BLASTX nr result

ID: Cnidium21_contig00004686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004686
         (1889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [...   259   e-113
ref|NP_001238194.1| uncharacterized protein LOC100306140 [Glycin...   307   7e-81
ref|YP_087012.1| ribosomal protein S7 [Panax ginseng] gi|5222087...   301   3e-79
gb|AEX94156.1| ribosomal protein S7 (chloroplast) [Haworthia cym...   301   4e-79
gb|ADD29893.1| ribosomal protein S7 [Ilex cornuta] gi|340806996|...   301   4e-79

>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
            gi|355488626|gb|AES69829.1| NAD(P)H-quinone
            oxidoreductase subunit 2 A [Medicago truncatula]
          Length = 871

 Score =  259 bits (661), Expect(2) = e-113
 Identities = 133/151 (88%), Positives = 143/151 (94%), Gaps = 2/151 (1%)
 Frame = +3

Query: 1128 RRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLSVL 1307
            ++GTAE+KTAKSDPIYRNRLVNMLVNRI+KHGKKSLAYQIIYRA+K+IQQKT+TNPL VL
Sbjct: 160  QQGTAEKKTAKSDPIYRNRLVNMLVNRIMKHGKKSLAYQIIYRAMKRIQQKTKTNPLYVL 219

Query: 1308 RQAIRGVTPDIAVKA--RRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 1481
            RQAIRGVTPDIAVK   RRV GS  +VP+EIGSTQGKALAIRWLL ASRKRPGRNMAFKL
Sbjct: 220  RQAIRGVTPDIAVKTKTRRVSGSNKKVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 279

Query: 1482 SSELVDAAKGSGDAIRKKEETHRMAEANRAF 1574
            SSELVDAAKGSGDAIRKK+ETHRMAEANRAF
Sbjct: 280  SSELVDAAKGSGDAIRKKQETHRMAEANRAF 310



 Score =  178 bits (452), Expect(2) = e-113
 Identities = 94/117 (80%), Positives = 98/117 (83%)
 Frame = +2

Query: 692  NA*KDPMTSKELNEEPYEVKISCTFL*SGSKGDLSVNFSTITPKKPNSALRKVARVRLTS 871
            N  KDP+TSKELNE+               K DLSVNFSTITPKKPNSALRKVARVRLTS
Sbjct: 64   NEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRLTS 108

Query: 872  GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSK 1042
            GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG ++
Sbjct: 109  GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGTAE 165


>ref|NP_001238194.1| uncharacterized protein LOC100306140 [Glycine max]
            gi|255627661|gb|ACU14175.1| unknown [Glycine max]
          Length = 173

 Score =  307 bits (786), Expect = 7e-81
 Identities = 156/159 (98%), Positives = 158/159 (99%)
 Frame = +3

Query: 1110 PFTLMSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTET 1289
            PFTLMSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTET
Sbjct: 15   PFTLMSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTET 74

Query: 1290 NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNM 1469
            NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVP+EIGSTQGKALAIRWLL ASRKRPGRNM
Sbjct: 75   NPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNM 134

Query: 1470 AFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 1586
            AFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 135  AFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 173


>ref|YP_087012.1| ribosomal protein S7 [Panax ginseng] gi|52220871|ref|YP_087025.1|
            ribosomal protein S7 [Panax ginseng]
            gi|114107178|ref|YP_740163.1| ribosomal protein S7
            [Daucus carota] gi|114107193|ref|YP_740176.1| ribosomal
            protein S7 [Daucus carota]
            gi|323149128|ref|YP_004222692.1| ribosomal protein S7
            [Anthriscus cerefolium] gi|323149142|ref|YP_004222705.1|
            ribosomal protein S7 [Anthriscus cerefolium]
            gi|359422190|ref|YP_004935599.1| ribosomal protein S7
            (chloroplast) [Eleutherococcus senticosus]
            gi|359422203|ref|YP_004935612.1| ribosomal protein S7
            (chloroplast) [Eleutherococcus senticosus]
            gi|62287231|sp|Q68RU7.1|RR7_PANGI RecName: Full=30S
            ribosomal protein S7, chloroplastic
            gi|122246293|sp|Q0G9Q3.1|RR7_DAUCA RecName: Full=30S
            ribosomal protein S7, chloroplastic
            gi|51235359|gb|AAT98555.1| ribosomal protein S7 [Panax
            ginseng] gi|51235374|gb|AAT98570.1| ribosomal protein S7
            [Panax ginseng] gi|113200953|gb|ABI32469.1| ribosomal
            protein S7 [Daucus carota] gi|113200968|gb|ABI32484.1|
            ribosomal protein S7 [Daucus carota]
            gi|156573677|gb|ABU85171.1| ribosomal protein S7 [Anethum
            graveolens] gi|289645621|gb|ADD13684.1| ribosomal protein
            S7 [Anthriscus cerefolium] gi|289645635|gb|ADD13698.1|
            ribosomal protein S7 [Anthriscus cerefolium]
            gi|290487012|gb|ADD29890.1| ribosomal protein S7 [Aucuba
            japonica] gi|306486211|gb|ADM92747.1| ribosomal protein
            S7 [Davidia involucrata] gi|340807110|gb|AEK71711.1|
            ribosomal protein S7 [Aucuba japonica]
            gi|347448253|gb|AEO92665.1| ribosomal protein S7
            (chloroplast) [Eleutherococcus senticosus]
            gi|347448266|gb|AEO92678.1| ribosomal protein S7
            (chloroplast) [Eleutherococcus senticosus]
          Length = 155

 Score =  301 bits (772), Expect = 3e-79
 Identities = 155/155 (100%), Positives = 155/155 (100%)
 Frame = +3

Query: 1122 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS 1301
            MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS
Sbjct: 1    MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS 60

Query: 1302 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 1481
            VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL
Sbjct: 61   VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 120

Query: 1482 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 1586
            SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121  SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155


>gb|AEX94156.1| ribosomal protein S7 (chloroplast) [Haworthia cymbiformis]
          Length = 155

 Score =  301 bits (771), Expect = 4e-79
 Identities = 154/155 (99%), Positives = 155/155 (100%)
 Frame = +3

Query: 1122 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS 1301
            MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS
Sbjct: 1    MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS 60

Query: 1302 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 1481
            VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL
Sbjct: 61   VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 120

Query: 1482 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 1586
            SSELVDAAKGSGDA+RKKEETHRMAEANRAFAHFR
Sbjct: 121  SSELVDAAKGSGDAVRKKEETHRMAEANRAFAHFR 155


>gb|ADD29893.1| ribosomal protein S7 [Ilex cornuta] gi|340806996|gb|AEK71617.1|
            ribosomal protein S7 [Ilex cornuta]
          Length = 155

 Score =  301 bits (771), Expect = 4e-79
 Identities = 154/155 (99%), Positives = 155/155 (100%)
 Frame = +3

Query: 1122 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAVKKIQQKTETNPLS 1301
            MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAVKKIQQKTETNPLS
Sbjct: 1    MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIVYRAVKKIQQKTETNPLS 60

Query: 1302 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 1481
            VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL
Sbjct: 61   VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRKRPGRNMAFKL 120

Query: 1482 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 1586
            SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121  SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155


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