: 2159 SLKAFI 2176
SL AF+
Sbjct: 544 SLNAFL 549
Score = 71.2 bits (173), Expect(3) = 2e-32
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +3
Query: 1731 STTIFAEKIVSQCVNPSGSFSKSVYAYAQVIILVTSQVPQTMDILLAELNRVFIYIVPKC 1910
S FA+KIVSQC +P +F A + VI+LVTSQ P + ++LAEL+R IY VPK
Sbjct: 406 SIAAFAKKIVSQCESPHDAF-----ALSHVIVLVTSQAPSALVLVLAELHRACIYTVPKH 460
Query: 1911 MSYFESIFKTKEACYKAIGY 1970
+ Y + F +KE+ YK IG+
Sbjct: 461 IQYSAAAFGSKESYYKTIGF 480
Score = 28.1 bits (61), Expect(3) = 2e-32
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 1576 TFLKGAESALKLEEQRSQIYKEVAAEAEALRRNMRKSNRTH 1698
+ ++ ++SAL LE +R Q KEV +ALR + K T+
Sbjct: 327 SMVRASKSALALERERLQQLKEVEEGNQALRLSPNKDFNTY 367
>ref|XP_003601886.1| Nucleoporin GLE1 [Medicago truncatula] gi|355490934|gb|AES72137.1|
Nucleoporin GLE1 [Medicago truncatula]
Length = 599
Score = 89.7 bits (221), Expect(2) = 4e-31
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +2
Query: 1979 NGKLENRDTYVERVRSCMKLYGALVQTEAEGVKKPHGIEEGWAWIARFLNALPANLTTAV 2158
NGKLE+ + Y++R+ S MK+YGALVQTE ++ HG++EGWAW+AR LN+LPAN TAV
Sbjct: 460 NGKLESTEDYLKRLESYMKVYGALVQTEIPNIQNLHGLQEGWAWLARLLNSLPANQYTAV 519
Query: 2159 SLKAFI 2176
SL AF+
Sbjct: 520 SLNAFL 525
Score = 73.9 bits (180), Expect(2) = 4e-31
Identities = 37/80 (46%), Positives = 55/80 (68%)
Frame = +3
Query: 1731 STTIFAEKIVSQCVNPSGSFSKSVYAYAQVIILVTSQVPQTMDILLAELNRVFIYIVPKC 1910
S + +K+V C +P+ + +A A VI+L+TSQVP MDILLAEL+ +Y VPK
Sbjct: 381 SVEMLVKKVVLSCASPASA----PFAIASVIVLITSQVPYVMDILLAELHTACLYTVPKH 436
Query: 1911 MSYFESIFKTKEACYKAIGY 1970
+ Y +SIF++KEA +++IGY
Sbjct: 437 LVYKKSIFQSKEAYFRSIGY 456