BLASTX nr result

ID: Cnidium21_contig00004630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004630
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265...   103   1e-20
emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]   101   7e-20
gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana ...    99   4e-19
gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]    97   1e-18
ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18

>ref|XP_002266051.1| PREDICTED: uncharacterized protein LOC100265608 [Vitis vinifera]
           gi|296085734|emb|CBI29539.3| unnamed protein product
           [Vitis vinifera]
          Length = 363

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/105 (53%), Positives = 62/105 (59%)
 Frame = +1

Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282
           YR  E+GD  KSSE                         EV EGERPRR YER SGT RG
Sbjct: 112 YRPSEEGDTGKSSERRGSGGPRSPYRGGGRRGGFSNG--EVGEGERPRRAYERRSGTGRG 169

Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417
           NE  KRDGAGRGNWGTP D+IAP +EEP+N+ EKN  AEK +  E
Sbjct: 170 NEI-KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEE 213


>emb|CAN75176.1| hypothetical protein VITISV_016687 [Vitis vinifera]
          Length = 363

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/105 (52%), Positives = 61/105 (58%)
 Frame = +1

Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282
           YR  E+GD  KS E                         EV EGERPRR YER SGT RG
Sbjct: 112 YRPSEEGDTGKSFERRGSGGPRSPYRGGGRRGGFSNG--EVGEGERPRRAYERRSGTGRG 169

Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417
           NE  KRDGAGRGNWGTP D+IAP +EEP+N+ EKN  AEK +  E
Sbjct: 170 NEI-KRDGAGRGNWGTPADEIAPENEEPINETEKNTSAEKQLGEE 213


>gb|AAF14242.1|AF110226_1 nuclear RNA binding protein [Nicotiana tabacum]
          Length = 299

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/123 (43%), Positives = 63/123 (51%)
 Frame = +1

Query: 49  DSADXXXXXXXXXXXXXXYRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVA 228
           +SAD              YR  E G+  K SE                            
Sbjct: 26  ESADDENAFGSNNGFSGRYRVQEDGESGKLSERRGGYGGPRGGFHGGRRGGFNNGDAAEG 85

Query: 229 EGERPRRVYERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNV 408
           EGERPRRV++R SGT RGNE+ KR+G+GRGNWGTP DDIA  +E PVNDGEK V+AEK  
Sbjct: 86  EGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGTPADDIAQETEVPVNDGEKIVEAEKEA 145

Query: 409 DAE 417
             E
Sbjct: 146 GQE 148


>gb|ABA81884.1| nuclear RNA binding protein-like [Solanum tuberosum]
          Length = 363

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/105 (48%), Positives = 58/105 (55%)
 Frame = +1

Query: 103 YRQPEQGDLEKSSEXXXXXXXXXXXXXXXXXXXXXXXXXEVAEGERPRRVYERHSGTARG 282
           Y  PE G+  K SE                            EGERPRRV++R SGT RG
Sbjct: 109 YSAPEDGESGKVSERRGGYGGSRGGFHGGRRGGFNNGDSAEGEGERPRRVFDRRSGTGRG 168

Query: 283 NEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAEKNVDAE 417
           NEF KR+G+GRGNWGT  DDIAP +E PV DGEK V+AEK    E
Sbjct: 169 NEFIKREGSGRGNWGTTADDIAPETEVPVIDGEKIVEAEKQAGQE 213


>ref|XP_002303373.1| predicted protein [Populus trichocarpa] gi|222840805|gb|EEE78352.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/66 (69%), Positives = 52/66 (78%)
 Frame = +1

Query: 220 EVAEGERPRRVYERHSGTARGNEFSKRDGAGRGNWGTPTDDIAPVSEEPVNDGEKNVDAE 399
           E  EGERPRR+YERHSGT RGNE  KR+G+GRGNWGTPTD+IAP +E+PV D EKNV  E
Sbjct: 143 EDGEGERPRRMYERHSGTGRGNEI-KREGSGRGNWGTPTDEIAPETEDPVVDNEKNVITE 201

Query: 400 KNVDAE 417
           K    E
Sbjct: 202 KQQGEE 207


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