BLASTX nr result

ID: Cnidium21_contig00005098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005098
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2...    74   1e-27
emb|CBI18871.3| unnamed protein product [Vitis vinifera]               74   1e-27
ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|2...    72   3e-26
ref|XP_002510657.1| nucleotide binding protein, putative [Ricinu...    74   4e-26
gb|AAF80608.1|AC069251_1 F2D10.2 [Arabidopsis thaliana]                73   8e-26

>ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2 [Vitis vinifera]
          Length = 351

 Score = 73.9 bits (180), Expect(3) = 1e-27
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +1

Query: 1147 FDQRIFSTLFSSGESHGAVICKIPKLYGKLNFPQFEEIASLDAHKSKPKCL 1299
            +DQR+FST+FSSGES+GA + +IP+LYG+LN PQ E IA LDAH  K KC+
Sbjct: 76   YDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHACKIKCI 126



 Score = 62.0 bits (149), Expect(3) = 1e-27
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +2

Query: 1052 VHLIRLSSTGTELVIEGLFSHPYEIWDLASCP 1147
            VHLIRLSS GTEL+ EGLFSHP EIWDLASCP
Sbjct: 44   VHLIRLSSGGTELICEGLFSHPNEIWDLASCP 75



 Score = 35.0 bits (79), Expect(3) = 1e-27
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 921 DHTTFITATLSLKKENEVSI 980
           DHT+FIT TLSLK+ENEV +
Sbjct: 27  DHTSFITGTLSLKEENEVHL 46


>emb|CBI18871.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 73.9 bits (180), Expect(3) = 1e-27
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +1

Query: 1147 FDQRIFSTLFSSGESHGAVICKIPKLYGKLNFPQFEEIASLDAHKSKPKCL 1299
            +DQR+FST+FSSGES+GA + +IP+LYG+LN PQ E IA LDAH  K KC+
Sbjct: 76   YDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHACKIKCI 126



 Score = 62.0 bits (149), Expect(3) = 1e-27
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +2

Query: 1052 VHLIRLSSTGTELVIEGLFSHPYEIWDLASCP 1147
            VHLIRLSS GTEL+ EGLFSHP EIWDLASCP
Sbjct: 44   VHLIRLSSGGTELICEGLFSHPNEIWDLASCP 75



 Score = 35.0 bits (79), Expect(3) = 1e-27
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +3

Query: 921 DHTTFITATLSLKKENEVSI 980
           DHT+FIT TLSLK+ENEV +
Sbjct: 27  DHTSFITGTLSLKEENEVHL 46


>ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|222857230|gb|EEE94777.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score = 72.4 bits (176), Expect(3) = 3e-26
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +1

Query: 1147 FDQRIFSTLFSSGESHGAVICKIPKLYGKLNFPQFEEIASLDAHKSKPKCL 1299
            FDQRIFST+FS+GES GA + +IP+LYG+LN PQ E IASLD H  K  C+
Sbjct: 76   FDQRIFSTVFSTGESFGAAVWQIPELYGQLNSPQLERIASLDGHVGKVNCI 126



 Score = 60.1 bits (144), Expect(3) = 3e-26
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 1052 VHLIRLSSTGTELVIEGLFSHPYEIWDLASCP 1147
            VHL+RLSS GTEL+ EGLFSHP EIWDL+SCP
Sbjct: 44   VHLLRLSSGGTELICEGLFSHPNEIWDLSSCP 75



 Score = 33.9 bits (76), Expect(3) = 3e-26
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +3

Query: 921 DHTTFITATLSLKKENEVSI 980
           DHT+FIT TLSL++ENEV +
Sbjct: 27  DHTSFITGTLSLREENEVHL 46


>ref|XP_002510657.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223551358|gb|EEF52844.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 340

 Score = 73.6 bits (179), Expect(3) = 4e-26
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +1

Query: 1147 FDQRIFSTLFSSGESHGAVICKIPKLYGKLNFPQFEEIASLDAHKSKPKCL 1299
            FDQRIFST+FS+GES+GA + +IP+LYG+LN PQ E+IASLDAH     C+
Sbjct: 76   FDQRIFSTVFSTGESYGAAVWQIPELYGQLNSPQLEKIASLDAHSGNINCV 126



 Score = 59.3 bits (142), Expect(3) = 4e-26
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 1052 VHLIRLSSTGTELVIEGLFSHPYEIWDLASCP 1147
            VHLIRLSS G+EL+ EGLFSHP EIWDL+SCP
Sbjct: 44   VHLIRLSSGGSELICEGLFSHPNEIWDLSSCP 75



 Score = 33.1 bits (74), Expect(3) = 4e-26
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 921 DHTTFITATLSLKKENEVSI 980
           DHT+F+T TLSL++ENEV +
Sbjct: 27  DHTSFLTGTLSLREENEVHL 46


>gb|AAF80608.1|AC069251_1 F2D10.2 [Arabidopsis thaliana]
          Length = 370

 Score = 73.2 bits (178), Expect(3) = 8e-26
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +1

Query: 1147 FDQRIFSTLFSSGESHGAVICKIPKLYGKLNFPQFEEIASLDAHKSKPKCL 1299
            FDQRIFST+FS+GES GA I +IP+LYG+LN PQ E +ASLDAH  K  C+
Sbjct: 104  FDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHVGKINCV 154



 Score = 59.7 bits (143), Expect(3) = 8e-26
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +2

Query: 1052 VHLIRLSSTGTELVIEGLFSHPYEIWDLASCP 1147
            VHL+RLSS G+EL+ EGLFSHP EIWDLASCP
Sbjct: 72   VHLLRLSSGGSELICEGLFSHPNEIWDLASCP 103



 Score = 32.0 bits (71), Expect(3) = 8e-26
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 921 DHTTFITATLSLKKENEVSI 980
           D+T+F+T TLSLK+ENEV +
Sbjct: 55  DYTSFLTGTLSLKEENEVHL 74


Top