BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004795
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26363.3| unnamed protein product [Vitis vinifera]              263   3e-68
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su...   263   4e-68
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su...   261   9e-68
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai...   258   1e-66
ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|2...   257   2e-66

>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  263 bits (672), Expect = 3e-68
 Identities = 125/176 (71%), Positives = 151/176 (85%)
 Frame = +3

Query: 114 KMFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFSAKKATSTLGYFLAVTTLDKVG 293
           +MFLK QL WNVIIPAE LDAKGL LQ++II+RLLD FS KKAT  LGYFLAVTTL+ +G
Sbjct: 65  EMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIG 124

Query: 294 EGKVRQHSGDVLFPVTFSCITYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQ 473
           EGKVRQHSGDVLFPV FSC+T+K F GEIL+G VHK+LKHGV LRCGPVE+IYLS  KM 
Sbjct: 125 EGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMP 184

Query: 474 GYSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEREFQAVANLDGDYLGPI 641
            Y +VPGENP+F++EK +KIEK V +R +V+G +++EAEREFQA+ +L+GDYLGP+
Sbjct: 185 DYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPL 240


>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147822056|emb|CAN61549.1| hypothetical
           protein VITISV_043525 [Vitis vinifera]
          Length = 177

 Score =  263 bits (671), Expect = 4e-68
 Identities = 125/175 (71%), Positives = 150/175 (85%)
 Frame = +3

Query: 117 MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFSAKKATSTLGYFLAVTTLDKVGE 296
           MFLK QL WNVIIPAE LDAKGL LQ++II+RLLD FS KKAT  LGYFLAVTTL+ +GE
Sbjct: 1   MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60

Query: 297 GKVRQHSGDVLFPVTFSCITYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQG 476
           GKVRQHSGDVLFPV FSC+T+K F GEIL+G VHK+LKHGV LRCGPVE+IYLS  KM  
Sbjct: 61  GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120

Query: 477 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEREFQAVANLDGDYLGPI 641
           Y +VPGENP+F++EK +KIEK V +R +V+G +++EAEREFQA+ +L+GDYLGP+
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPL 175


>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449522228|ref|XP_004168129.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 175

 Score =  261 bits (668), Expect = 9e-68
 Identities = 126/175 (72%), Positives = 153/175 (87%)
 Frame = +3

Query: 117 MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFSAKKATSTLGYFLAVTTLDKVGE 296
           MFLK QL WNVIIPAENLDAKGL LQ++II+RLLDEF+ KKAT  LGYFLAVTTL+ +GE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60

Query: 297 GKVRQHSGDVLFPVTFSCITYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQG 476
           GKVRQ +GDVLFPV FS IT+K + GEILEG VHK+LKHGVFLRCGPVE+IYLS+LKM  
Sbjct: 61  GKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119

Query: 477 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEREFQAVANLDGDYLGPI 641
           Y +VPGENP+F+++K +KIEK V +R +VIG +++EAEREFQA+ +L+GDYLGP+
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPV 174


>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
           N-terminal domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 178

 Score =  258 bits (658), Expect = 1e-66
 Identities = 116/175 (66%), Positives = 154/175 (88%)
 Frame = +3

Query: 117 MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFSAKKATSTLGYFLAVTTLDKVGE 296
           MFLK QL WNV+IPAEN+DAKGL L++AI+V LLD F++KKAT  LGY++AVTTLDK+GE
Sbjct: 1   MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYVAVTTLDKIGE 60

Query: 297 GKVRQHSGDVLFPVTFSCITYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQG 476
           GK+R+H+G+VLFPV FS +T+K F GEI+ G VHK+LKHGVF+RCGP+E++YLS+ KM  
Sbjct: 61  GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120

Query: 477 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEREFQAVANLDGDYLGPI 641
           Y +VPGENPIFM+EK+++I+    +RV+VIG+++MEAEREFQA+A+L+GDYLGP+
Sbjct: 121 YKYVPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEAEREFQALASLEGDYLGPL 175


>ref|XP_002312568.1| predicted protein [Populus trichocarpa] gi|222852388|gb|EEE89935.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  257 bits (657), Expect = 2e-66
 Identities = 119/175 (68%), Positives = 152/175 (86%)
 Frame = +3

Query: 117 MFLKAQLQWNVIIPAENLDAKGLALQKAIIVRLLDEFSAKKATSTLGYFLAVTTLDKVGE 296
           MFLK QL WNVIIPAENLDAKGL LQ++I+VRLLD+F+ K AT  LGY+LAV+TL+ +GE
Sbjct: 1   MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60

Query: 297 GKVRQHSGDVLFPVTFSCITYKAFAGEILEGEVHKILKHGVFLRCGPVEHIYLSHLKMQG 476
           GKVRQH+GDVLFPV FS IT+K F GEIL+G VHK+LKHGV LRCGP+E+IYLS +KM  
Sbjct: 61  GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120

Query: 477 YSFVPGENPIFMSEKSAKIEKGVKLRVMVIGVRYMEAEREFQAVANLDGDYLGPI 641
           Y +VPGENP+F+++K++KIEK V +R +V+G +++EAEREFQA+ +L+GDYLGP+
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPV 175