BLASTX nr result

ID: Cnidium21_contig00004830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004830
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284042.2| PREDICTED: isoamylase 3, chloroplastic-like ...    71   8e-11
emb|CBI19205.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002513977.1| isoamylase, putative [Ricinus communis] gi|2...    65   6e-09
ref|XP_004160286.1| PREDICTED: isoamylase 3, chloroplastic-like ...    64   1e-08
ref|XP_004136272.1| PREDICTED: isoamylase 3, chloroplastic-like ...    64   1e-08

>ref|XP_002284042.2| PREDICTED: isoamylase 3, chloroplastic-like [Vitis vinifera]
          Length = 784

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -1

Query: 169 KQRTTRVQARQAEERVLEGKALEMLEPSLQLKVSPGQAYPLGVSEIENGINFAIFS 2
           + RTT    R A++RVLE +A ++ E S  LKV PGQA+PLGVSE+ENGINFAIFS
Sbjct: 71  RPRTTNAYGRHAQDRVLEEEAPQIAETSPSLKVLPGQAFPLGVSEVENGINFAIFS 126


>emb|CBI19205.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -1

Query: 169 KQRTTRVQARQAEERVLEGKALEMLEPSLQLKVSPGQAYPLGVSEIENGINFAIFS 2
           + RTT    R A++RVLE +A ++ E S  LKV PGQA+PLGVSE+ENGINFAIFS
Sbjct: 62  RPRTTNAYGRHAQDRVLEEEAPQIAETSPSLKVLPGQAFPLGVSEVENGINFAIFS 117


>ref|XP_002513977.1| isoamylase, putative [Ricinus communis] gi|223547063|gb|EEF48560.1|
           isoamylase, putative [Ricinus communis]
          Length = 783

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -1

Query: 178 RQGKQRTTRVQARQAEERVL-EGKALEMLEPSLQLKVSPGQAYPLGVSEIENGINFAIFS 2
           R+ K RT  V AR A+ERVL E K  +M E +    + PGQA+PLGVSE++NGINFA+FS
Sbjct: 65  RRAKHRTPNVYARGAQERVLQEEKVSQMSEMTPSFNLYPGQAFPLGVSEVDNGINFALFS 124


>ref|XP_004160286.1| PREDICTED: isoamylase 3, chloroplastic-like [Cucumis sativus]
          Length = 780

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -1

Query: 199 QKIFIKVRQGKQRTTRVQARQA--EERVLEGKALEMLEPSLQLKVSPGQAYPLGVSEIEN 26
           ++IF + +QG  +   V A  +  ++RVLE +A E L+    LK+ PGQA+PLGVSE++N
Sbjct: 50  REIFSETKQGGVKLWTVSALSSRDQDRVLEQEAPENLDTGPMLKIFPGQAFPLGVSEVDN 109

Query: 25  GINFAIFS 2
           GINFAIFS
Sbjct: 110 GINFAIFS 117


>ref|XP_004136272.1| PREDICTED: isoamylase 3, chloroplastic-like [Cucumis sativus]
          Length = 776

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -1

Query: 199 QKIFIKVRQGKQRTTRVQARQA--EERVLEGKALEMLEPSLQLKVSPGQAYPLGVSEIEN 26
           ++IF + +QG  +   V A  +  ++RVLE +A E L+    LK+ PGQA+PLGVSE++N
Sbjct: 50  REIFSETKQGGVKLWTVSALSSRDQDRVLEQEAPENLDTGPMLKIFPGQAFPLGVSEVDN 109

Query: 25  GINFAIFS 2
           GINFAIFS
Sbjct: 110 GINFAIFS 117


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