BLASTX nr result

ID: Cnidium21_contig00005011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005011
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japo...   154   7e-36
ref|NP_199045.1| ubiquitin-like protein 5 [Arabidopsis thaliana]...   152   5e-35
gb|AFK38458.1| unknown [Lotus japonicus]                              152   5e-35
ref|XP_002312015.1| predicted protein [Populus trichocarpa] gi|1...   151   8e-35
ref|XP_004149907.1| PREDICTED: ubiquitin-like protein 5-like iso...   150   1e-34

>gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japonica Group]
          Length = 278

 Score =  154 bits (390), Expect = 7e-36
 Identities = 74/79 (93%), Positives = 75/79 (94%)
 Frame = +1

Query: 4   ERERVKMIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDH 183
           E E  KMIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDH
Sbjct: 200 EEEEEKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDH 259

Query: 184 ITLRDYEIHDGMGLELYYN 240
           ITLRDYEIHDGMGLELYYN
Sbjct: 260 ITLRDYEIHDGMGLELYYN 278


>ref|NP_199045.1| ubiquitin-like protein 5 [Arabidopsis thaliana]
           gi|52000878|sp|Q9FGZ9.1|UBL5_ARATH RecName:
           Full=Ubiquitin-like protein 5
           gi|13899065|gb|AAK48954.1|AF370527_1 ubiquitin-like
           protein [Arabidopsis thaliana]
           gi|10177015|dbj|BAB10203.1| ubiquitin-like protein
           [Arabidopsis thaliana] gi|18377566|gb|AAL66949.1|
           ubiquitin-like protein [Arabidopsis thaliana]
           gi|62318558|dbj|BAD94931.1| ubiquitin-like protein
           [Arabidopsis thaliana] gi|332007410|gb|AED94793.1|
           ubiquitin-like protein 5 [Arabidopsis thaliana]
          Length = 73

 Score =  152 bits (383), Expect = 5e-35
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +1

Query: 22  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 201
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 202 EIHDGMGLELYYN 240
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>gb|AFK38458.1| unknown [Lotus japonicus]
          Length = 73

 Score =  152 bits (383), Expect = 5e-35
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +1

Query: 22  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 201
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLRDY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLRDY 60

Query: 202 EIHDGMGLELYYN 240
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_002312015.1| predicted protein [Populus trichocarpa] gi|118484889|gb|ABK94311.1|
           unknown [Populus trichocarpa]
           gi|222851835|gb|EEE89382.1| predicted protein [Populus
           trichocarpa]
          Length = 73

 Score =  151 bits (381), Expect = 8e-35
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +1

Query: 22  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 201
           M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MLEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 202 EIHDGMGLELYYN 240
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_004149907.1| PREDICTED: ubiquitin-like protein 5-like isoform 1 [Cucumis
           sativus] gi|449464382|ref|XP_004149908.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 2 [Cucumis
           sativus] gi|449490402|ref|XP_004158595.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 1 [Cucumis
           sativus] gi|449490405|ref|XP_004158596.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 2 [Cucumis
           sativus] gi|449490408|ref|XP_004158597.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 3 [Cucumis
           sativus]
          Length = 73

 Score =  150 bits (380), Expect = 1e-34
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +1

Query: 22  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 201
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDY 60

Query: 202 EIHDGMGLELYYN 240
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


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