BLASTX nr result

ID: Cnidium21_contig00004989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004989
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloro...   175   5e-42
emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]   175   5e-42
ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   164   8e-39
ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   164   8e-39
gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]   162   5e-38

>ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloroplastic isoform 1
           [Vitis vinifera] gi|359492152|ref|XP_003634370.1|
           PREDICTED: 50S ribosomal protein L31, chloroplastic
           isoform 2 [Vitis vinifera] gi|302142528|emb|CBI19731.3|
           unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  175 bits (444), Expect = 5e-42
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = -1

Query: 552 MSLGLSNTFLQANLPPPSISLKKEVCQTRPYTPRWTCRKPDIHPKFYDDAKVYCNGQLVM 373
           M+L LSNTFLQ  L PP++ +KK     R Y P+WTCRK DIHP+FY+DAKVYCNG+LVM
Sbjct: 1   MALTLSNTFLQRKLSPPTLPIKKANA-VRAYRPQWTCRKKDIHPQFYEDAKVYCNGELVM 59

Query: 372 TTGGTKQEYVVDVWSGNHPFYQGSRSALLLDDDQVEKFRKKFSGLDQIMTIPDLK-GEII 196
           TTGGT++EYVVDVWSGNHPFY G+RS LL+D DQVEKFRKKF  + QIM IP LK GEI+
Sbjct: 60  TTGGTQKEYVVDVWSGNHPFYLGNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIV 119

Query: 195 L 193
           L
Sbjct: 120 L 120


>emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]
          Length = 241

 Score =  175 bits (444), Expect = 5e-42
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = -1

Query: 552 MSLGLSNTFLQANLPPPSISLKKEVCQTRPYTPRWTCRKPDIHPKFYDDAKVYCNGQLVM 373
           M+L LSNTFLQ  L PP++ +KK     R Y P+WTCRK DIHP+FY+DAKVYCNG+LVM
Sbjct: 1   MALTLSNTFLQRKLSPPTLPIKKANA-VRAYRPQWTCRKKDIHPQFYEDAKVYCNGELVM 59

Query: 372 TTGGTKQEYVVDVWSGNHPFYQGSRSALLLDDDQVEKFRKKFSGLDQIMTIPDLK-GEII 196
           TTGGT++EYVVDVWSGNHPFY G+RS LL+D DQVEKFRKKF  + QIM IP LK GEI+
Sbjct: 60  TTGGTQKEYVVDVWSGNHPFYLGNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIV 119

Query: 195 L 193
           L
Sbjct: 120 L 120


>ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score =  164 bits (416), Expect = 8e-39
 Identities = 82/130 (63%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
 Frame = -1

Query: 576 HKIKQTTTMSLGLSNTFLQANLP--PPSISLKKEVCQTRPYTPRWTCRKPDIHPKFYDDA 403
           H  +    M+L L+N+FLQ   P  P     K++    R Y P  TCRK D+HP+FY+DA
Sbjct: 22  HAPQPNAAMALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDA 81

Query: 402 KVYCNGQLVMTTGGTKQEYVVDVWSGNHPFYQGSRSALLLDDDQVEKFRKKFSGLDQIMT 223
           KVYCNG+LVMTTGGT++EY VDVWSGNHPFY GSRSALL+D DQVEKFRKKF  L Q+M 
Sbjct: 82  KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME 141

Query: 222 IPDLKGEIIL 193
           IP LKGEIIL
Sbjct: 142 IPVLKGEIIL 151


>ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score =  164 bits (416), Expect = 8e-39
 Identities = 82/130 (63%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
 Frame = -1

Query: 576 HKIKQTTTMSLGLSNTFLQANLP--PPSISLKKEVCQTRPYTPRWTCRKPDIHPKFYDDA 403
           H  +    M+L L+N+FLQ   P  P     K++    R Y P  TCRK D+HP+FY+DA
Sbjct: 22  HAPQPNAAMALNLTNSFLQLQRPISPAVAPPKRKESGARSYRPVVTCRKKDLHPQFYEDA 81

Query: 402 KVYCNGQLVMTTGGTKQEYVVDVWSGNHPFYQGSRSALLLDDDQVEKFRKKFSGLDQIMT 223
           KVYCNG+LVMTTGGT++EY VDVWSGNHPFY GSRSALL+D DQVEKFRKKF  L Q+M 
Sbjct: 82  KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME 141

Query: 222 IPDLKGEIIL 193
           IP LKGEIIL
Sbjct: 142 IPVLKGEIIL 151


>gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]
          Length = 161

 Score =  162 bits (409), Expect = 5e-38
 Identities = 81/130 (62%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
 Frame = -1

Query: 576 HKIKQTTTMSLGLSNTFLQANLP--PPSISLKKEVCQTRPYTPRWTCRKPDIHPKFYDDA 403
           H  +    M+L L+N+FLQ   P  P     K +    R + P  TCRK D+HP+FY+DA
Sbjct: 20  HSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKESGARSHRPVVTCRKKDLHPQFYEDA 79

Query: 402 KVYCNGQLVMTTGGTKQEYVVDVWSGNHPFYQGSRSALLLDDDQVEKFRKKFSGLDQIMT 223
           KVYCNG+LVMTTGGT++EY VDVWSGNHPFY GSRSALL+D DQVEKFRKKF  L Q+M 
Sbjct: 80  KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME 139

Query: 222 IPDLKGEIIL 193
           IP LKGEIIL
Sbjct: 140 IPVLKGEIIL 149


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