BLASTX nr result

ID: Cnidium21_contig00004769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004769
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329216.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
ref|NP_565155.1| uncharacterized protein [Arabidopsis thaliana] ...   135   1e-29
ref|XP_002887678.1| hypothetical protein ARALYDRAFT_316646 [Arab...   133   5e-29
ref|XP_002264665.1| PREDICTED: protein KRTCAP2 homolog [Vitis vi...   130   3e-28
ref|XP_003568227.1| PREDICTED: protein KRTCAP2 homolog [Brachypo...   128   2e-27

>ref|XP_002329216.1| predicted protein [Populus trichocarpa] gi|222870997|gb|EEF08128.1|
           predicted protein [Populus trichocarpa]
          Length = 122

 Score =  136 bits (343), Expect = 4e-30
 Identities = 68/99 (68%), Positives = 79/99 (79%)
 Frame = +3

Query: 204 QQMYRAKLASTELFTIXXXXXXXXXXXXXXXXIGNYQESSGVKTGWGAVILSELVALIAA 383
           Q+MYR+KLASTELFTI                IGN+QE+ G+KTGWGAVIL+E VALIAA
Sbjct: 23  QEMYRSKLASTELFTILGGFISSLLFLVLLTLIGNFQETCGMKTGWGAVILAEAVALIAA 82

Query: 384 GTVHRVCITTCFLFSAGLLYEVNKLSGMSVGKTESKARR 500
           GTVHRVCITTCFLFSAGLLYEVNKLSG+++ K++SK RR
Sbjct: 83  GTVHRVCITTCFLFSAGLLYEVNKLSGLTLSKSDSKTRR 121


>ref|NP_565155.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79321402|ref|NP_001031293.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|11079487|gb|AAG29199.1|AC078898_9 unknown protein
           [Arabidopsis thaliana] gi|16648791|gb|AAL25586.1|
           At1g77350/F2P24_6 [Arabidopsis thaliana]
           gi|20466127|gb|AAM19985.1| At1g77350/F2P24_6
           [Arabidopsis thaliana] gi|332197846|gb|AEE35967.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332197847|gb|AEE35968.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 122

 Score =  135 bits (340), Expect = 1e-29
 Identities = 66/99 (66%), Positives = 79/99 (79%)
 Frame = +3

Query: 204 QQMYRAKLASTELFTIXXXXXXXXXXXXXXXXIGNYQESSGVKTGWGAVILSELVALIAA 383
           Q++YR KLAS+ELFTI                IGN+QESSG+K+GWGAVIL+E++ALIAA
Sbjct: 23  QEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFQESSGIKSGWGAVILAEIIALIAA 82

Query: 384 GTVHRVCITTCFLFSAGLLYEVNKLSGMSVGKTESKARR 500
           GTVHRVCITTCFLFSAGLLYEVNK+SG  + KTESK++R
Sbjct: 83  GTVHRVCITTCFLFSAGLLYEVNKISGYMLSKTESKSKR 121


>ref|XP_002887678.1| hypothetical protein ARALYDRAFT_316646 [Arabidopsis lyrata subsp.
           lyrata] gi|297333519|gb|EFH63937.1| hypothetical protein
           ARALYDRAFT_316646 [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  133 bits (334), Expect = 5e-29
 Identities = 65/99 (65%), Positives = 78/99 (78%)
 Frame = +3

Query: 204 QQMYRAKLASTELFTIXXXXXXXXXXXXXXXXIGNYQESSGVKTGWGAVILSELVALIAA 383
           Q++YR KLAS+ELFTI                IGN+QESSG+K+GWGAVIL+E++ALIAA
Sbjct: 23  QEIYRGKLASSELFTILGGFTSSLLFLFSLTFIGNFQESSGIKSGWGAVILAEIIALIAA 82

Query: 384 GTVHRVCITTCFLFSAGLLYEVNKLSGMSVGKTESKARR 500
            TVHRVCITTCFLFSAGLLYEVNK+SG  + KTESK++R
Sbjct: 83  STVHRVCITTCFLFSAGLLYEVNKISGYMLSKTESKSKR 121


>ref|XP_002264665.1| PREDICTED: protein KRTCAP2 homolog [Vitis vinifera]
           gi|297736152|emb|CBI24190.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  130 bits (327), Expect = 3e-28
 Identities = 66/99 (66%), Positives = 76/99 (76%)
 Frame = +3

Query: 204 QQMYRAKLASTELFTIXXXXXXXXXXXXXXXXIGNYQESSGVKTGWGAVILSELVALIAA 383
           Q+MYR KLAS+ELFTI                IGN QE+ G++TGWGAVIL+E VALIAA
Sbjct: 22  QEMYRGKLASSELFTILGGFISSLIFLVLLTFIGNIQETCGMRTGWGAVILAEAVALIAA 81

Query: 384 GTVHRVCITTCFLFSAGLLYEVNKLSGMSVGKTESKARR 500
            TVHRVCITTCFLFSAGLLYE+NKLSGM + K+ESK+RR
Sbjct: 82  STVHRVCITTCFLFSAGLLYELNKLSGMMLSKSESKSRR 120


>ref|XP_003568227.1| PREDICTED: protein KRTCAP2 homolog [Brachypodium distachyon]
          Length = 121

 Score =  128 bits (321), Expect = 2e-27
 Identities = 63/98 (64%), Positives = 74/98 (75%)
 Frame = +3

Query: 207 QMYRAKLASTELFTIXXXXXXXXXXXXXXXXIGNYQESSGVKTGWGAVILSELVALIAAG 386
           +MYR   AS+EL TI                IGNYQE+SG+KTGWGAV+++ELVALI AG
Sbjct: 23  EMYRGSFASSELMTIAGGFISSLLFLLLLTFIGNYQEASGIKTGWGAVVVAELVALIVAG 82

Query: 387 TVHRVCITTCFLFSAGLLYEVNKLSGMSVGKTESKARR 500
           TVHRVCITTCFLFS GLLYEV+KLSGM + ++ESKARR
Sbjct: 83  TVHRVCITTCFLFSVGLLYEVDKLSGMILARSESKARR 120


Top