BLASTX nr result

ID: Cnidium21_contig00004996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004996
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524505.1| conserved hypothetical protein [Ricinus comm...   178   2e-42
ref|XP_002874253.1| hypothetical protein ARALYDRAFT_489387 [Arab...   176   5e-42
ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   176   5e-42
ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203...   175   1e-41
ref|NP_197918.1| uncharacterized protein [Arabidopsis thaliana] ...   174   2e-41

>ref|XP_002524505.1| conserved hypothetical protein [Ricinus communis]
           gi|223536293|gb|EEF37945.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  178 bits (451), Expect = 2e-42
 Identities = 88/173 (50%), Positives = 106/173 (61%), Gaps = 3/173 (1%)
 Frame = +3

Query: 75  VMICHRSFTDWINHFLDCMGSCFGCCKKSKPVNAADEPSKGLIIDGETVKKAGISDDFWS 254
           ++I + S T WI H L CMG CFGCC K  P+ A DEPSKGL I G  VKK  +SDDFWS
Sbjct: 1   MVILNTSITAWIGHLLACMGGCFGCCAKPTPIIAVDEPSKGLRIQGRAVKKPSVSDDFWS 60

Query: 255 TSTYDLDXXXXXXXXXXXXXXXXXXXX---TGSTSNNSEFVNHGYLRWKQTRLQWRETKS 425
           TST DL+                       T  TS+ SEFVN G+L W+Q+RLQW    +
Sbjct: 61  TSTCDLENSAIQSQRSVSSISVSNANLCIGTSGTSSTSEFVNQGFLLWQQSRLQWTGNNN 120

Query: 426 LENNKAKKKDPVLSWNATYDSLLGTNKRFYKPIPLSEMVEFLVEIWEQEGLYD 584
                  + +  LSWNATY+ LLG+   F +PIPLSEMV+FLV+IWEQEGLYD
Sbjct: 121 SRGKTHYRLEHRLSWNATYEGLLGSRNPFRRPIPLSEMVDFLVDIWEQEGLYD 173


>ref|XP_002874253.1| hypothetical protein ARALYDRAFT_489387 [Arabidopsis lyrata subsp.
           lyrata] gi|297320090|gb|EFH50512.1| hypothetical protein
           ARALYDRAFT_489387 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  176 bits (447), Expect = 5e-42
 Identities = 87/161 (54%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
 Frame = +3

Query: 105 WINHFLDCMGSCFGCCKKSKPVNAADEPSKGLIIDGETVKKAGISDDFWSTSTYDLDXXX 284
           WI     CMG CFGCC K   + A DEPSKGL I G  VKK  +SDDFWSTST ++D   
Sbjct: 10  WIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSDDFWSTSTCEMDNST 69

Query: 285 XXXXXXXXXXXXXXXXXTG-STSNNSEFVNHGYLRWKQTRLQWRETKSLENNKAKKKDPV 461
                            T  STSN +EFVNHG   W QTR QW       + KAK ++P 
Sbjct: 70  LQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWL-ANGTSHKKAKLREPT 128

Query: 462 LSWNATYDSLLGTNKRFYKPIPLSEMVEFLVEIWEQEGLYD 584
           +SWNATY+SLLG NKRF +PIPL EMV+FLV++WEQEGLYD
Sbjct: 129 ISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169


>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  176 bits (447), Expect = 5e-42
 Identities = 85/154 (55%), Positives = 101/154 (65%), Gaps = 5/154 (3%)
 Frame = +3

Query: 138 CFGCCKKSKPVNAADEPSKGLIIDGETVKKAGISDDFWSTSTYDLDXXXXXXXXXXXXXX 317
           C GCC K  P+ A DEPSKGL I G TVKK  IS+DFWSTST ++D              
Sbjct: 7   CLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQRSISSIS 66

Query: 318 XXXXXXT-----GSTSNNSEFVNHGYLRWKQTRLQWRETKSLENNKAKKKDPVLSWNATY 482
                 T     GSTSNNSEF+NHG L W QTRLQW   K  EN   + ++P L WNATY
Sbjct: 67  TSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRLRWNATY 126

Query: 483 DSLLGTNKRFYKPIPLSEMVEFLVEIWEQEGLYD 584
           + LLGTN+RF +PIPLSEM++FLV++WEQEG+YD
Sbjct: 127 EGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|XP_004150590.1| PREDICTED: uncharacterized protein LOC101203426 [Cucumis sativus]
           gi|449523626|ref|XP_004168824.1| PREDICTED:
           uncharacterized LOC101203426 [Cucumis sativus]
          Length = 177

 Score =  175 bits (443), Expect = 1e-41
 Identities = 91/178 (51%), Positives = 109/178 (61%), Gaps = 8/178 (4%)
 Frame = +3

Query: 75  VMICHRSFTDWINHFLDCMGSCFGCCKKSKPVNAADEPSKGLIIDGETVKKAGISDDFWS 254
           +++ + SF  WI+    CMG CFGCC K  P+ A DEPSKGL I G  VKK  ISD FWS
Sbjct: 1   MVMLNSSFAAWISRLFACMGGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWS 60

Query: 255 TSTYDLDXXXXXXXXXXXXXXXXXXXXT-----GSTSNNSEFVNHGYLRWKQTRLQW--- 410
           TST DLD                    +     GS S++SEFVNHG L W QTR+QW   
Sbjct: 61  TSTCDLDNSTIQSQRSISSISTSNLTLSHSNVAGSVSSSSEFVNHGLLLWNQTRMQWIGS 120

Query: 411 RETKSLENNKAKKKDPVLSWNATYDSLLGTNKRFYKPIPLSEMVEFLVEIWEQEGLYD 584
             TK+ +  + ++K  + SW ATYDSLLGT + F  PIPLSEMV FLVE+WEQEGLYD
Sbjct: 121 GTTKTTDETEQRQKAKI-SWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177


>ref|NP_197918.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334187932|ref|NP_001190393.1| uncharacterized protein
           [Arabidopsis thaliana] gi|28973729|gb|AAO64181.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824197|gb|AAP04059.1| unknown protein [Arabidopsis
           thaliana] gi|110736786|dbj|BAF00354.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332006047|gb|AED93430.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332006048|gb|AED93431.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 169

 Score =  174 bits (442), Expect = 2e-41
 Identities = 86/161 (53%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
 Frame = +3

Query: 105 WINHFLDCMGSCFGCCKKSKPVNAADEPSKGLIIDGETVKKAGISDDFWSTSTYDLDXXX 284
           WI     CMG CFGCC K   + A DEPSKGL I G  VKK  +S+DFWSTST ++D   
Sbjct: 10  WIYQLFGCMGGCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNST 69

Query: 285 XXXXXXXXXXXXXXXXXTG-STSNNSEFVNHGYLRWKQTRLQWRETKSLENNKAKKKDPV 461
                            T  STSN +EFVNHG   W QTR QW         KAK ++P 
Sbjct: 70  LQSQRSMSSISFTNNTSTSASTSNPTEFVNHGLNLWNQTRQQWL-ANGTSQKKAKVREPT 128

Query: 462 LSWNATYDSLLGTNKRFYKPIPLSEMVEFLVEIWEQEGLYD 584
           +SWNATY+SLLG NKRF +PIPL EMV+FLV++WEQEGLYD
Sbjct: 129 ISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169


Top