BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004750
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   369   e-155
ref|XP_002304476.1| predicted protein [Populus trichocarpa] gi|2...   367   e-153
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   364   e-153
gb|AFK40126.1| unknown [Medicago truncatula]                          366   e-153
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li...   366   e-152

>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223549638|gb|EEF51126.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 333

 Score =  369 bits (946), Expect(2) = e-155
 Identities = 180/194 (92%), Positives = 190/194 (97%)
 Frame = +1

Query: 583  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEA 762
            YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL++VV AEKVPYVPEGLEA
Sbjct: 140  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPYVPEGLEA 199

Query: 763  IIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPHPLHVKNMIRNILEGKFDDACS 942
            IIFTADGDMRQALNNLQAT SGF+FVNQENVFKVCDQPHPLHVKNM+R+++EGK+DDACS
Sbjct: 200  IIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEGKYDDACS 259

Query: 943  GLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 1122
            GLK LYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL
Sbjct: 260  GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 319

Query: 1123 LAKFALVRETAKAA 1164
            LAK ALVR+TA+AA
Sbjct: 320  LAKLALVRDTARAA 333



 Score =  209 bits (531), Expect(2) = e-155
 Identities = 99/110 (90%), Positives = 107/110 (97%)
 Frame = +2

Query: 155 QGYEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAH 334
           Q Y++PWVEK+RP+K+CDIVGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAH
Sbjct: 11  QNYDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 70

Query: 335 ELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILD 484
           ELLGPN KE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILD
Sbjct: 71  ELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120


>ref|XP_002304476.1| predicted protein [Populus trichocarpa] gi|222841908|gb|EEE79455.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  367 bits (943), Expect(2) = e-153
 Identities = 180/194 (92%), Positives = 188/194 (96%)
 Frame = +1

Query: 583  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEA 762
            YSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLMVVV AE+VPYVPEGLEA
Sbjct: 137  YSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQVPYVPEGLEA 196

Query: 763  IIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPHPLHVKNMIRNILEGKFDDACS 942
            IIFTADGDMRQALNNLQAT SGF FVNQENVFKVCDQPHPLHVKNM+R +LEGKFDDACS
Sbjct: 197  IIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEGKFDDACS 256

Query: 943  GLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 1122
            GLK LYD+GYSPTDIITTLFRIIKNYDMAEY+KLEFMKETGFAHMRICDGVGSYLQLCGL
Sbjct: 257  GLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVGSYLQLCGL 316

Query: 1123 LAKFALVRETAKAA 1164
            LAK ALVR+TA+AA
Sbjct: 317  LAKLALVRDTARAA 330



 Score =  202 bits (515), Expect(2) = e-153
 Identities = 98/108 (90%), Positives = 104/108 (96%)
 Frame = +2

Query: 161 YEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 340
           Y++PWVEK+RP KV DIVGN+DAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL
Sbjct: 10  YDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 69

Query: 341 LGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILD 484
           LGPN KE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILD
Sbjct: 70  LGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILD 117


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
            gi|449494241|ref|XP_004159490.1| PREDICTED: replication
            factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  364 bits (935), Expect(2) = e-153
 Identities = 176/193 (91%), Positives = 189/193 (97%)
 Frame = +1

Query: 583  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEA 762
            YSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLMVV+ AEKVPYVPEGLEA
Sbjct: 138  YSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPYVPEGLEA 197

Query: 763  IIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPHPLHVKNMIRNILEGKFDDACS 942
            IIFTADGDMRQALNNLQAT SGF+FVNQ+NVFKVCDQPHPLHVKN++RN+LEGKFDDAC+
Sbjct: 198  IIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEGKFDDACT 257

Query: 943  GLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 1122
            GL+ LYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL
Sbjct: 258  GLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 317

Query: 1123 LAKFALVRETAKA 1161
            LAK ++VRETAKA
Sbjct: 318  LAKLSMVRETAKA 330



 Score =  205 bits (522), Expect(2) = e-153
 Identities = 99/108 (91%), Positives = 105/108 (97%)
 Frame = +2

Query: 161 YEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 340
           Y++PWVEK+RP KV DIVGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11  YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 341 LGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILD 484
           LGPN KEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILD
Sbjct: 71  LGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 118


>gb|AFK40126.1| unknown [Medicago truncatula]
          Length = 333

 Score =  366 bits (939), Expect(2) = e-153
 Identities = 179/194 (92%), Positives = 187/194 (96%)
 Frame = +1

Query: 583  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEA 762
            YSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLMVVV AEKVPYVPEGLEA
Sbjct: 140  YSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYVPEGLEA 199

Query: 763  IIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPHPLHVKNMIRNILEGKFDDACS 942
            IIFTADGDMRQ LNNLQAT SGFQFVNQ NVFKVCDQPHPLHVKNM+RN++EG FD+ACS
Sbjct: 200  IIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGNFDEACS 259

Query: 943  GLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 1122
            GLK LYDLGYSPTDIITTLFRIIK+YDMAEYLKLEFMKETGFAHMRICDGVGSYLQ+CGL
Sbjct: 260  GLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRICDGVGSYLQMCGL 319

Query: 1123 LAKFALVRETAKAA 1164
            LAKFALVR+TA AA
Sbjct: 320  LAKFALVRDTANAA 333



 Score =  202 bits (514), Expect(2) = e-153
 Identities = 97/108 (89%), Positives = 105/108 (97%)
 Frame = +2

Query: 161 YEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 340
           Y++PWVEK+RP+KV DIVGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 13  YDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72

Query: 341 LGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILD 484
           LGPN +E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILD
Sbjct: 73  LGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD 120


>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 331

 Score =  366 bits (939), Expect(2) = e-152
 Identities = 179/193 (92%), Positives = 187/193 (96%)
 Frame = +1

Query: 583  YSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVAAEKVPYVPEGLEA 762
            YSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLMVVV AEKVPYVPEGLEA
Sbjct: 138  YSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPYVPEGLEA 197

Query: 763  IIFTADGDMRQALNNLQATCSGFQFVNQENVFKVCDQPHPLHVKNMIRNILEGKFDDACS 942
            IIFTADGDMRQALNNLQAT SGFQFVNQ NVFKVCDQPHPLHVKNM+RN++EG FD+ACS
Sbjct: 198  IIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEGNFDEACS 257

Query: 943  GLKSLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 1122
            GLK LYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL
Sbjct: 258  GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGSYLQLCGL 317

Query: 1123 LAKFALVRETAKA 1161
            LAK +LVRETAKA
Sbjct: 318  LAKLSLVRETAKA 330



 Score =  201 bits (510), Expect(2) = e-152
 Identities = 99/109 (90%), Positives = 105/109 (96%), Gaps = 1/109 (0%)
 Frame = +2

Query: 161 YEMPWVEKFRPTKVCDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 340
           Y++PWVEK+RP+KV DIVGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 10  YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 69

Query: 341 L-GPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILD 484
           L GPNCKE VLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKI+ILD
Sbjct: 70  LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILD 118