BLASTX nr result

ID: Cnidium21_contig00005010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00005010
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japo...   157   2e-36
ref|NP_199045.1| ubiquitin-like protein 5 [Arabidopsis thaliana]...   152   6e-35
gb|AFK38458.1| unknown [Lotus japonicus]                              152   6e-35
ref|XP_002312015.1| predicted protein [Populus trichocarpa] gi|1...   151   1e-34
ref|XP_004149907.1| PREDICTED: ubiquitin-like protein 5-like iso...   150   1e-34

>gb|ABA96452.1| GRF zinc finger family protein [Oryza sativa Japonica Group]
          Length = 278

 Score =  157 bits (396), Expect = 2e-36
 Identities = 75/81 (92%), Positives = 77/81 (95%)
 Frame = +3

Query: 3   EREREKVKMIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYK 182
           E E E+ KMIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTR EKIRIQKWYNIYK
Sbjct: 198 EEEEEEEKMIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYK 257

Query: 183 DHITLRDYEIHDGMGLELYYN 245
           DHITLRDYEIHDGMGLELYYN
Sbjct: 258 DHITLRDYEIHDGMGLELYYN 278


>ref|NP_199045.1| ubiquitin-like protein 5 [Arabidopsis thaliana]
           gi|52000878|sp|Q9FGZ9.1|UBL5_ARATH RecName:
           Full=Ubiquitin-like protein 5
           gi|13899065|gb|AAK48954.1|AF370527_1 ubiquitin-like
           protein [Arabidopsis thaliana]
           gi|10177015|dbj|BAB10203.1| ubiquitin-like protein
           [Arabidopsis thaliana] gi|18377566|gb|AAL66949.1|
           ubiquitin-like protein [Arabidopsis thaliana]
           gi|62318558|dbj|BAD94931.1| ubiquitin-like protein
           [Arabidopsis thaliana] gi|332007410|gb|AED94793.1|
           ubiquitin-like protein 5 [Arabidopsis thaliana]
          Length = 73

 Score =  152 bits (383), Expect = 6e-35
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +3

Query: 27  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 206
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 207 EIHDGMGLELYYN 245
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>gb|AFK38458.1| unknown [Lotus japonicus]
          Length = 73

 Score =  152 bits (383), Expect = 6e-35
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = +3

Query: 27  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 206
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLRDY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLRDY 60

Query: 207 EIHDGMGLELYYN 245
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_002312015.1| predicted protein [Populus trichocarpa] gi|118484889|gb|ABK94311.1|
           unknown [Populus trichocarpa]
           gi|222851835|gb|EEE89382.1| predicted protein [Populus
           trichocarpa]
          Length = 73

 Score =  151 bits (381), Expect = 1e-34
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +3

Query: 27  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 206
           M+EVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MLEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 207 EIHDGMGLELYYN 245
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


>ref|XP_004149907.1| PREDICTED: ubiquitin-like protein 5-like isoform 1 [Cucumis
           sativus] gi|449464382|ref|XP_004149908.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 2 [Cucumis
           sativus] gi|449490402|ref|XP_004158595.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 1 [Cucumis
           sativus] gi|449490405|ref|XP_004158596.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 2 [Cucumis
           sativus] gi|449490408|ref|XP_004158597.1| PREDICTED:
           ubiquitin-like protein 5-like isoform 3 [Cucumis
           sativus]
          Length = 73

 Score =  150 bits (380), Expect = 1e-34
 Identities = 71/73 (97%), Positives = 73/73 (100%)
 Frame = +3

Query: 27  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 206
           MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTR+EKIRIQKWYNIYKDHITL+DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRSEKIRIQKWYNIYKDHITLKDY 60

Query: 207 EIHDGMGLELYYN 245
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73


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