BLASTX nr result

ID: Cnidium21_contig00004542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004542
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   232   8e-59
gb|AAT99735.1| SKP1 [Nicotiana tabacum]                               231   1e-58
gb|AFB18000.1| SKP1 protein [Nicotiana tabacum]                       231   2e-58
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   231   2e-58
gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. ...   230   4e-58

>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  232 bits (592), Expect = 8e-59
 Identities = 121/156 (77%), Positives = 129/156 (82%)
 Frame = -2

Query: 811 SESKMIMLKSSDNETFXXXXXXXXESQTIKHMIEDDCANTTIPLPNVSSKILAKVIEYCK 632
           S S+ I LKSSD ETF        ESQTIKHMIEDDCA+  IPLPNV+SKIL+KVIEYCK
Sbjct: 2   STSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCK 61

Query: 631 KHVESPKTDEVNKSVDDELKTFDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 452
           KHVE+ K+D+   SVDDELKT+DAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM
Sbjct: 62  KHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 121

Query: 451 IKGKTPEEIRKTFNIKNDFTPXXXXXXXXENAWAFE 344
           IKGKTPEEIRKTFNIKNDFTP        EN WAFE
Sbjct: 122 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>gb|AAT99735.1| SKP1 [Nicotiana tabacum]
          Length = 155

 Score =  231 bits (590), Expect = 1e-58
 Identities = 120/156 (76%), Positives = 133/156 (85%)
 Frame = -2

Query: 811 SESKMIMLKSSDNETFXXXXXXXXESQTIKHMIEDDCANTTIPLPNVSSKILAKVIEYCK 632
           S SKMI+LKSSD ETF        ESQTIKHMIEDDCA+T+IPLPNV+SKILAKVIEYCK
Sbjct: 2   SSSKMIVLKSSDGETFEVEEAVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCK 61

Query: 631 KHVESPKTDEVNKSVDDELKTFDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 452
           +HV++ KT++  K+ +DELK FD++FVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM
Sbjct: 62  RHVDATKTED--KASEDELKGFDSDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 451 IKGKTPEEIRKTFNIKNDFTPXXXXXXXXENAWAFE 344
           IKGKTPEEIRKTFNIKNDFTP        ENAWAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155


>gb|AFB18000.1| SKP1 protein [Nicotiana tabacum]
          Length = 155

 Score =  231 bits (589), Expect = 2e-58
 Identities = 120/156 (76%), Positives = 132/156 (84%)
 Frame = -2

Query: 811 SESKMIMLKSSDNETFXXXXXXXXESQTIKHMIEDDCANTTIPLPNVSSKILAKVIEYCK 632
           S SKMI+LKSSD ETF        ESQTIKHMIEDDCA T+IPLPNV+SKILAKVIEYCK
Sbjct: 2   SSSKMIVLKSSDGETFEVEEAVALESQTIKHMIEDDCAGTSIPLPNVTSKILAKVIEYCK 61

Query: 631 KHVESPKTDEVNKSVDDELKTFDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 452
           +HV++ KT++  K+ +DELK FD++FVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM
Sbjct: 62  RHVDATKTED--KASEDELKGFDSDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 451 IKGKTPEEIRKTFNIKNDFTPXXXXXXXXENAWAFE 344
           IKGKTPEEIRKTFNIKNDFTP        ENAWAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155


>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  231 bits (588), Expect = 2e-58
 Identities = 120/158 (75%), Positives = 130/158 (82%)
 Frame = -2

Query: 817 MSSESKMIMLKSSDNETFXXXXXXXXESQTIKHMIEDDCANTTIPLPNVSSKILAKVIEY 638
           MSS  + I LKSSD E+F        ESQTIKHMIEDDCA+  IPLPNV+SKILAKVIEY
Sbjct: 1   MSSSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEY 60

Query: 637 CKKHVESPKTDEVNKSVDDELKTFDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 458
           CKKHVE+PKTD+  +S DDELK++DA+FVKVDQATLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  CKKHVEAPKTDD--RSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVA 118

Query: 457 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENAWAFE 344
           DMIKGKTPEEIRKTFNIKNDFTP        EN WAFE
Sbjct: 119 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. inflata]
           gi|253796264|gb|ACT35736.1| SKP1-like 2 [Petunia x
           hybrida]
          Length = 155

 Score =  230 bits (586), Expect = 4e-58
 Identities = 119/156 (76%), Positives = 133/156 (85%)
 Frame = -2

Query: 811 SESKMIMLKSSDNETFXXXXXXXXESQTIKHMIEDDCANTTIPLPNVSSKILAKVIEYCK 632
           S SKMI+LKSSD ETF        ESQTIKHMIEDDCA+T+IPLPNV+SKILAKVIEYCK
Sbjct: 2   STSKMIVLKSSDGETFQVEESVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCK 61

Query: 631 KHVESPKTDEVNKSVDDELKTFDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 452
           +HVE+ K+++  K+ +DELK+FD++FVKVDQ TLFDLILAANYLNIKSLLDLTCQTVADM
Sbjct: 62  RHVEANKSED--KASEDELKSFDSDFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 451 IKGKTPEEIRKTFNIKNDFTPXXXXXXXXENAWAFE 344
           IKGKTPEEIRKTFNIKNDFTP        ENAWAFE
Sbjct: 120 IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155


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