BLASTX nr result
ID: Cnidium21_contig00004630
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00004630 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265... 103 1e-20 emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera] 101 7e-20 gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ... 99 4e-19 gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum] 97 1e-18 ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-18 >ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265608 [Vitis vinifera] gi|296085734|emb|CBI29539.3| unnamed protein product [Vitis vinifera] Length = 363 Score = 103 bits (257), Expect = 1e-20 Identities = 56/105 (53%), Positives = 62/105 (59%) Frame = +1 Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282 YR E+GD KSSE EV EGERPRR YER SGT RG Sbjct: 112 YRPSEEGDTGKSSERRGSGGPRSPYRGGGRRGGFSNG--EVGEGERPRRAYERRSGTGRG 169 Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417 NE KRDGAGRGNWGTP D+IAP +EEP+N+ EKN AEK + E Sbjct: 170 NEI-KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEE 213 >emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera] Length = 363 Score = 101 bits (251), Expect = 7e-20 Identities = 55/105 (52%), Positives = 61/105 (58%) Frame = +1 Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282 YR E+GD KS E EV EGERPRR YER SGT RG Sbjct: 112 YRPSEEGDTGKSFERRGSGGPRSPYRGGGRRGGFSNG--EVGEGERPRRAYERRSGTGRG 169 Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417 NE KRDGAGRGNWGTP D+IAP +EEP+N+ EKN AEK + E Sbjct: 170 NEI-KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEE 213 >gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum] Length = 299 Score = 99.0 bits (245), Expect = 4e-19 Identities = 54/123 (43%), Positives = 63/123 (51%) Frame = +1 Query: 49 DSADXXXXXXXXXXXXXXYRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVA 228 +SAD YR E G+ K SE Sbjct: 26 ESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYGGPRGGFHGGRRGGFNNGDAAEG 85 Query: 229 EGERPRRVYERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNV 408 EGERPRRV++R SGT RGNE+ KR+G+GRGNWGTP DDIA +E PVNDGEK V+AEK Sbjct: 86 EGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEAEKEA 145 Query: 409 DAE 417 E Sbjct: 146 GQE 148 >gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum] Length = 363 Score = 97.1 bits (240), Expect = 1e-18 Identities = 51/105 (48%), Positives = 58/105 (55%) Frame = +1 Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282 Y PE G+ K SE EGERPRRV++R SGT RG Sbjct: 109 YSAPEDGESGKVSERRGGYGGSRGGFHGGRRGGFNNGDSAEGEGERPRRVFDRRSGTGRG 168 Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417 NEF KR+G+GRGNWGT DDIAP +E PV DGEK V+AEK E Sbjct: 169 NEFIKREGSGRGNWGTTADDIAPETEVPVIDGEKIVEAEKQAGQE 213 >ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|222840805|gb|EEE78352.1| predicted protein [Populus trichocarpa] Length = 363 Score = 96.3 bits (238), Expect = 2e-18 Identities = 46/66 (69%), Positives = 52/66 (78%) Frame = +1 Query: 220 EVAEGERPRRVYERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAE 399 E EGERPRR+YERHSGT RGNE KR+G+GRGNWGTPTD+IAP +E+PV D EKNV E Sbjct: 143 EDGEGERPRRMYERHSGTGRGNEI-KREGSGRGNWGTPTDEIAPETEDPVVDNEKNVITE 201 Query: 400 KNVDAE 417 K E Sbjct: 202 KQQGEE 207