BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004808
         (1928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   219   2e-54
gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subc...   219   2e-54
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        219   2e-54
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         219   2e-54
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   219   2e-54

>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  219 bits (559), Expect = 2e-54
 Identities = 105/197 (53%), Positives = 142/197 (72%)
 Frame = +2

Query: 2    VSKLARYTSCPNRTHWDALDRVLRYLKGTMYLSLHYRRFPGVLEGYSDASWIAKKSGSNG 181
            VSKL+R+TS P   HW AL+RV+RYLKGT+ L LHY  +P VLEGYSD++WI+       
Sbjct: 896  VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKA 955

Query: 182  VTGYVFTLAGGAISWKSTKQTIITRSTFEAELCALDATGTEAEWLHGLMSAIPVVSRPLP 361
             +GYVFTL GGA+SW+S KQTI+TRST EAEL ALD    EAEWL  L+  +PVV +P+P
Sbjct: 956  TSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVP 1015

Query: 362  AIAIHCDSRTTIDKISSKRYNVKTKRHIQVRLKSIRGLVSDRIIAIEFIGTQNNIADPLT 541
            AI ++CD++T I K++S + N+K+ RH++ RLKS+R L +  +I +++I T  N+ADP T
Sbjct: 1016 AILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFT 1075

Query: 542  KGLEPAVVLKSRLGMGL 592
            KGL   V+  +   MGL
Sbjct: 1076 KGLSRNVINNASKEMGL 1092


>gb|ABF94929.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1284

 Score =  219 bits (559), Expect = 2e-54
 Identities = 104/197 (52%), Positives = 142/197 (72%)
 Frame = +2

Query: 2    VSKLARYTSCPNRTHWDALDRVLRYLKGTMYLSLHYRRFPGVLEGYSDASWIAKKSGSNG 181
            VSKL+R+TS P   HW AL+RV+RYLKGT+ L LHY  +P VLEGYSD++WI+       
Sbjct: 998  VSKLSRFTSNPGDNHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKA 1057

Query: 182  VTGYVFTLAGGAISWKSTKQTIITRSTFEAELCALDATGTEAEWLHGLMSAIPVVSRPLP 361
             +GYVFTL GGA+SW+S KQTI+TRST EAEL ALD    EAEWL  L+  +P+V +P+P
Sbjct: 1058 TSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPIVEKPVP 1117

Query: 362  AIAIHCDSRTTIDKISSKRYNVKTKRHIQVRLKSIRGLVSDRIIAIEFIGTQNNIADPLT 541
            AI ++CD++T I K++S + N+K+ RH++ RLKS+R L +  +I +++I T  N+ADP T
Sbjct: 1118 AIVMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFT 1177

Query: 542  KGLEPAVVLKSRLGMGL 592
            KGL   V+  +   MGL
Sbjct: 1178 KGLSRNVIDNASKEMGL 1194


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  219 bits (558), Expect = 2e-54
 Identities = 105/197 (53%), Positives = 142/197 (72%)
 Frame = +2

Query: 2    VSKLARYTSCPNRTHWDALDRVLRYLKGTMYLSLHYRRFPGVLEGYSDASWIAKKSGSNG 181
            VSKL+R+TS P   HW AL+RV+RYLKGT+ L LHY  +P VLEGYSD++WI+       
Sbjct: 1075 VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKA 1134

Query: 182  VTGYVFTLAGGAISWKSTKQTIITRSTFEAELCALDATGTEAEWLHGLMSAIPVVSRPLP 361
             +GYVFTL GGA+SW+S KQTI+TRST EAEL ALD    EAEWL  L+  +PVV +P+P
Sbjct: 1135 TSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVP 1194

Query: 362  AIAIHCDSRTTIDKISSKRYNVKTKRHIQVRLKSIRGLVSDRIIAIEFIGTQNNIADPLT 541
            AI ++CD++T I K++S + N+K+ RH++ RLKS+R L +  +I +++I T  N+ADP T
Sbjct: 1195 AILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFT 1254

Query: 542  KGLEPAVVLKSRLGMGL 592
            KGL   V+  +   MGL
Sbjct: 1255 KGLSRNVIDNASKEMGL 1271


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  219 bits (558), Expect = 2e-54
 Identities = 105/197 (53%), Positives = 142/197 (72%)
 Frame = +2

Query: 2    VSKLARYTSCPNRTHWDALDRVLRYLKGTMYLSLHYRRFPGVLEGYSDASWIAKKSGSNG 181
            VSKL+R+TS P   HW AL+RV+RYLKGT+ L LHY  +P VLEGYSD++WI+       
Sbjct: 1103 VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKA 1162

Query: 182  VTGYVFTLAGGAISWKSTKQTIITRSTFEAELCALDATGTEAEWLHGLMSAIPVVSRPLP 361
             +GYVFTL GGA+SW+S KQTI+TRST EAEL ALD    EAEWL  L+  +PVV +P+P
Sbjct: 1163 TSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVP 1222

Query: 362  AIAIHCDSRTTIDKISSKRYNVKTKRHIQVRLKSIRGLVSDRIIAIEFIGTQNNIADPLT 541
            AI ++CD++T I K++S + N+K+ RH++ RLKS+R L +  +I +++I T  N+ADP T
Sbjct: 1223 AILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFT 1282

Query: 542  KGLEPAVVLKSRLGMGL 592
            KGL   V+  +   MGL
Sbjct: 1283 KGLSRNVIDNASKEMGL 1299


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  219 bits (558), Expect = 2e-54
 Identities = 105/197 (53%), Positives = 142/197 (72%)
 Frame = +2

Query: 2    VSKLARYTSCPNRTHWDALDRVLRYLKGTMYLSLHYRRFPGVLEGYSDASWIAKKSGSNG 181
            VSKL+R+TS P   HW AL+RV+RYLKGT+ L LHY  +P VLEGYSD++WI+       
Sbjct: 1319 VSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKA 1378

Query: 182  VTGYVFTLAGGAISWKSTKQTIITRSTFEAELCALDATGTEAEWLHGLMSAIPVVSRPLP 361
             +GYVFTL GGA+SW+S KQTI+TRST EAEL ALD    EAEWL  L+  +PVV +P+P
Sbjct: 1379 TSGYVFTLGGGAVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVP 1438

Query: 362  AIAIHCDSRTTIDKISSKRYNVKTKRHIQVRLKSIRGLVSDRIIAIEFIGTQNNIADPLT 541
            AI ++CD++T I K++S + N+K+ RH++ RLKS+R L +  +I +++I T  N+ADP T
Sbjct: 1439 AILMNCDNQTVIVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFT 1498

Query: 542  KGLEPAVVLKSRLGMGL 592
            KGL   V+  +   MGL
Sbjct: 1499 KGLSRNVIDNASKEMGL 1515