BLASTX nr result

ID: Cnidium21_contig00004825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004825
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273061.1| PREDICTED: uncharacterized protein LOC100249...   245   2e-62
emb|CBI34677.3| unnamed protein product [Vitis vinifera]              228   3e-57
ref|XP_002304491.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-54
ref|XP_002509794.1| DNA binding protein, putative [Ricinus commu...   218   4e-54
ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265...   216   1e-53

>ref|XP_002273061.1| PREDICTED: uncharacterized protein LOC100249560 [Vitis vinifera]
          Length = 346

 Score =  245 bits (626), Expect = 2e-62
 Identities = 134/288 (46%), Positives = 170/288 (59%), Gaps = 5/288 (1%)
 Frame = +3

Query: 3   VSGSGSIYGSG-EQAQLSHPTAFKNLANPNLSVQTNVG----GSAYQAEDPSFNFSQGIN 167
           V GS S+ GSG     L  P  F+ L+NP + VQ+NV     G  +  +    NF  G N
Sbjct: 21  VVGSASLSGSGIHSGGLHAPPGFRPLSNPGIPVQSNVRNNSVGQTFSVDHSQTNFPHGFN 80

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXSNMSLALCPSSLNPSTGDVMQVEGEKKNRGRPR 347
                                       N+SL L P S  PS G       +K+ RGRP 
Sbjct: 81  MAVPSGVPPAEPVKRKRGRPRKYGPD-GNVSLGLSPMSARPSLGSGSVTPTQKRGRGRPP 139

Query: 348 GSGRKQRLSSLGEWMNSSAGMAFTPHVIHIAQGEDIASKLLAFAQQRPRALCVMSASGSV 527
           G+GRKQ+L++LGEWMNSSAG+AF PHVI +A GEDIA+++L+F+QQRPRALC++SASG+V
Sbjct: 140 GTGRKQQLATLGEWMNSSAGLAFAPHVISMAVGEDIATRILSFSQQRPRALCILSASGTV 199

Query: 528 SAVTLRQPMSSDSTLTYEGHFEILCLSGSYLVSDEGGPNNRAGGLSISVCTPDXXXXXXX 707
           SAVTLRQP SS  T+TYEG FEILCLSGSYL ++ GGP NR GG+S+S+C+PD       
Sbjct: 200 SAVTLRQPTSSSGTVTYEGRFEILCLSGSYLPAETGGPRNRIGGISVSLCSPDGHVIGGG 259

Query: 708 XXXXXXXXXXVQAIVCSFVYDGLKTKTKTEVDVKAQQTFEAHPNESSS 851
                     VQ + CSFVY G KTK K   + K  Q     P+ES++
Sbjct: 260 VGGMLIAASPVQVVACSFVYGGSKTKNKNGDEPKGDQNSGLQPSESAA 307


>emb|CBI34677.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  228 bits (581), Expect = 3e-57
 Identities = 112/200 (56%), Positives = 141/200 (70%)
 Frame = +3

Query: 252 NMSLALCPSSLNPSTGDVMQVEGEKKNRGRPRGSGRKQRLSSLGEWMNSSAGMAFTPHVI 431
           N+SL L P S  PS G       +K+ RGRP G+GRKQ+L++LGEWMNSSAG+AF PHVI
Sbjct: 71  NVSLGLSPMSARPSLGSGSVTPTQKRGRGRPPGTGRKQQLATLGEWMNSSAGLAFAPHVI 130

Query: 432 HIAQGEDIASKLLAFAQQRPRALCVMSASGSVSAVTLRQPMSSDSTLTYEGHFEILCLSG 611
            +A GEDIA+++L+F+QQRPRALC++SASG+VSAVTLRQP SS  T+TYEG FEILCLSG
Sbjct: 131 SMAVGEDIATRILSFSQQRPRALCILSASGTVSAVTLRQPTSSSGTVTYEGRFEILCLSG 190

Query: 612 SYLVSDEGGPNNRAGGLSISVCTPDXXXXXXXXXXXXXXXXXVQAIVCSFVYDGLKTKTK 791
           SYL ++ GGP NR GG+S+S+C+PD                 VQ + CSFVY G KTK K
Sbjct: 191 SYLPAETGGPRNRIGGISVSLCSPDGHVIGGGVGGMLIAASPVQVVACSFVYGGSKTKNK 250

Query: 792 TEVDVKAQQTFEAHPNESSS 851
              + K  Q     P+ES++
Sbjct: 251 NGDEPKGDQNSGLQPSESAA 270


>ref|XP_002304491.1| predicted protein [Populus trichocarpa] gi|222841923|gb|EEE79470.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  219 bits (558), Expect = 1e-54
 Identities = 130/296 (43%), Positives = 174/296 (58%), Gaps = 13/296 (4%)
 Frame = +3

Query: 9   GSGSIYGSGEQAQ---LSHPTAFKNLANPNLSVQTNV----GGSAYQAEDPSFNFSQGIN 167
           GSG I GSG  +Q   L  PT F++L++P+L+ Q+NV       A+  E P+ NF  GIN
Sbjct: 21  GSG-ILGSGSGSQHDPLHPPTGFRSLSSPHLASQSNVRPGSSAPAFSIEPPNANFGHGIN 79

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXS-NMSLALCPSSLNPSTGDVMQVEGEKKNRGRP 344
                                        ++ L+  P    PS+G+       K+NRGRP
Sbjct: 80  MAATSEVQVGEPVKKKRGRPRKYGLDGQVSLGLSSFPDKAKPSSGEDSSTS--KRNRGRP 137

Query: 345 RGSGRKQRLSSLGEWMNSSAGMAFTPHVIHIAQGEDIASKLLAFAQQRPRALCVMSASGS 524
            GSGRKQ+L++LGEWMNSSAG+AF+PHV+ I  GEDI SKLL+F+QQRPRA+C++S +G+
Sbjct: 138 PGSGRKQQLATLGEWMNSSAGLAFSPHVVSIGVGEDIVSKLLSFSQQRPRAVCILSGTGT 197

Query: 525 VSAVTLRQPMSSDSTLTYEGHFEILCLSGSYLVSDEGGPNNRAGGLSISVCTPDXXXXXX 704
           VS+VTLRQP SS   +TYEG FEILCLSGSYL++++GGP NR GG+S S  +PD      
Sbjct: 198 VSSVTLRQPASSGPPITYEGRFEILCLSGSYLIAEDGGPRNRTGGISASFSSPD-GHVIG 256

Query: 705 XXXXXXXXXXXVQAIVCSFVYDGLKT-----KTKTEVDVKAQQTFEAHPNESSSTP 857
                      VQ +VC+F+Y G K      + K + D  A Q  +   N  S+TP
Sbjct: 257 GAIAMLIAASPVQVVVCTFLYGGSKKDKQVGRPKNKKD-SASQLDDNSANLKSATP 311


>ref|XP_002509794.1| DNA binding protein, putative [Ricinus communis]
           gi|223549693|gb|EEF51181.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 347

 Score =  218 bits (554), Expect = 4e-54
 Identities = 125/282 (44%), Positives = 159/282 (56%), Gaps = 5/282 (1%)
 Frame = +3

Query: 27  GSGEQAQLSH-PTAFKNLANPNLSVQTNV----GGSAYQAEDPSFNFSQGINXXXXXXXX 191
           GSG QA   H P  F+ LANPNL   +N      GS++  E  + NF  G+N        
Sbjct: 28  GSGSQAGGFHSPPGFRPLANPNLLAHSNTRPGSSGSSFSIEPSNINFVHGMNVAVPSGLP 87

Query: 192 XXXXXXXXXXXXXXXXXXXSNMSLALCPSSLNPSTGDVMQVEGEKKNRGRPRGSGRKQRL 371
                                +SL L P  + P           K+ RGRP G+GRKQ+L
Sbjct: 88  VGEPVKKKRGRPRKYAPD-GQVSLGLSPLPVKPKPSSGQDPLSPKRARGRPPGTGRKQQL 146

Query: 372 SSLGEWMNSSAGMAFTPHVIHIAQGEDIASKLLAFAQQRPRALCVMSASGSVSAVTLRQP 551
           + LGEWMNSSAG+AF+PHVI I  GEDI +K+L+FAQQRPRALC++S +G+VS+VTLRQP
Sbjct: 147 ALLGEWMNSSAGIAFSPHVIRIGVGEDIVAKVLSFAQQRPRALCILSGTGTVSSVTLRQP 206

Query: 552 MSSDSTLTYEGHFEILCLSGSYLVSDEGGPNNRAGGLSISVCTPDXXXXXXXXXXXXXXX 731
            SS  TLT+EG FEILCLSGSYLV+++GGP NR GG+S S+ +PD               
Sbjct: 207 ASSGPTLTFEGRFEILCLSGSYLVAEDGGPRNRTGGISASLSSPD-GHVIGGAIGMLIAA 265

Query: 732 XXVQAIVCSFVYDGLKTKTKTEVDVKAQQTFEAHPNESSSTP 857
             VQ + CSFV+   K K K     K  +   +H  + S TP
Sbjct: 266 GPVQVVACSFVHGASKVKDKPVGRPKINKESASHSGDKSVTP 307


>ref|XP_002272142.1| PREDICTED: uncharacterized protein LOC100265498 [Vitis vinifera]
           gi|297745264|emb|CBI40344.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  216 bits (549), Expect = 1e-53
 Identities = 126/297 (42%), Positives = 172/297 (57%), Gaps = 11/297 (3%)
 Frame = +3

Query: 3   VSGSGSIYGSGEQAQLSHPTAFKNLANPNLSVQTNVGG-----SAYQAEDPSFNFSQGIN 167
           ++GSGS  GSG Q  L      ++L+NP++  Q N+GG     S    E  S   + G+N
Sbjct: 21  MAGSGS--GSGPQPGLHGSPGIRSLSNPSMPFQPNIGGGGSMGSTLPVEPSSVISTHGVN 78

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXSNMSLALCPSSL-NPSTGDVMQVEGEKKNRGRP 344
                                        +SLAL PSS  +P T   +    +K+ RGRP
Sbjct: 79  VGAPSTLLPPSEPVKRKRGRPRKYGPDGTVSLALSPSSATSPGT---LTASTQKRGRGRP 135

Query: 345 RGSGRKQRLSSLGEWMNSSAGMAFTPHVIHIAQGEDIASKLLAFAQQRPRALCVMSASGS 524
            G+GRKQ+L+SLGEW++ SAGM FTPHVI +A GED+A+K+++F+QQ PRA+C++SA+G+
Sbjct: 136 PGTGRKQQLASLGEWLSGSAGMGFTPHVITVAVGEDVATKIMSFSQQGPRAICILSANGA 195

Query: 525 VSAVTLRQPMSSDSTLTYEGHFEILCLSGSYLVSDEGGPNNRAGGLSISVCTPDXXXXXX 704
           VS VTLRQP +S  T+TYEG FEILCLSGSYL++D GG  NR GGLS+S+ +PD      
Sbjct: 196 VSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTDNGGSRNRTGGLSVSLASPDGRVIGG 255

Query: 705 XXXXXXXXXXXVQAIVCSFVYDGLKTKTKTEVDVKA-----QQTFEAHPNESSSTPP 860
                      VQ IV SF++   KTK K    V+      +QT + HP  + +T P
Sbjct: 256 GVGGMLTAASPVQVIVGSFIWGNSKTKNKMGESVEGAGDSERQTVD-HPITTPTTVP 311


Top