BLASTX nr result

ID: Cnidium21_contig00004602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004602
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    173   8e-41
ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   172   2e-40
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788...   167   4e-39
ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820...   164   4e-38

>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  173 bits (438), Expect = 8e-41
 Identities = 86/122 (70%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
 Frame = -3

Query: 523 DQDXXXXXXXXXXXXXFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 344
           DQD             FWVSFM VMQGVVTFFGRVAMLIDQNTQAFHM MSA+LQLFDRS
Sbjct: 175 DQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFDRS 234

Query: 343 GMLYGELARFVFRLLGIRTKPQKVQPPGNG-LPGPHNFPGGPNYVEGPKVASSGAWDGVW 167
           GMLYGELARFV RLLG++TKP KV PPG G LPGPH+  G  N++EGPK A S  WD VW
Sbjct: 235 GMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDNVW 294

Query: 166 GN 161
           G+
Sbjct: 295 GD 296



 Score =  120 bits (301), Expect = 6e-25
 Identities = 55/80 (68%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = -3

Query: 1063 MEN-PNRAQQSAAPPKPWERSGSSSGPAPFKPPSSGSTSDIVEASGTARPGEIVTTADAN 887
            M+N P +   ++ PPKPWER+GSSSGP PFKPPSSG+TSD+VEASGTARPGEIV+TA+ N
Sbjct: 1    MDNGPPQPSGNSPPPKPWERAGSSSGPTPFKPPSSGNTSDVVEASGTARPGEIVSTANRN 60

Query: 886  TVANRNALGRPLPSRPWEQQ 827
            T  N + L RP+P RPWEQQ
Sbjct: 61   TTVNNSTLARPVPPRPWEQQ 80


>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  172 bits (435), Expect = 2e-40
 Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
 Frame = -3

Query: 523 DQDXXXXXXXXXXXXXFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 344
           DQD             FW+SF+RVMQGVV FFGR+++LIDQNTQAFHMFM+A+LQLFDR+
Sbjct: 188 DQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLFDRT 247

Query: 343 GMLYGELARFVFRLLGIRTKPQKVQPPG-NGLPGPHNFPGGPNYVEGPKVASSGAWDGVW 167
           G+LYGELARFV RLLGI+TKP+KVQ PG +GLP PHN  G  NY+EGPK A SG WD VW
Sbjct: 248 GLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHGNQNYIEGPKGAPSGGWDNVW 307

Query: 166 GNEPSN 149
           G+  S+
Sbjct: 308 GDNGSS 313



 Score =  105 bits (263), Expect = 1e-20
 Identities = 52/69 (75%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = -3

Query: 1027 PPKPWERSG-SSSGPAPFKPPSSGSTSDIVEASGTARPGEIVTTADANT-VANRNALGRP 854
            P KPWERSG SSSGP PFKPP+ GSTSD+VEASGTARPGEIV  A+  T V N N LGRP
Sbjct: 27   PAKPWERSGTSSSGPTPFKPPTPGSTSDVVEASGTARPGEIVPAANRTTAVNNTNTLGRP 86

Query: 853  LPSRPWEQQ 827
            +P+RPWEQQ
Sbjct: 87   VPTRPWEQQ 95


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  169 bits (428), Expect = 1e-39
 Identities = 84/126 (66%), Positives = 95/126 (75%), Gaps = 1/126 (0%)
 Frame = -3

Query: 523 DQDXXXXXXXXXXXXXFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 344
           DQD             FWVSF++VMQGVV  FGR++ LIDQNTQAFHMFMSALLQLFDRS
Sbjct: 13  DQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLFDRS 72

Query: 343 GMLYGELARFVFRLLGIRTKPQKVQPPG-NGLPGPHNFPGGPNYVEGPKVASSGAWDGVW 167
           G+LYGELARF  RLLGI++KP+KVQ PG +G P PHN  G  NY+EGPK A SGAWD VW
Sbjct: 73  GLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSGAWDNVW 132

Query: 166 GNEPSN 149
           G+  SN
Sbjct: 133 GDGTSN 138


>ref|XP_003546796.1| PREDICTED: uncharacterized protein LOC100788885 [Glycine max]
          Length = 297

 Score =  167 bits (423), Expect = 4e-39
 Identities = 84/127 (66%), Positives = 95/127 (74%), Gaps = 5/127 (3%)
 Frame = -3

Query: 523 DQDXXXXXXXXXXXXXFWVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRS 344
           DQD             FW+S +RVMQGVV FFGR+++LIDQNTQAFH+FM+ALLQLFDRS
Sbjct: 168 DQDPNDPFGAPPSPPGFWISVLRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLFDRS 227

Query: 343 GMLYGELARFVFRLLGIRTKPQKVQPPG-NGL----PGPHNFPGGPNYVEGPKVASSGAW 179
           GMLYGELARFV RLLGIRTK +KV PPG NG     PGPHN  G  NY+E PK A SG+W
Sbjct: 228 GMLYGELARFVLRLLGIRTKSKKVYPPGPNGQPLLGPGPHNPSGNVNYIEAPKAAPSGSW 287

Query: 178 DGVWGNE 158
           D VWGN+
Sbjct: 288 DNVWGND 294



 Score =  122 bits (306), Expect = 2e-25
 Identities = 53/78 (67%), Positives = 67/78 (85%)
 Frame = -3

Query: 1063 MENPNRAQQSAAPPKPWERSGSSSGPAPFKPPSSGSTSDIVEASGTARPGEIVTTADANT 884
            ME   + Q ++ PPKPWE++GSSSGPAPFKPPS+G+TSD+VEASGTA+PGEIV+++D + 
Sbjct: 1    MEPKTQPQANSPPPKPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSA 60

Query: 883  VANRNALGRPLPSRPWEQ 830
              NRN LGRP+PSRPWEQ
Sbjct: 61   AVNRNTLGRPVPSRPWEQ 78


>ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]
          Length = 280

 Score =  164 bits (415), Expect = 4e-38
 Identities = 78/108 (72%), Positives = 89/108 (82%), Gaps = 3/108 (2%)
 Frame = -3

Query: 472 WVSFMRVMQGVVTFFGRVAMLIDQNTQAFHMFMSALLQLFDRSGMLYGELARFVFRLLGI 293
           W+SFMRVMQGVV FFGR++MLIDQNTQAFHMFM+ALLQLFDRSG+LYGELARFV RLLGI
Sbjct: 170 WISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLFDRSGVLYGELARFVLRLLGI 229

Query: 292 RTKPQKVQPPGNG---LPGPHNFPGGPNYVEGPKVASSGAWDGVWGNE 158
           RTKP+K+ PPG     LPG HN     N++EG K A SG+WD VW N+
Sbjct: 230 RTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGSWDNVWEND 277



 Score =  119 bits (297), Expect = 2e-24
 Identities = 52/68 (76%), Positives = 60/68 (88%)
 Frame = -3

Query: 1033 AAPPKPWERSGSSSGPAPFKPPSSGSTSDIVEASGTARPGEIVTTADANTVANRNALGRP 854
            +APPKPWE++ SSSGPAPFKPPS+GSTSD+VEASGTA+PGEIV  +D     NRNALGRP
Sbjct: 6    SAPPKPWEKAASSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVPASDKTATVNRNALGRP 65

Query: 853  LPSRPWEQ 830
            LP+RPWEQ
Sbjct: 66   LPTRPWEQ 73


Top