BLASTX nr result

ID: Cnidium21_contig00004730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004730
         (1461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camel...   565   0.0  
gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Campt...   562   0.0  
gb|ABM89226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductas...   547   0.0  
ref|NP_001234728.1| ISPH protein [Solanum lycopersicum] gi|26217...   543   0.0  
ref|XP_002284659.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diph...   542   0.0  

>gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camellia sinensis]
          Length = 459

 Score =  565 bits (1457), Expect(2) = 0.0
 Identities = 280/359 (77%), Positives = 316/359 (88%), Gaps = 5/359 (1%)
 Frame = -1

Query: 1350 MSISLQFSRFSPAADVFSPEFNRFPCRKLVRSVRCAA-----PTVTNGDSQFDTKEFRKN 1186
            M+ISLQ  RF+   D+  P    FPCRK + SVRC+A     P+V   D  FD K FRKN
Sbjct: 1    MAISLQLCRFTTRTDISLPGLRVFPCRKPL-SVRCSAGESPSPSVAV-DEDFDAKVFRKN 58

Query: 1185 LTRKANYNRKGFGRKDETLQDMKKEYYSDIIQTLKANGYEYTWGNVTVKLAESYGFCWGV 1006
            LTR  NYNR+GFG K+ETL+ M +EY SDII+TLK NG EYTWGN+TVKLAESYGFCWGV
Sbjct: 59   LTRSKNYNRRGFGHKEETLELMNREYTSDIIKTLKDNGNEYTWGNITVKLAESYGFCWGV 118

Query: 1005 ERAIQITYEAKKQFPEEKIWITNEIIHNPTVSKQFQNMNIEDIPIEGGKKQFEAIDKGDV 826
            ERA+QI YEA+KQFP+EKIWITNEIIHNPTV+K+ + M++++IPI+ GKKQF+ +DK  V
Sbjct: 119  ERAVQIAYEARKQFPQEKIWITNEIIHNPTVNKRLEEMDVQNIPIKDGKKQFDVVDKDHV 178

Query: 825  VLLPAFGASVEEMLVLDNKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEETV 646
            V+LPAFGA+V+EMLVL++KNVQIVDTTCPWVSKVWN+VEKHKKGEYTSIIHGKYSHEETV
Sbjct: 179  VVLPAFGAAVDEMLVLNDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETV 238

Query: 645  ATASFAGKYIIVKSMAEATYVFDYILGGELDGSSSTKEAFLEKFKNAVSKGFDPDTDLVK 466
            ATASFAGKYIIVK+MAEATYV DYILGGELDGSSSTKEAFLEKFK AVSKGFDPD+DLVK
Sbjct: 239  ATASFAGKYIIVKNMAEATYVCDYILGGELDGSSSTKEAFLEKFKFAVSKGFDPDSDLVK 298

Query: 465  VGIANQTTMLKGETEEIGKLAERTMMRKHGVENINDHFMSFNTICDATQERQDAMYKLV 289
            VGIANQTTMLKGETEEIGKLAERTMMRK GVEN+N+HF+SFNTICDATQERQDAMYKLV
Sbjct: 299  VGIANQTTMLKGETEEIGKLAERTMMRKFGVENLNEHFISFNTICDATQERQDAMYKLV 357



 Score =  143 bits (360), Expect(2) = 0.0
 Identities = 66/78 (84%), Positives = 75/78 (96%)
 Frame = -2

Query: 236 AMYKLVEDKLDLMLVVGGWNSSNTSHLQEIAEEYKIPSYWVDNETRIGPGNKITYKLMHG 57
           AMYKLVE++LDLMLVVGGWNSSNTSHLQEI+EE  IPSYW+D+E RIGPGNKI++KLMHG
Sbjct: 352 AMYKLVEEQLDLMLVVGGWNSSNTSHLQEISEERGIPSYWIDSEQRIGPGNKISHKLMHG 411

Query: 56  ELVEKENWLPEGPVTIGV 3
           ELVEKEN+LPEGP+TIGV
Sbjct: 412 ELVEKENFLPEGPITIGV 429


>gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Camptotheca acuminata]
          Length = 459

 Score =  562 bits (1448), Expect(2) = 0.0
 Identities = 280/358 (78%), Positives = 310/358 (86%), Gaps = 4/358 (1%)
 Frame = -1

Query: 1350 MSISLQFSRFSPAADVFSPEFNRFPCRKLVRSVRCAAPTVTNG----DSQFDTKEFRKNL 1183
            M+ISLQF R S   D+   E   F  RK + SVRCA+    +     DS FD K FRKNL
Sbjct: 1    MAISLQFCRLSTRVDLSLLESKVFGYRKPL-SVRCASGESPSSSVAVDSDFDAKVFRKNL 59

Query: 1182 TRKANYNRKGFGRKDETLQDMKKEYYSDIIQTLKANGYEYTWGNVTVKLAESYGFCWGVE 1003
            TR  NYNRKGFG K+ETL+ M +EY SDII+TLK NG EYTWGNVTVKLAESYGFCWGVE
Sbjct: 60   TRSKNYNRKGFGHKEETLEPMNREYTSDIIKTLKENGNEYTWGNVTVKLAESYGFCWGVE 119

Query: 1002 RAIQITYEAKKQFPEEKIWITNEIIHNPTVSKQFQNMNIEDIPIEGGKKQFEAIDKGDVV 823
            RA+QI YEA+KQFP+EKIWITNEII NPTV+K+ + M +E+IPIE GKKQF+ +DKGDVV
Sbjct: 120  RAVQIAYEARKQFPDEKIWITNEIIRNPTVNKRLEEMEVENIPIEDGKKQFDVVDKGDVV 179

Query: 822  LLPAFGASVEEMLVLDNKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEETVA 643
            +LPAFGA V+EMLVL +KNVQIVDTTCPWVSKVWN+VEKHKKGEYTSIIHGKYSHEETVA
Sbjct: 180  ILPAFGAGVDEMLVLSDKNVQIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYSHEETVA 239

Query: 642  TASFAGKYIIVKSMAEATYVFDYILGGELDGSSSTKEAFLEKFKNAVSKGFDPDTDLVKV 463
            TASFAGK+IIVK+MAEATYV DYILGGELDGSSSTKEAFLEKFK AVSKGFDPD+DL KV
Sbjct: 240  TASFAGKFIIVKNMAEATYVCDYILGGELDGSSSTKEAFLEKFKYAVSKGFDPDSDLAKV 299

Query: 462  GIANQTTMLKGETEEIGKLAERTMMRKHGVENINDHFMSFNTICDATQERQDAMYKLV 289
            GIANQTTMLKGETEEIGKL ERTMMRK+GVEN+N+HF+SFNTICDATQERQDAMYKLV
Sbjct: 300  GIANQTTMLKGETEEIGKLVERTMMRKYGVENVNEHFISFNTICDATQERQDAMYKLV 357



 Score =  139 bits (351), Expect(2) = 0.0
 Identities = 63/78 (80%), Positives = 72/78 (92%)
 Frame = -2

Query: 236 AMYKLVEDKLDLMLVVGGWNSSNTSHLQEIAEEYKIPSYWVDNETRIGPGNKITYKLMHG 57
           AMYKLVE+ LDLMLV+GGWNSSNTSHLQEI+E   IPSYW+D+E R+GPGNKI++KL HG
Sbjct: 352 AMYKLVEENLDLMLVIGGWNSSNTSHLQEISELRGIPSYWIDSEQRVGPGNKISFKLNHG 411

Query: 56  ELVEKENWLPEGPVTIGV 3
           ELVEKENWLP+GPVTIGV
Sbjct: 412 ELVEKENWLPQGPVTIGV 429


>gb|ABM89226.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Picrorhiza
            kurrooa]
          Length = 462

 Score =  547 bits (1409), Expect(2) = 0.0
 Identities = 269/361 (74%), Positives = 311/361 (86%), Gaps = 7/361 (1%)
 Frame = -1

Query: 1350 MSISLQFSRFSPAADVFSPEFNRFPCRKLVRSVRC-------AAPTVTNGDSQFDTKEFR 1192
            M+ISLQFSR     ++  P+   F  RK   S RC       A+ +V+   S+FD K FR
Sbjct: 1    MAISLQFSRICTRTELSLPDTRIFRQRK-PSSFRCSSAGENAASSSVSGESSEFDAKVFR 59

Query: 1191 KNLTRKANYNRKGFGRKDETLQDMKKEYYSDIIQTLKANGYEYTWGNVTVKLAESYGFCW 1012
             NLTR  NYNRKGFGRK+ TL+ + KEY SDII+ LK NGYEYTWGN+TVKLAESYGFCW
Sbjct: 60   HNLTRSKNYNRKGFGRKEITLEQISKEYTSDIIKKLKDNGYEYTWGNITVKLAESYGFCW 119

Query: 1011 GVERAIQITYEAKKQFPEEKIWITNEIIHNPTVSKQFQNMNIEDIPIEGGKKQFEAIDKG 832
            GVERA+QI YEA+KQFP E IWITNEIIHNPTV+++ ++M++++IP++ G+KQF+ I+KG
Sbjct: 120  GVERAVQIAYEARKQFPTENIWITNEIIHNPTVNQRLEDMDVKNIPLDNGQKQFDVINKG 179

Query: 831  DVVLLPAFGASVEEMLVLDNKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEE 652
            DVV+LPAFGA+V+EML L  KNVQIVDTTCPWVSKVWNSVEKHKKGE+TSIIHGKYSHEE
Sbjct: 180  DVVVLPAFGAAVDEMLTLSEKNVQIVDTTCPWVSKVWNSVEKHKKGEHTSIIHGKYSHEE 239

Query: 651  TVATASFAGKYIIVKSMAEATYVFDYILGGELDGSSSTKEAFLEKFKNAVSKGFDPDTDL 472
            T+ATASFAGKYI+VK+MAEATYV DYILGG+LDGSSSTKEAFLEKFK A+SKGFDPDTDL
Sbjct: 240  TMATASFAGKYIVVKNMAEATYVRDYILGGKLDGSSSTKEAFLEKFKYALSKGFDPDTDL 299

Query: 471  VKVGIANQTTMLKGETEEIGKLAERTMMRKHGVENINDHFMSFNTICDATQERQDAMYKL 292
            VKVGIANQTTMLKGETE IGKLAERTMM+K+GVEN+N+HFMSFNTICDATQERQDAMYKL
Sbjct: 300  VKVGIANQTTMLKGETEAIGKLAERTMMQKYGVENVNNHFMSFNTICDATQERQDAMYKL 359

Query: 291  V 289
            V
Sbjct: 360  V 360



 Score =  142 bits (357), Expect(2) = 0.0
 Identities = 64/78 (82%), Positives = 74/78 (94%)
 Frame = -2

Query: 236 AMYKLVEDKLDLMLVVGGWNSSNTSHLQEIAEEYKIPSYWVDNETRIGPGNKITYKLMHG 57
           AMYKLV++K+DL++VVGGWNSSNTSHLQEIAE+  IPSYWVD++ RIGPGNKI+ KLMHG
Sbjct: 355 AMYKLVDEKVDLIIVVGGWNSSNTSHLQEIAEDRGIPSYWVDSDVRIGPGNKISCKLMHG 414

Query: 56  ELVEKENWLPEGPVTIGV 3
           ELVEKENWLPEGP+TIGV
Sbjct: 415 ELVEKENWLPEGPITIGV 432


>ref|NP_001234728.1| ISPH protein [Solanum lycopersicum] gi|262176919|gb|ACY27516.1| ISPH
            protein [Solanum lycopersicum]
          Length = 461

 Score =  543 bits (1398), Expect(2) = 0.0
 Identities = 263/359 (73%), Positives = 307/359 (85%), Gaps = 5/359 (1%)
 Frame = -1

Query: 1350 MSISLQFSRFSPAADVFSPEFNRFPCRKLVRSVRCAA-----PTVTNGDSQFDTKEFRKN 1186
            M+I LQFS  S   D+  PE   F   K    +RC+A      +    +S+FD K FRKN
Sbjct: 1    MAIPLQFSSISTRTDLSLPETRTFRLPKPFSVIRCSAGEPVPSSSATAESEFDAKVFRKN 60

Query: 1185 LTRKANYNRKGFGRKDETLQDMKKEYYSDIIQTLKANGYEYTWGNVTVKLAESYGFCWGV 1006
            LTR ANYNRKGFG K+ TL+ M +EY SDII+ LK N +EYTWGNVTVKLAESYGFCWGV
Sbjct: 61   LTRSANYNRKGFGHKEATLELMNREYTSDIIKKLKENEFEYTWGNVTVKLAESYGFCWGV 120

Query: 1005 ERAIQITYEAKKQFPEEKIWITNEIIHNPTVSKQFQNMNIEDIPIEGGKKQFEAIDKGDV 826
            ERA+QI YEA+KQFP E+IWITNEIIHNPTV+K+ ++M++++IP+E GKK F+ +DK DV
Sbjct: 121  ERAVQIAYEARKQFPTERIWITNEIIHNPTVNKRLEDMDVKNIPLEEGKKNFDVVDKDDV 180

Query: 825  VLLPAFGASVEEMLVLDNKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYSHEETV 646
            V+LPAFGA+V+EMLVL +KNVQIVDTTCPWV+KVWN+VEKHKKGEYTSIIHGKY+HEETV
Sbjct: 181  VVLPAFGAAVDEMLVLSDKNVQIVDTTCPWVTKVWNTVEKHKKGEYTSIIHGKYAHEETV 240

Query: 645  ATASFAGKYIIVKSMAEATYVFDYILGGELDGSSSTKEAFLEKFKNAVSKGFDPDTDLVK 466
            ATASFAGKYIIVK+MAEATYV DYILGG+LDGSSSTKEAF++KFK AVS+GFDPD DLVK
Sbjct: 241  ATASFAGKYIIVKNMAEATYVCDYILGGKLDGSSSTKEAFMQKFKYAVSEGFDPDVDLVK 300

Query: 465  VGIANQTTMLKGETEEIGKLAERTMMRKHGVENINDHFMSFNTICDATQERQDAMYKLV 289
             GIANQTTMLKGETE+IGKL ERTMM+K+GVEN+N+HF+SFNTICDATQERQDAMYKLV
Sbjct: 301  AGIANQTTMLKGETEDIGKLVERTMMQKYGVENVNNHFVSFNTICDATQERQDAMYKLV 359



 Score =  145 bits (367), Expect(2) = 0.0
 Identities = 66/78 (84%), Positives = 74/78 (94%)
 Frame = -2

Query: 236 AMYKLVEDKLDLMLVVGGWNSSNTSHLQEIAEEYKIPSYWVDNETRIGPGNKITYKLMHG 57
           AMYKLVE KLDLMLV+GGWNSSNTSHLQEIAEE  IPSYW+D+E R+GPGNKI+YKLMHG
Sbjct: 354 AMYKLVEQKLDLMLVIGGWNSSNTSHLQEIAEERGIPSYWIDSEQRVGPGNKISYKLMHG 413

Query: 56  ELVEKENWLPEGPVTIGV 3
           ELVEKEN+LPEGP+T+GV
Sbjct: 414 ELVEKENFLPEGPITVGV 431


>ref|XP_002284659.1| PREDICTED: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Vitis
            vinifera]
          Length = 465

 Score =  542 bits (1396), Expect(2) = 0.0
 Identities = 271/364 (74%), Positives = 305/364 (83%), Gaps = 10/364 (2%)
 Frame = -1

Query: 1350 MSISLQFSRFSPAADVFSPE----FNRFPCRKLVRSVRCAAPTVTNG------DSQFDTK 1201
            M++SLQ  RFS  +D   PE       F  RK + SVRC+  + ++       DS FD K
Sbjct: 1    MAMSLQLCRFSTFSDRSLPEAFAGIGVFRRRKPL-SVRCSGESESSSSSSVAVDSDFDAK 59

Query: 1200 EFRKNLTRKANYNRKGFGRKDETLQDMKKEYYSDIIQTLKANGYEYTWGNVTVKLAESYG 1021
             FR NLTR  NYNRKGFG KDETL+ M +EY SDII+TLK NG EY WGNVTVKLAE+YG
Sbjct: 60   VFRHNLTRSKNYNRKGFGHKDETLELMNREYTSDIIKTLKENGNEYKWGNVTVKLAEAYG 119

Query: 1020 FCWGVERAIQITYEAKKQFPEEKIWITNEIIHNPTVSKQFQNMNIEDIPIEGGKKQFEAI 841
            FCWGVERA+QI YEA+KQFPEEKIWITNEIIHNPTV+++   M ++DIPI+ G+KQFE +
Sbjct: 120  FCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNQRLAEMEVKDIPIDDGQKQFEVV 179

Query: 840  DKGDVVLLPAFGASVEEMLVLDNKNVQIVDTTCPWVSKVWNSVEKHKKGEYTSIIHGKYS 661
            DKGDVV+LPAFGA+V+EML L NKNVQIVDTTCPWVSKVWN VEKHKKGEYTSIIHGKYS
Sbjct: 180  DKGDVVILPAFGAAVDEMLTLSNKNVQIVDTTCPWVSKVWNIVEKHKKGEYTSIIHGKYS 239

Query: 660  HEETVATASFAGKYIIVKSMAEATYVFDYILGGELDGSSSTKEAFLEKFKNAVSKGFDPD 481
            HEET+ATASFAGKYIIVK+MAEA YV DYILGGELDGSSST+E F EKFK A+S+GFDPD
Sbjct: 240  HEETIATASFAGKYIIVKNMAEAMYVCDYILGGELDGSSSTREEFFEKFKFAISEGFDPD 299

Query: 480  TDLVKVGIANQTTMLKGETEEIGKLAERTMMRKHGVENINDHFMSFNTICDATQERQDAM 301
             DL KVGIANQTTMLKGETEEIGKL ERTMMRK+GVEN+N+HF+SFNTICDATQERQDAM
Sbjct: 300  IDLSKVGIANQTTMLKGETEEIGKLVERTMMRKYGVENVNNHFISFNTICDATQERQDAM 359

Query: 300  YKLV 289
            YKLV
Sbjct: 360  YKLV 363



 Score =  146 bits (368), Expect(2) = 0.0
 Identities = 66/78 (84%), Positives = 75/78 (96%)
 Frame = -2

Query: 236 AMYKLVEDKLDLMLVVGGWNSSNTSHLQEIAEEYKIPSYWVDNETRIGPGNKITYKLMHG 57
           AMYKLVE+KLD+MLVVGGWNSSNTSHLQEIAE+  IPSYW+D+E RIGPGN+I++KLMHG
Sbjct: 358 AMYKLVEEKLDVMLVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNRISHKLMHG 417

Query: 56  ELVEKENWLPEGPVTIGV 3
           ELVEKENWLPEGP+TIGV
Sbjct: 418 ELVEKENWLPEGPITIGV 435


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