BLASTX nr result

ID: Cnidium21_contig00005102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005102
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF16869.1|AF109693_1 allergen-like protein BRSn20 [Sambucus ...   214   8e-54
ref|XP_002268073.1| PREDICTED: pollen-specific protein C13 isofo...   214   1e-53
gb|ABC86745.1| pollen-specific protein [Vitis pseudoreticulata]       211   9e-53
ref|XP_003634471.1| PREDICTED: pollen-specific protein C13-like ...   208   8e-52
ref|XP_002513885.1| Pollen-specific protein C13 precursor, putat...   202   5e-50

>gb|AAF16869.1|AF109693_1 allergen-like protein BRSn20 [Sambucus nigra]
          Length = 159

 Score =  214 bits (546), Expect = 8e-54
 Identities = 104/161 (64%), Positives = 126/161 (78%)
 Frame = +2

Query: 149 MARLVILMLLCVLPAIATARFLHRQKPFVVQGRIYCDTCRAGFETSATTYIPGARVRIEC 328
           MARL++L+ L  LP + +AR +    PF+++G +YCDTCRAGFET AT Y+ GARVRIEC
Sbjct: 1   MARLILLVALSFLPLLTSARLIGN--PFLLKGSVYCDTCRAGFETDATKYLHGARVRIEC 58

Query: 329 KDRKTLELTYSIEGVTDSTGTYKLTVADDHYDQMCDAMLVSSPDPLCSEPNLGRDKSRVI 508
           KDR TL LTYS E VTDS G Y + V+DDH DQMCDA+LVSSPDP C+ P+ GRD++ VI
Sbjct: 59  KDRDTLRLTYSDEAVTDSKGKYSVLVSDDHGDQMCDAILVSSPDPECAVPDKGRDRACVI 118

Query: 509 LTRSNGMNSDTRFANNMGFLKNEPMAKCTEVLQMYLQTDED 631
           LTRSNGM SD RFAN MGFLKNEPMA CT++LQ Y   ++D
Sbjct: 119 LTRSNGMTSDERFANAMGFLKNEPMAGCTQILQKYQLNEDD 159


>ref|XP_002268073.1| PREDICTED: pollen-specific protein C13 isoform 1 [Vitis vinifera]
           gi|359496552|ref|XP_003635264.1| PREDICTED:
           pollen-specific protein C13 isoform 2 [Vitis vinifera]
           gi|296086870|emb|CBI33037.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score =  214 bits (544), Expect = 1e-53
 Identities = 102/161 (63%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
 Frame = +2

Query: 149 MARLVILMLLCVLPA-IATARFLHRQKPFVVQGRIYCDTCRAGFETSATTYIPGARVRIE 325
           MA+L++ + LC+L   ++ AR +  +KPFV+ GR+YCDTCRAGFETSATTYI GARVRIE
Sbjct: 1   MAKLLMSIALCLLLVYVSEARPM--RKPFVLHGRVYCDTCRAGFETSATTYIAGARVRIE 58

Query: 326 CKDRKTLELTYSIEGVTDSTGTYKLTVADDHYDQMCDAMLVSSPDPLCSEPNLGRDKSRV 505
           CKDR +L+L YS+EGVTDSTGTYK ++ADDH DQMCDA+LV SP P C++ + GRD+SR+
Sbjct: 59  CKDRNSLQLVYSVEGVTDSTGTYKFSIADDHGDQMCDAVLVKSPQPDCAKVDAGRDRSRL 118

Query: 506 ILTRSNGMNSDTRFANNMGFLKNEPMAKCTEVLQMYLQTDE 628
            LTRSNG+ SDTRFAN MGF+K+EP + CT++L+ Y ++D+
Sbjct: 119 SLTRSNGLVSDTRFANAMGFMKDEPASGCTQLLKQYQESDD 159


>gb|ABC86745.1| pollen-specific protein [Vitis pseudoreticulata]
          Length = 159

 Score =  211 bits (537), Expect = 9e-53
 Identities = 99/160 (61%), Positives = 131/160 (81%)
 Frame = +2

Query: 149 MARLVILMLLCVLPAIATARFLHRQKPFVVQGRIYCDTCRAGFETSATTYIPGARVRIEC 328
           M RL++L+ LCVLPA+ +A     Q PFV+QGR+YCDTCRAGFETSATTYI GA+VR+EC
Sbjct: 1   MGRLMLLVALCVLPALVSAGRPVSQ-PFVLQGRVYCDTCRAGFETSATTYIAGAKVRVEC 59

Query: 329 KDRKTLELTYSIEGVTDSTGTYKLTVADDHYDQMCDAMLVSSPDPLCSEPNLGRDKSRVI 508
           KDR +++L YSIEG+TDSTGTYK+ V +DH DQ+CDA+LVSSP   C+  + GRD++ VI
Sbjct: 60  KDRNSMQLLYSIEGITDSTGTYKIMVTEDHEDQLCDAVLVSSPQSDCASVDPGRDRAAVI 119

Query: 509 LTRSNGMNSDTRFANNMGFLKNEPMAKCTEVLQMYLQTDE 628
           LTR NG+ SD R+AN+MGFLK+ PM++CT++LQ Y + ++
Sbjct: 120 LTRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED 159


>ref|XP_003634471.1| PREDICTED: pollen-specific protein C13-like [Vitis vinifera]
           gi|147801295|emb|CAN61642.1| hypothetical protein
           VITISV_029644 [Vitis vinifera]
           gi|302141929|emb|CBI19132.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score =  208 bits (529), Expect = 8e-52
 Identities = 98/160 (61%), Positives = 130/160 (81%)
 Frame = +2

Query: 149 MARLVILMLLCVLPAIATARFLHRQKPFVVQGRIYCDTCRAGFETSATTYIPGARVRIEC 328
           M RL++L+ LCVLPA+ +A     Q PFV+QGR+YCDTCRAGFETSATTYI GA+VR+EC
Sbjct: 1   MGRLMLLVALCVLPALVSAGRPVSQ-PFVLQGRVYCDTCRAGFETSATTYIAGAKVRVEC 59

Query: 329 KDRKTLELTYSIEGVTDSTGTYKLTVADDHYDQMCDAMLVSSPDPLCSEPNLGRDKSRVI 508
           KDR +++L YSIEG+TDSTGTYK+ V +D  DQ+CDA+LVSSP   C+  + GRD++ VI
Sbjct: 60  KDRNSMQLLYSIEGITDSTGTYKIMVTEDREDQLCDAVLVSSPQSDCASVDPGRDRAAVI 119

Query: 509 LTRSNGMNSDTRFANNMGFLKNEPMAKCTEVLQMYLQTDE 628
           LTR NG+ SD R+AN+MGFLK+ PM++CT++LQ Y + ++
Sbjct: 120 LTRYNGIVSDNRYANSMGFLKDHPMSECTQLLQQYQEFED 159


>ref|XP_002513885.1| Pollen-specific protein C13 precursor, putative [Ricinus communis]
           gi|223546971|gb|EEF48468.1| Pollen-specific protein C13
           precursor, putative [Ricinus communis]
          Length = 159

 Score =  202 bits (513), Expect = 5e-50
 Identities = 94/160 (58%), Positives = 126/160 (78%)
 Frame = +2

Query: 149 MARLVILMLLCVLPAIATARFLHRQKPFVVQGRIYCDTCRAGFETSATTYIPGARVRIEC 328
           MAR ++L+ LCVLPA+  A    R  PF V+GR+YCDTCRAGFETS TTY+ GA+VR+EC
Sbjct: 1   MARAILLLALCVLPALVAAARPARN-PFEVEGRVYCDTCRAGFETSKTTYVAGAKVRVEC 59

Query: 329 KDRKTLELTYSIEGVTDSTGTYKLTVADDHYDQMCDAMLVSSPDPLCSEPNLGRDKSRVI 508
           KDRKT+EL YS EG TDSTGTY++ V +DH DQ+CDAMLVSSP   C +P+ GRD++RVI
Sbjct: 60  KDRKTMELVYSKEGTTDSTGTYRIHVDEDHQDQLCDAMLVSSPQHDCMKPSSGRDRARVI 119

Query: 509 LTRSNGMNSDTRFANNMGFLKNEPMAKCTEVLQMYLQTDE 628
           LT +NG+ S+ R+AN++GF+K + M+ C E+L+ Y + ++
Sbjct: 120 LTNNNGIVSNKRYANSIGFMKEDAMSGCFELLRQYQEYED 159


Top