BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004961
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2,...   779   0.0  
dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinc...   769   0.0  
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...   766   0.0  
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   766   0.0  
ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2,...   764   0.0  

>ref|XP_002281484.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic [Vitis
            vinifera]
          Length = 458

 Score =  779 bits (2012), Expect = 0.0
 Identities = 404/476 (84%), Positives = 423/476 (88%), Gaps = 3/476 (0%)
 Frame = -2

Query: 1548 MAFSSSTTC-RIQTPSSSLLVKPYRQSSSFPHLPFCTHKFTVLP--SKPSSISCVLTTKP 1378
            MA S+ T   R QT S   L KPY   SS P LPF   K T  P  +K  SI C L  +P
Sbjct: 1    MAASAKTPISRTQTTS---LYKPY---SSSPQLPFKLLKLTPTPCAAKGLSICCALQMEP 54

Query: 1377 QVMDEENNKNLNGSGLGVLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFKALADDQDF 1198
            +V          G G  V   PDSFGRFGKFGGKYVPETLMHALTELE+AF+AL+ D +F
Sbjct: 55   KV----------GPGSQV---PDSFGRFGKFGGKYVPETLMHALTELESAFRALSGDVEF 101

Query: 1197 QKELDGILKDYVGRESPLYFAERLTEHYKRLNGEGPLIYLKREDLNHTGAHKINNAVAQA 1018
            QKELDGILKDYVGRESPLYFAERLTEHYKR NGEGPLIYLKREDLNHTGAHKINNAVAQA
Sbjct: 102  QKELDGILKDYVGRESPLYFAERLTEHYKRHNGEGPLIYLKREDLNHTGAHKINNAVAQA 161

Query: 1017 LLAKRLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQSLNVFRMRLLGAE 838
            LLAKRLGK RIIAETGAGQHGVATATVCARFGL+CI+YMGAQDMERQ+LNVFRMRLLGAE
Sbjct: 162  LLAKRLGKTRIIAETGAGQHGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAE 221

Query: 837  VRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQ 658
            VRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FHAVIGKETRKQ
Sbjct: 222  VRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 281

Query: 657  ALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDEDVRLIGVEAAGFGLDSGKHAATLTKGE 478
            A+EKWGGKPDVLVACVGGGSNAMGLF+EFVDDEDVRLIGVEAAGFGLDSGKHAATLT+GE
Sbjct: 282  AMEKWGGKPDVLVACVGGGSNAMGLFYEFVDDEDVRLIGVEAAGFGLDSGKHAATLTRGE 341

Query: 477  VGVLHGAMSYLLQDDDGQITEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSITDEEALEA 298
            VGVLHGAMSYLLQDDDGQI EPHSISAGLDYPGVGPEHSFLKD+GRAEY+SITDEEALEA
Sbjct: 342  VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEA 401

Query: 297  FTRLSRLEGIIPALETSHALAYLEKLCPDLPNGTRVVLNCSGRGDKDVHTAIKHLK 130
            F RLSRLEGIIPALETSHALAYLEKLCP LPNGT+VVLNCSGRGDKDVHTAIKHL+
Sbjct: 402  FKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQ 457


>dbj|BAD83779.1| tryptophan synthase beta subunit [Polygonum tinctorium]
          Length = 474

 Score =  769 bits (1986), Expect = 0.0
 Identities = 396/478 (82%), Positives = 418/478 (87%), Gaps = 5/478 (1%)
 Frame = -2

Query: 1548 MAFSSSTTCRIQTPSSSLLVKPYRQSSSFPHLPFCTHKFTVLP-SKPSSISCVLTTKPQV 1372
            MA S+S+  + QT S S L +    +  F      + +F   P S+  SISCV+T     
Sbjct: 1    MAVSTSSALKSQTSSYSSLSQSRLSAFQFSDSHPKSIRFAQKPLSRCPSISCVMTR---- 56

Query: 1371 MDEENNKNLNGSGLG----VLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFKALADDQ 1204
             ++   K+L          +LQRPDSFGRFGKFGGKYVPETLMHAL ELE AF +LA D 
Sbjct: 57   -EDLGAKSLKADAADQEPLLLQRPDSFGRFGKFGGKYVPETLMHALDELETAFHSLATDV 115

Query: 1203 DFQKELDGILKDYVGRESPLYFAERLTEHYKRLNGEGPLIYLKREDLNHTGAHKINNAVA 1024
            +FQKELDGILKDYVGRE+PLYFAERLTEHYKR NGEGP IYLKREDLNHTGAHKINNAVA
Sbjct: 116  EFQKELDGILKDYVGRETPLYFAERLTEHYKRPNGEGPQIYLKREDLNHTGAHKINNAVA 175

Query: 1023 QALLAKRLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQSLNVFRMRLLG 844
            QALLAKRLGK RIIAETGAGQHGVATATVCARFGL+CI+YMGAQDMERQSLNVFRMRLLG
Sbjct: 176  QALLAKRLGKTRIIAETGAGQHGVATATVCARFGLECIVYMGAQDMERQSLNVFRMRLLG 235

Query: 843  AEVRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETR 664
            AEVR VH+GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETR
Sbjct: 236  AEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETR 295

Query: 663  KQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDEDVRLIGVEAAGFGLDSGKHAATLTK 484
            KQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDD+DVRLIGVEAAGFGLDSGKHAATLTK
Sbjct: 296  KQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAATLTK 355

Query: 483  GEVGVLHGAMSYLLQDDDGQITEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSITDEEAL 304
            GEVGVLHGAMSYLLQDDDGQ+ EPHSISAGLDYPGVGPEHSFLKDM RAEYYSITDEEAL
Sbjct: 356  GEVGVLHGAMSYLLQDDDGQVIEPHSISAGLDYPGVGPEHSFLKDMKRAEYYSITDEEAL 415

Query: 303  EAFTRLSRLEGIIPALETSHALAYLEKLCPDLPNGTRVVLNCSGRGDKDVHTAIKHLK 130
            EAF RLSRLEGIIPALETSHALAYLEKLCP L +GTRVVLNCSGRGDKDVHTAIKHLK
Sbjct: 416  EAFRRLSRLEGIIPALETSHALAYLEKLCPTLADGTRVVLNCSGRGDKDVHTAIKHLK 473


>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 472

 Score =  766 bits (1977), Expect = 0.0
 Identities = 386/476 (81%), Positives = 424/476 (89%), Gaps = 3/476 (0%)
 Frame = -2

Query: 1548 MAFSSSTTCRIQTPSSSLLVKPYRQSSSFPHLPFCTHKFTVLPS---KPSSISCVLTTKP 1378
            M  S++  C+I T S S      + SSS  H P    + +  PS   + +++SC LT +P
Sbjct: 1    MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60

Query: 1377 QVMDEENNKNLNGSGLGVLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFKALADDQDF 1198
             +  E+    ++ S L   QRPDSFGRFG+FGGKYVPETLMHALTELE AF +LA DQDF
Sbjct: 61   SLAMEDK---VHDSSLQ--QRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDF 115

Query: 1197 QKELDGILKDYVGRESPLYFAERLTEHYKRLNGEGPLIYLKREDLNHTGAHKINNAVAQA 1018
            QKELDGIL+DYVGRESPLYFAERLTEHY+R NGEGP I+LKREDLNHTGAHKINNAVAQA
Sbjct: 116  QKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQA 175

Query: 1017 LLAKRLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQSLNVFRMRLLGAE 838
            LLAKRLGK+RIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQ+LNVFRM+LLGAE
Sbjct: 176  LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAE 235

Query: 837  VRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQ 658
            VR VH+GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FHAVIGKETRKQ
Sbjct: 236  VRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 295

Query: 657  ALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDEDVRLIGVEAAGFGLDSGKHAATLTKGE 478
            ALEKWGGKPDVLVACVGGGSNAMGLFHEFV+D+DVRL+GVEAAGFGLDSGKHAATLTKGE
Sbjct: 296  ALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGE 355

Query: 477  VGVLHGAMSYLLQDDDGQITEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSITDEEALEA 298
            VGVLHGAMSYLLQDDDGQI EPHSISAGLDYPGVGPEHS+LKD+GRAEY+S+TD+EALEA
Sbjct: 356  VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEA 415

Query: 297  FTRLSRLEGIIPALETSHALAYLEKLCPDLPNGTRVVLNCSGRGDKDVHTAIKHLK 130
            F RLSRLEGIIPALETSHALAYLEKLCP LP+GT+VVLNCSGRGDKDV TAIK+L+
Sbjct: 416  FKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 471


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags:
            Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase
            beta subunit [Camptotheca acuminata]
            gi|2801771|gb|AAB97526.1| tryptophan synthase beta
            [Camptotheca acuminata]
          Length = 466

 Score =  766 bits (1977), Expect = 0.0
 Identities = 391/475 (82%), Positives = 415/475 (87%), Gaps = 2/475 (0%)
 Frame = -2

Query: 1548 MAFSSSTTCRIQTPSSSLLVKPYRQSSSFPHLPFCTHKFTVLPS--KPSSISCVLTTKPQ 1375
            MA  ++  CR  T   S    PYR  S+     F   KF    S  K  SI C +  + +
Sbjct: 1    MAVYTNPACRTNT---SAFPGPYRPYSNPSRFSFNLDKFRPRTSAIKVPSICCTIAREME 57

Query: 1374 VMDEENNKNLNGSGLGVLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFKALADDQDFQ 1195
                E   +       VLQRPDSFGRFGKFGGKYVPETLM+ALTELE+AF++L+ DQ FQ
Sbjct: 58   KERSEREPD-------VLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQ 110

Query: 1194 KELDGILKDYVGRESPLYFAERLTEHYKRLNGEGPLIYLKREDLNHTGAHKINNAVAQAL 1015
            KELDGILKDYVGRESPLYFAERLT HYKR NGEGP IYLKREDLNHTGAHKINNAVAQAL
Sbjct: 111  KELDGILKDYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQAL 170

Query: 1014 LAKRLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQSLNVFRMRLLGAEV 835
            LAKRLGK+RIIAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQ+LNVFRMRLLGAEV
Sbjct: 171  LAKRLGKKRIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEV 230

Query: 834  RAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA 655
            RAVH+GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIGKETRKQA
Sbjct: 231  RAVHSGTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA 290

Query: 654  LEKWGGKPDVLVACVGGGSNAMGLFHEFVDDEDVRLIGVEAAGFGLDSGKHAATLTKGEV 475
            LEKWGGKPDVLVACVGGGSNAMGLFHEFVDD+DVR+IGVEAAGFGLDSGKHAATLTKGEV
Sbjct: 291  LEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEV 350

Query: 474  GVLHGAMSYLLQDDDGQITEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSITDEEALEAF 295
            GVLHGAMSYLLQDDDGQI EPHSISAGLDYPGVGPEHSFLKD+GRAEYY  TDEEALEAF
Sbjct: 351  GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAF 410

Query: 294  TRLSRLEGIIPALETSHALAYLEKLCPDLPNGTRVVLNCSGRGDKDVHTAIKHLK 130
             RLSRLEGIIPALETSHALA+LEKLCP LPNGT+VVLNCSGRGDKDVHTAIKHL+
Sbjct: 411  KRLSRLEGIIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQ 465


>ref|XP_004142558.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 472

 Score =  764 bits (1974), Expect = 0.0
 Identities = 385/476 (80%), Positives = 424/476 (89%), Gaps = 3/476 (0%)
 Frame = -2

Query: 1548 MAFSSSTTCRIQTPSSSLLVKPYRQSSSFPHLPFCTHKFTVLPS---KPSSISCVLTTKP 1378
            M  S++  C+I T S S      + SSS  H P    + +  PS   + +++SC LT +P
Sbjct: 1    MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60

Query: 1377 QVMDEENNKNLNGSGLGVLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFKALADDQDF 1198
             +  E+    ++ S L   QRPDSFGRFG+FGGKYVPETLMHALTELE AF +LA DQDF
Sbjct: 61   SLAMEDK---VHDSSLQ--QRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDF 115

Query: 1197 QKELDGILKDYVGRESPLYFAERLTEHYKRLNGEGPLIYLKREDLNHTGAHKINNAVAQA 1018
            QKELDGIL+DYVGRESPLYFAERLTEHY+R NGEGP I+LKREDLNHTGAHKINNAVAQA
Sbjct: 116  QKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQA 175

Query: 1017 LLAKRLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQSLNVFRMRLLGAE 838
            LLAKRLGK+RIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQ+LNVFRM+LLGAE
Sbjct: 176  LLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAE 235

Query: 837  VRAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQ 658
            VR VH+GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FHAVIGKETRKQ
Sbjct: 236  VRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQ 295

Query: 657  ALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDEDVRLIGVEAAGFGLDSGKHAATLTKGE 478
            ALEKWGGKPDVLVACVGGGSNAMGLFHEFV+D+DVRL+GVEAAGFGLDSGKHAATLTKGE
Sbjct: 296  ALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGE 355

Query: 477  VGVLHGAMSYLLQDDDGQITEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSITDEEALEA 298
            VGVLHGAMSYLLQDDDGQI EPHSISAGLDYPGVGPEHS+LKD+GRAEY+S+TD+EALEA
Sbjct: 356  VGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEA 415

Query: 297  FTRLSRLEGIIPALETSHALAYLEKLCPDLPNGTRVVLNCSGRGDKDVHTAIKHLK 130
            F RL+RLEGIIPALETSHALAYLEKLCP LP+GT+VVLNCSGRGDKDV TAIK+L+
Sbjct: 416  FKRLARLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 471