BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005048
         (1366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chl...   408   e-111
ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, ch...   389   e-106
emb|CBI28372.3| unnamed protein product [Vitis vinifera]              389   e-105
sp|Q7XAB8.1|THF1_SOLTU RecName: Full=Protein THYLAKOID FORMATION...   385   e-104
gb|ABV24460.1| chloroplast-localized protein [Nicotiana benthami...   384   e-104

>ref|XP_002275686.2| PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Vitis
            vinifera]
          Length = 299

 Score =  408 bits (1049), Expect = e-111
 Identities = 217/299 (72%), Positives = 245/299 (81%), Gaps = 2/299 (0%)
 Frame = -1

Query: 1234 MAAVTSLSFAALTSPSSSDRKLSVSSTH-LVSNFDACRFRLN-QSCDMIGXXXXXXXXXX 1061
            MAAVTSLSF+AL    SS+RK+ V +T    S F+A RFR N  +  +            
Sbjct: 1    MAAVTSLSFSALGQ--SSERKVPVPTTRSFASAFEAFRFRANFYAVGVRSSSSSSSSRMV 58

Query: 1060 XXXXXXSTDVPTVSQTKANFLQAYKRPIPSIYNTVLQELIVQQHLMRYKRTHCYDAVFAL 881
                   TDVPTVS+TK NFL+ YKRPIPSIYNT+LQEL+VQQHLMRYKRT+ YDAVFAL
Sbjct: 59   VQCMSSVTDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFAL 118

Query: 880  GFVTVYDRLMEGYPSDEDREAIFRAYIKALQEDPEQYRSDAQKLEEWARSQTASTLIDFS 701
            GFVTVYD+LM+GYPSDEDR+ IF+ YIKAL+EDPEQYR DAQ LEEWARSQTAS+L++FS
Sbjct: 119  GFVTVYDQLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFS 178

Query: 700  TKEGDVESILKDIAERARTKESFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKR 521
            +KEG+VE ILKDIAERA  K SFSYSRFFAIGLFRLLELANATEPT+LEKLCAA NI KR
Sbjct: 179  SKEGEVEGILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKR 238

Query: 520  SVDRDLDVYRNLLTKLVQAKELLKEYVEREKKKAEERTGSQAANEAVTKCLGEHQYLGL 344
            SVDRDLDVYRNLLTKLVQAKELLKEYV+REKKK EER  SQ ANEA+TKCLGE++Y G+
Sbjct: 239  SVDRDLDVYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGEYEYTGV 297


>ref|XP_004136805.1| PREDICTED: protein THYLAKOID FORMATION 1, chloroplastic-like [Cucumis
            sativus] gi|449493105|ref|XP_004159194.1| PREDICTED:
            protein THYLAKOID FORMATION 1, chloroplastic-like
            [Cucumis sativus]
          Length = 298

 Score =  389 bits (1000), Expect = e-106
 Identities = 208/294 (70%), Positives = 239/294 (81%), Gaps = 2/294 (0%)
 Frame = -1

Query: 1234 MAAVTSLSFAALTSPSSSDRKLSV-SSTHLVSNFDACRFRLNQSCDMIGXXXXXXXXXXX 1058
            MAAV S+SF+ L     SDR+L + SS    SNF    FR +                  
Sbjct: 1    MAAVNSISFSTLNQ--CSDRRLLLPSSRSHSSNFHGFPFRTSVFTHYSRVRASTFSSRMV 58

Query: 1057 XXXXXS-TDVPTVSQTKANFLQAYKRPIPSIYNTVLQELIVQQHLMRYKRTHCYDAVFAL 881
                 + TDV TV++TK NFL+AYKRPIPSIYNTVLQELIVQQHLMRYKRT+ YD VFAL
Sbjct: 59   IHCMSAGTDVTTVAETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRTYRYDPVFAL 118

Query: 880  GFVTVYDRLMEGYPSDEDREAIFRAYIKALQEDPEQYRSDAQKLEEWARSQTASTLIDFS 701
            GFVTVYD+LMEGYPSDEDREAIF+AYIKAL EDPEQYR DA+K EEWARSQTA++L++F+
Sbjct: 119  GFVTVYDQLMEGYPSDEDREAIFQAYIKALNEDPEQYRIDAKKFEEWARSQTAASLVEFA 178

Query: 700  TKEGDVESILKDIAERARTKESFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKR 521
            ++EG+VESILKDIAERA +K +FSYSRFFAIGLFRLLELANATEP++LEKLCAALNIDK+
Sbjct: 179  SREGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANATEPSILEKLCAALNIDKK 238

Query: 520  SVDRDLDVYRNLLTKLVQAKELLKEYVEREKKKAEERTGSQAANEAVTKCLGEH 359
             VDRDLDVYRNLL+KLVQAKELLKEYV+REKKK +ER GSQ ANEA+TKCLGE+
Sbjct: 239  GVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTANEAITKCLGEY 292


>emb|CBI28372.3| unnamed protein product [Vitis vinifera]
          Length = 243

 Score =  389 bits (998), Expect = e-105
 Identities = 193/232 (83%), Positives = 214/232 (92%)
 Frame = -1

Query: 1039 TDVPTVSQTKANFLQAYKRPIPSIYNTVLQELIVQQHLMRYKRTHCYDAVFALGFVTVYD 860
            TDVPTVS+TK NFL+ YKRPIPSIYNT+LQEL+VQQHLMRYKRT+ YDAVFALGFVTVYD
Sbjct: 10   TDVPTVSETKMNFLKNYKRPIPSIYNTLLQELMVQQHLMRYKRTYRYDAVFALGFVTVYD 69

Query: 859  RLMEGYPSDEDREAIFRAYIKALQEDPEQYRSDAQKLEEWARSQTASTLIDFSTKEGDVE 680
            +LM+GYPSDEDR+ IF+ YIKAL+EDPEQYR DAQ LEEWARSQTAS+L++FS+KEG+VE
Sbjct: 70   QLMDGYPSDEDRDIIFQVYIKALREDPEQYRKDAQMLEEWARSQTASSLVEFSSKEGEVE 129

Query: 679  SILKDIAERARTKESFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKRSVDRDLD 500
             ILKDIAERA  K SFSYSRFFAIGLFRLLELANATEPT+LEKLCAA NI KRSVDRDLD
Sbjct: 130  GILKDIAERAGGKGSFSYSRFFAIGLFRLLELANATEPTILEKLCAAFNISKRSVDRDLD 189

Query: 499  VYRNLLTKLVQAKELLKEYVEREKKKAEERTGSQAANEAVTKCLGEHQYLGL 344
            VYRNLLTKLVQAKELLKEYV+REKKK EER  SQ ANEA+TKCLGE++Y G+
Sbjct: 190  VYRNLLTKLVQAKELLKEYVDREKKKREERVESQKANEAITKCLGEYEYTGV 241


>sp|Q7XAB8.1|THF1_SOLTU RecName: Full=Protein THYLAKOID FORMATION1, chloroplastic; Flags:
            Precursor gi|33469614|gb|AAQ19850.1| light-regulated
            chloroplast-localized protein [Solanum tuberosum]
          Length = 293

 Score =  385 bits (989), Expect = e-104
 Identities = 201/298 (67%), Positives = 242/298 (81%), Gaps = 2/298 (0%)
 Frame = -1

Query: 1234 MAAVTSLSFAALTSPSSSDRKLSVSSTHLVSNFDACRFRLNQSCDMIGXXXXXXXXXXXX 1055
            MAAVTS+SF+A+T   S++RK SVSS+  +  F   RFR N S D +             
Sbjct: 1    MAAVTSVSFSAITQ--SAERKSSVSSSRSIDTF---RFRSNFSFDSVNVRSSNSTSRFVV 55

Query: 1054 XXXXST--DVPTVSQTKANFLQAYKRPIPSIYNTVLQELIVQQHLMRYKRTHCYDAVFAL 881
                S+  D+PTV+ TK  FL AYKRPIP++YNTVLQELIVQQHL RYK+++ YD VFAL
Sbjct: 56   HCTSSSAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFAL 115

Query: 880  GFVTVYDRLMEGYPSDEDREAIFRAYIKALQEDPEQYRSDAQKLEEWARSQTASTLIDFS 701
            GFVTVYD+LMEGYPS+EDR AIF+AYI+AL+EDPEQYR+DAQKLEEWAR+Q A+TL+DFS
Sbjct: 116  GFVTVYDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFS 175

Query: 700  TKEGDVESILKDIAERARTKESFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNIDKR 521
            +KEG++E+I KDIA+RA TK+ F YSR FA+GLFRLLELAN T+PT+LEKLCAALN++K+
Sbjct: 176  SKEGEIENIFKDIAQRAGTKDGFCYSRLFAVGLFRLLELANVTDPTILEKLCAALNVNKK 235

Query: 520  SVDRDLDVYRNLLTKLVQAKELLKEYVEREKKKAEERTGSQAANEAVTKCLGEHQYLG 347
            SVDRDLDVYRNLL+KLVQAKELLKEYVEREKKK  ER  +Q ANE VTKCLG++QY G
Sbjct: 236  SVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-TQKANETVTKCLGDYQYAG 292


>gb|ABV24460.1| chloroplast-localized protein [Nicotiana benthamiana]
          Length = 295

 Score =  384 bits (987), Expect = e-104
 Identities = 201/300 (67%), Positives = 243/300 (81%), Gaps = 4/300 (1%)
 Frame = -1

Query: 1234 MAAVTSLSFAALTSPSSSDRKLSVSSTHLVSNFDACRFRLNQSCDMIGXXXXXXXXXXXX 1055
            MAAVTS+SF+A+    S++RK SVS +  V  F   RFR N S D               
Sbjct: 1    MAAVTSVSFSAIAQ--SAERKSSVSPSRSVDTF---RFRSNVSFDCFNVRSSNSSFSRST 55

Query: 1054 XXXXS----TDVPTVSQTKANFLQAYKRPIPSIYNTVLQELIVQQHLMRYKRTHCYDAVF 887
                     TD+PTV++TK NFL+AYKRPIP++YNTVLQELIVQQHL++YK+++ YD VF
Sbjct: 56   SRFVVHCMSTDLPTVAETKMNFLKAYKRPIPTVYNTVLQELIVQQHLIKYKKSYRYDPVF 115

Query: 886  ALGFVTVYDRLMEGYPSDEDREAIFRAYIKALQEDPEQYRSDAQKLEEWARSQTASTLID 707
            ALGFVTVYD+LMEGYPS+EDR+AIF+AYI+AL EDP QYR+DAQK EEWAR+Q A+TL+D
Sbjct: 116  ALGFVTVYDQLMEGYPSEEDRDAIFKAYIEALNEDPVQYRADAQKFEEWARTQNANTLVD 175

Query: 706  FSTKEGDVESILKDIAERARTKESFSYSRFFAIGLFRLLELANATEPTVLEKLCAALNID 527
            FS+++G+VE+ILKDIA+RA TK+SF YSR FA+GLFRLLELAN T+PT+LEKLCA+LNI+
Sbjct: 176  FSSRDGEVENILKDIAQRAGTKDSFCYSRLFAVGLFRLLELANVTDPTILEKLCASLNIN 235

Query: 526  KRSVDRDLDVYRNLLTKLVQAKELLKEYVEREKKKAEERTGSQAANEAVTKCLGEHQYLG 347
            K+SVDRDLDVYRNLL+KLVQAKELLKEYVEREKKK  ER  SQ ANEAVTKCLG++QY G
Sbjct: 236  KKSVDRDLDVYRNLLSKLVQAKELLKEYVEREKKKRGERE-SQKANEAVTKCLGDYQYAG 294