BLASTX nr result

ID: Cnidium21_contig00004905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004905
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   262   2e-68
ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
gb|ABK96073.1| unknown [Populus trichocarpa]                          242   3e-62
ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   238   4e-61
ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloropla...   238   4e-61

>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed
            protein product [Vitis vinifera]
          Length = 1071

 Score =  262 bits (670), Expect = 2e-68
 Identities = 131/166 (78%), Positives = 150/166 (90%)
 Frame = -3

Query: 511  IQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLAAKSVYKMDSLSRGELLPKVVEAY 332
            + QFVTRRLEQFLVD+ ISPEVVRSIL ERANWPCLA KS YKMD++SRGELLPKVVEAY
Sbjct: 907  VHQFVTRRLEQFLVDREISPEVVRSILTERANWPCLATKSAYKMDAMSRGELLPKVVEAY 966

Query: 331  SRPTRIVRGKEEILVDAQVDEAAFETNEERVLWTTFLLLRSKIHPGIEVDEFFENSSQLL 152
            SRPTRIVRGK+ +  D +VDEA+FETNEER LW  FL +R+KI+PGIEVD+FFE SSQLL
Sbjct: 967  SRPTRIVRGKD-VEADMEVDEASFETNEERALWRAFLSVRNKIYPGIEVDDFFEASSQLL 1025

Query: 151  QPLENFFDHVFVMVDDEILRKNRLALLQKIADLPKGIVDLSVLPGF 14
            QPLE+FF++VFVMV++E +RKNRLALL+KIADLPKGI DLSVLPGF
Sbjct: 1026 QPLEDFFNNVFVMVEEERIRKNRLALLKKIADLPKGIADLSVLPGF 1071


>ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  242 bits (617), Expect = 3e-62
 Identities = 122/166 (73%), Positives = 144/166 (86%)
 Frame = -3

Query: 511 IQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLAAKSVYKMDSLSRGELLPKVVEAY 332
           +  FVTRRLEQFLVDKGI PE+VRS+L ERA+ PCLAAK+ YKM++LSR  L PKVVEAY
Sbjct: 348 VHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFPKVVEAY 407

Query: 331 SRPTRIVRGKEEILVDAQVDEAAFETNEERVLWTTFLLLRSKIHPGIEVDEFFENSSQLL 152
           SRPTRIVRGK+ +  D +VDEAAFET+EER LW+TF   +SKI+PGIE+DEF E SS+LL
Sbjct: 408 SRPTRIVRGKD-VDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELL 466

Query: 151 QPLENFFDHVFVMVDDEILRKNRLALLQKIADLPKGIVDLSVLPGF 14
           QPLE+FF++VFVMV+DE +RKNRLALL KIADLP+GI DLSVLPGF
Sbjct: 467 QPLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512


>gb|ABK96073.1| unknown [Populus trichocarpa]
          Length = 512

 Score =  242 bits (617), Expect = 3e-62
 Identities = 122/166 (73%), Positives = 144/166 (86%)
 Frame = -3

Query: 511 IQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLAAKSVYKMDSLSRGELLPKVVEAY 332
           +  FVTRRLEQFLVDKGI PE+VRS+L ERA+ PCLAAK+ YKM++LSR  L PKVVEAY
Sbjct: 348 VHLFVTRRLEQFLVDKGIRPEIVRSVLAERASSPCLAAKTAYKMEALSRENLFPKVVEAY 407

Query: 331 SRPTRIVRGKEEILVDAQVDEAAFETNEERVLWTTFLLLRSKIHPGIEVDEFFENSSQLL 152
           SRPTRIVRGK+ +  D +VDEAAFET+EER LW+TF   +SKI+PGIE+DEF E SS+LL
Sbjct: 408 SRPTRIVRGKD-VDTDMKVDEAAFETDEERALWSTFTSTKSKIYPGIEIDEFVEISSELL 466

Query: 151 QPLENFFDHVFVMVDDEILRKNRLALLQKIADLPKGIVDLSVLPGF 14
           QPLE+FF++VFVMV+DE +RKNRLALL KIADLP+GI DLSVLPGF
Sbjct: 467 QPLEDFFNNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512


>ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2,
           chloroplastic/mitochondrial-like, partial [Cucumis
           sativus]
          Length = 534

 Score =  238 bits (607), Expect = 4e-61
 Identities = 114/168 (67%), Positives = 148/168 (88%), Gaps = 2/168 (1%)
 Frame = -3

Query: 511 IQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLAAKSVYKMDSLSRGELLPKVVEAY 332
           ++ FVTRRLEQFLVDKG+SPE+VRS+L ER+N+PCLAAK+ +KM+++S+G+L PK++EAY
Sbjct: 370 VKLFVTRRLEQFLVDKGLSPEIVRSVLAERSNFPCLAAKTAHKMNAMSKGDLFPKIIEAY 429

Query: 331 SRPTRIVRGKEEILVD--AQVDEAAFETNEERVLWTTFLLLRSKIHPGIEVDEFFENSSQ 158
           +RPTRI+ GK+   VD   +VDEA FE+NEER LW TFL +++K+HPGIEVDEFFE SS+
Sbjct: 430 ARPTRIISGKD---VDNAIEVDEANFESNEERALWNTFLSIKNKVHPGIEVDEFFEISSK 486

Query: 157 LLQPLENFFDHVFVMVDDEILRKNRLALLQKIADLPKGIVDLSVLPGF 14
           L+QPLE+FF+HVFVMV+DE +RKNRLALL++IADLP GI DLS+L GF
Sbjct: 487 LIQPLEDFFEHVFVMVEDEKIRKNRLALLKRIADLPSGIADLSLLSGF 534


>ref|XP_004140508.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 1068

 Score =  238 bits (607), Expect = 4e-61
 Identities = 114/168 (67%), Positives = 148/168 (88%), Gaps = 2/168 (1%)
 Frame = -3

Query: 511  IQQFVTRRLEQFLVDKGISPEVVRSILKERANWPCLAAKSVYKMDSLSRGELLPKVVEAY 332
            ++ FVTRRLEQFLVDKG+SPE+VRS+L ER+N+PCLAAK+ +KM+++S+G+L PK++EAY
Sbjct: 904  VKLFVTRRLEQFLVDKGLSPEIVRSVLAERSNFPCLAAKTAHKMNAMSKGDLFPKIIEAY 963

Query: 331  SRPTRIVRGKEEILVD--AQVDEAAFETNEERVLWTTFLLLRSKIHPGIEVDEFFENSSQ 158
            +RPTRI+ GK+   VD   +VDEA FE+NEER LW TFL +++K+HPGIEVDEFFE SS+
Sbjct: 964  ARPTRIISGKD---VDNAIEVDEANFESNEERALWNTFLSIKNKVHPGIEVDEFFEISSK 1020

Query: 157  LLQPLENFFDHVFVMVDDEILRKNRLALLQKIADLPKGIVDLSVLPGF 14
            L+QPLE+FF+HVFVMV+DE +RKNRLALL++IADLP GI DLS+L GF
Sbjct: 1021 LIQPLEDFFEHVFVMVEDEKIRKNRLALLKRIADLPSGIADLSLLSGF 1068


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