BLASTX nr result

ID: Cnidium21_contig00004785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004785
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB40638.1| expansin, partial [Pinus taeda]                         62   5e-08
gb|EAZ11407.1| hypothetical protein OsJ_01268 [Oryza sativa Japo...    60   1e-07
ref|XP_002446193.1| hypothetical protein SORBIDRAFT_06g003250 [S...    59   5e-07
gb|AAD49953.1|AF167357_1 expansin [Rumex acetosa]                      57   1e-06
gb|AAM12783.1| putative expansin [Capsicum annuum]                     57   1e-06

>gb|AAB40638.1| expansin, partial [Pinus taeda]
          Length = 102

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = +2

Query: 2   YGNLYSAGYVTNTAALSTALFSDGVSCGQYYPCVKSGRVRFKVNG 136
           YGNLYS GY TNTAALSTALF++G+SCG  Y   K G +RF VNG
Sbjct: 57  YGNLYSQGYGTNTAALSTALFNNGLSCGACYEIGKGG-IRFTVNG 100


>gb|EAZ11407.1| hypothetical protein OsJ_01268 [Oryza sativa Japonica Group]
          Length = 184

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
 Frame = +2

Query: 2   YGNLYSAGYVTNTAALSTALFSDGVSCG-----------------QY--YPCVKSGRVRF 124
           YGNLYSAGY T+TAALSTALF++G SCG                 QY    C K G +RF
Sbjct: 36  YGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRIAQARAGVVPVQYRRVACAKQGGIRF 95

Query: 125 KVNGRK*FELVLI 163
            + G   F LVL+
Sbjct: 96  TITGHSYFNLVLV 108


>ref|XP_002446193.1| hypothetical protein SORBIDRAFT_06g003250 [Sorghum bicolor]
           gi|241937376|gb|EES10521.1| hypothetical protein
           SORBIDRAFT_06g003250 [Sorghum bicolor]
          Length = 263

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/47 (63%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +2

Query: 2   YGNLYSAGYVTNTAALSTALFSDGVSCGQYY--PCVKSGRVRFKVNG 136
           YGNLYS GY TNTAALSTALF+DG SCGQ Y   C      RF + G
Sbjct: 59  YGNLYSTGYGTNTAALSTALFNDGASCGQCYRISCDYQADPRFCIRG 105


>gb|AAD49953.1|AF167357_1 expansin [Rumex acetosa]
          Length = 156

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +2

Query: 2   YGNLYSAGYVTNTAALSTALFSDGVSCGQYYPCVKSGRVRFKVNG 136
           YGNLYS GY TNTAALSTALF+DG+SCG  +    SG  R+ + G
Sbjct: 6   YGNLYSQGYGTNTAALSTALFNDGLSCGACFEMRCSGDPRWCIGG 50


>gb|AAM12783.1| putative expansin [Capsicum annuum]
          Length = 256

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   YGNLYSAGYVTNTAALSTALFSDGVSCGQYY 94
           YGNLYS GY TNTAALSTALF+DG SCGQ Y
Sbjct: 53  YGNLYSTGYGTNTAALSTALFNDGASCGQCY 83


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