BLASTX nr result

ID: Cnidium21_contig00004713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004713
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   194   2e-47
ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [S...   186   4e-45
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19...   185   6e-45
ref|NP_001130751.1| uncharacterized protein LOC100191855 [Zea ma...   184   1e-44
ref|XP_004172951.1| PREDICTED: U-box domain-containing protein 7...   184   2e-44

>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  194 bits (492), Expect = 2e-47
 Identities = 111/197 (56%), Positives = 130/197 (65%), Gaps = 6/197 (3%)
 Frame = -2

Query: 684 FVSASLDRTWKFYDLSSDLRPIQVACVTGSERFMTAAFHPDGHIIGTGTS-GFVRFWDVA 508
           FV+ASLD TW FYDLSS L   QVA  +GSE + +AAFHPDG I+GTGTS   V+ WDV 
Sbjct: 326 FVTASLDNTWCFYDLSSGLCLTQVADASGSEGYTSAAFHPDGLILGTGTSEALVKIWDVK 385

Query: 507 KQGDIIKIDAHAGPVTSISFSENGFHLATAAEDGVKLWDLRFLRTFMTF-PSDRKAHKCP 331
            Q ++ + D H G VT+ISFSENG+ LATAA DGVKLWDLR LR F TF P D       
Sbjct: 386 SQANVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNS 445

Query: 330 VDFDLSGRYLVSGGSHISAY---NITSAPNCEIITTFPK-SGIAKISSLKFGKDAKYVAA 163
           V+FD SG YL   GS I  Y   N+ S  NC  I TFP  SG  K + +KFG DAKY+A 
Sbjct: 446 VEFDHSGNYLAIAGSDIRVYQVANVKSEWNC--IKTFPDLSGTGKATCVKFGPDAKYLAV 503

Query: 162 GSVDSNQLSLFSLPKED 112
           GS+D N L +F LP +D
Sbjct: 504 GSMDRN-LRIFGLPGDD 519


>ref|XP_002464506.1| hypothetical protein SORBIDRAFT_01g019790 [Sorghum bicolor]
           gi|241918360|gb|EER91504.1| hypothetical protein
           SORBIDRAFT_01g019790 [Sorghum bicolor]
          Length = 535

 Score =  186 bits (472), Expect = 4e-45
 Identities = 101/195 (51%), Positives = 128/195 (65%), Gaps = 4/195 (2%)
 Frame = -2

Query: 684 FVSASLDRTWKFYDLSSDLRPIQVACVTGSERFMTAAFHPDGHIIGTGTSGFV-RFWDVA 508
           FVSAS D +W FYD+S+     QV   +G E + +AAFHPDG I+GTGT+  V + WDV 
Sbjct: 332 FVSASKDNSWCFYDMSTGSCLTQVGEASGQEGYTSAAFHPDGLILGTGTTDAVAKIWDVK 391

Query: 507 KQGDIIKIDAHAGPVTSISFSENGFHLATAAEDGVKLWDLRFLRTFMTF-PSDRKAHKCP 331
            Q ++ K + H GPVT++SFSENG+ LATAA DGVKLWDLR LR F TF P D       
Sbjct: 392 TQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNT 451

Query: 330 VDFDLSGRYLVSGGSHISAYNITSAPN-CEIITTFPK-SGIAKISSLKFGKDAKYVAAGS 157
           V+FD SG YL  GGS I  Y + +  +   +I T P  SG  K++S+KFG DAKY+A GS
Sbjct: 452 VEFDFSGNYLAIGGSDIRVYQVANVKSEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGS 511

Query: 156 VDSNQLSLFSLPKED 112
           +D N L +F LP +D
Sbjct: 512 MDRN-LRIFGLPGDD 525


>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
           pre-mRNA-splicing factor 19 [Zea mays]
           gi|224030373|gb|ACN34262.1| unknown [Zea mays]
           gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
           factor 19 isoform 1 [Zea mays]
           gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
           factor 19 isoform 2 [Zea mays]
          Length = 526

 Score =  185 bits (470), Expect = 6e-45
 Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
 Frame = -2

Query: 684 FVSASLDRTWKFYDLSSDLRPIQVACVTGSERFMTAAFHPDGHIIGTGTS-GFVRFWDVA 508
           FVSAS D +W FYD+S+     QV   +G E + +A+FHPDG I+GTGT+   V+ WDV 
Sbjct: 323 FVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVK 382

Query: 507 KQGDIIKIDAHAGPVTSISFSENGFHLATAAEDGVKLWDLRFLRTFMTF-PSDRKAHKCP 331
            Q ++ K + H GPVT++SFSENG+ LATAA DGVKLWDLR LR F TF P D       
Sbjct: 383 TQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNT 442

Query: 330 VDFDLSGRYLVSGGSHISAYNITSA-PNCEIITTFPK-SGIAKISSLKFGKDAKYVAAGS 157
           V+FD SG YL  GGS I  Y + +      +I T P  SG  K++S+KFG DAKY+A GS
Sbjct: 443 VEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGS 502

Query: 156 VDSNQLSLFSLPKED 112
           +D N L +F LP +D
Sbjct: 503 MDRN-LRIFGLPGDD 516


>ref|NP_001130751.1| uncharacterized protein LOC100191855 [Zea mays]
           gi|194690018|gb|ACF79093.1| unknown [Zea mays]
           gi|413934082|gb|AFW68633.1| hypothetical protein
           ZEAMMB73_254634 [Zea mays]
          Length = 526

 Score =  184 bits (468), Expect = 1e-44
 Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
 Frame = -2

Query: 684 FVSASLDRTWKFYDLSSDLRPIQVACVTGSERFMTAAFHPDGHIIGTGTS-GFVRFWDVA 508
           FVSAS D +W FYD+S+     QV   +G E + +A+FHPDG I+GTGT+   V+ WDV 
Sbjct: 323 FVSASKDNSWCFYDISTGSCLTQVGDASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVK 382

Query: 507 KQGDIIKIDAHAGPVTSISFSENGFHLATAAEDGVKLWDLRFLRTFMTF-PSDRKAHKCP 331
            Q ++ K + H GPVT++SFSENG+ LATAA DGVKLWDLR LR F TF P D       
Sbjct: 383 AQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDLDTPTNT 442

Query: 330 VDFDLSGRYLVSGGSHISAYNITSA-PNCEIITTFPK-SGIAKISSLKFGKDAKYVAAGS 157
           V+FD SG YL  GGS I  Y + +      +I T P  SG  K++S+KFG DAKY+A GS
Sbjct: 443 VEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGVDAKYIAIGS 502

Query: 156 VDSNQLSLFSLPKED 112
           +D N L +F LP +D
Sbjct: 503 MDRN-LRIFGLPGDD 516


>ref|XP_004172951.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis
           sativus]
          Length = 299

 Score =  184 bits (466), Expect = 2e-44
 Identities = 107/197 (54%), Positives = 127/197 (64%), Gaps = 6/197 (3%)
 Frame = -2

Query: 684 FVSASLDRTWKFYDLSSDLRPIQVACVTGSERFMTAAFHPDGHIIGTGTS-GFVRFWDVA 508
           FV+ASLD TW FY+L+S L   QVA  + +E + +AAFHPDG I+GTGTS   V+ WDV 
Sbjct: 101 FVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVK 160

Query: 507 KQGDIIKIDAHAGPVTSISFSENGFHLATAAEDGVKLWDLRFLRTFMTF-PSDRKAHKCP 331
            Q ++ K D H G VT+ISFSENG+ LATAA DGVKLWDLR L+ F TF P D       
Sbjct: 161 SQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNS 220

Query: 330 VDFDLSGRYLVSGGSHISAYNITSAP---NCEIITTFPK-SGIAKISSLKFGKDAKYVAA 163
           VDFD SG YL   GS I  Y + S     NC  I T P  SG  K + LKFG DAKY+A 
Sbjct: 221 VDFDHSGSYLAIAGSDIRVYQVASVKSEWNC--IKTLPDLSGTGKATCLKFGPDAKYLAV 278

Query: 162 GSVDSNQLSLFSLPKED 112
           GS+D N L +F +P ED
Sbjct: 279 GSMDRN-LRIFGVPGED 294


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