BLASTX nr result

ID: Cnidium21_contig00005073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005073
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528106.1| mitochondrial inner membrane protease subuni...    56   8e-17
ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane prot...    54   2e-15
ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|2...    55   7e-15
gb|AFK44255.1| unknown [Lotus japonicus]                               52   2e-13
ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane prot...    53   5e-13

>ref|XP_002528106.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223532495|gb|EEF34285.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 170

 Score = 56.2 bits (134), Expect(2) = 8e-17
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -2

Query: 128 SMSPTFNPHCSTSVKTYSADRVLVEKLCLDKYKFSLGDVVVF 3
           SMSPTFNP  ST   ++  D VLVEK CL+KY+FS GDVVVF
Sbjct: 38  SMSPTFNPGTSTFWGSFIDDCVLVEKFCLEKYRFSHGDVVVF 79



 Score = 55.5 bits (132), Expect(2) = 8e-17
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = -1

Query: 324 MKRLNFLWNVSKNFFTCGIIGLTISDRYISIVPIRG 217
           M   NFLW+++K +FT G+IG+TISDRY SIVP+RG
Sbjct: 1   MASSNFLWSLAKKYFTVGLIGITISDRYASIVPVRG 36


>ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane protease subunit 2-like
           [Cucumis sativus] gi|449483475|ref|XP_004156603.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           2-like [Cucumis sativus]
          Length = 184

 Score = 54.3 bits (129), Expect(2) = 2e-15
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = -2

Query: 128 SMSPTFNPHCSTSVKTYSADRVLVEKLCLDKYKFSLGDVVVF 3
           SMSPTFNP  ++     + D VLVEK CL+KYKFS GDV+V+
Sbjct: 38  SMSPTFNPIATSLTGPMTGDYVLVEKFCLEKYKFSPGDVIVY 79



 Score = 52.4 bits (124), Expect(2) = 2e-15
 Identities = 24/36 (66%), Positives = 27/36 (75%)
 Frame = -1

Query: 324 MKRLNFLWNVSKNFFTCGIIGLTISDRYISIVPIRG 217
           M   N +WNV K  FT GIIG+TISDRY S+VPIRG
Sbjct: 1   MANRNLVWNVVKKSFTFGIIGVTISDRYASVVPIRG 36


>ref|XP_002323574.1| predicted protein [Populus trichocarpa] gi|222868204|gb|EEF05335.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 55.1 bits (131), Expect(2) = 7e-15
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = -2

Query: 128 SMSPTFNPHCSTSVKTYSADRVLVEKLCLDKYKFSLGDVVVF 3
           SMSPTFNP  +T + +   DRVL+EK CL KYKFS GDVVVF
Sbjct: 38  SMSPTFNPRTNTVLGSLD-DRVLIEKFCLAKYKFSHGDVVVF 78



 Score = 50.1 bits (118), Expect(2) = 7e-15
 Identities = 19/32 (59%), Positives = 27/32 (84%)
 Frame = -1

Query: 312 NFLWNVSKNFFTCGIIGLTISDRYISIVPIRG 217
           + LWN++K + T G+IGLTI+DRY S+VP+RG
Sbjct: 5   SLLWNLTKKYLTVGVIGLTITDRYASVVPVRG 36


>gb|AFK44255.1| unknown [Lotus japonicus]
          Length = 173

 Score = 52.0 bits (123), Expect(2) = 2e-13
 Identities = 26/42 (61%), Positives = 29/42 (69%)
 Frame = -2

Query: 128 SMSPTFNPHCSTSVKTYSADRVLVEKLCLDKYKFSLGDVVVF 3
           SMSPTFNP   + +   S D V VEK CL KYKFS GDV+VF
Sbjct: 38  SMSPTFNPKTHSLMGGVSDDCVFVEKFCLQKYKFSHGDVMVF 79



 Score = 48.1 bits (113), Expect(2) = 2e-13
 Identities = 18/31 (58%), Positives = 26/31 (83%)
 Frame = -1

Query: 309 FLWNVSKNFFTCGIIGLTISDRYISIVPIRG 217
           FLWN +K F T G+I +T+SDRY+++VP+RG
Sbjct: 6   FLWNFTKKFVTFGLISVTVSDRYMTVVPVRG 36


>ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane protease subunit 2 [Vitis
           vinifera] gi|297740215|emb|CBI30397.3| unnamed protein
           product [Vitis vinifera]
          Length = 170

 Score = 53.1 bits (126), Expect(2) = 5e-13
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = -2

Query: 128 SMSPTFNPHCSTSVKTYSADRVLVEKLCLDKYKFSLGDVVVF 3
           SM PTFNP+  T + + + D VL+EK CL+KYKFS GDV+ F
Sbjct: 38  SMYPTFNPNARTFMGSLTDDYVLLEKFCLEKYKFSHGDVIAF 79



 Score = 45.8 bits (107), Expect(2) = 5e-13
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = -1

Query: 312 NFLWNVSKNFFTCGIIGLTISDRYISIVPIRG 217
           NFLW+  K  FT G+IGLTISDRY SI  ++G
Sbjct: 5   NFLWDFGKKCFTFGLIGLTISDRYASIAHVQG 36


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