BLASTX nr result

ID: Cnidium21_contig00004536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004536
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06499.1| predicted protein [Hordeum vulgare subsp. vulgare]    152   1e-34
ref|XP_002955831.1| hypothetical protein VOLCADRAFT_121468 [Volv...   152   1e-34
gb|ADP02201.1| zinc finger CCCH domain-containing protein [Triti...   152   2e-34
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   149   8e-34
ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containin...   149   8e-34

>dbj|BAK06499.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 770

 Score =  152 bits (385), Expect = 1e-34
 Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 7/242 (2%)
 Frame = -1

Query: 953 RKFCPVHDFV-----SVYETDEFRMYKFKVVLCQKRFSHDWTACPFTHHGERARRRDPRT 789
           +K  PV  F+     S+Y +DEFRMY FK+  C + +SHDWT CPF H GE ARRRDPR 
Sbjct: 254 KKEYPVDPFLPDIKNSIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRK 313

Query: 788 Y--LPVLCPFFKDNEICRRGQACKFSHGTFEYFCHPGKYRTALCENGPGCSRRVCFFAHS 615
           Y    V CP F+   +CRRG  C+++HG FE + HP +YRT LC++G GC+RRVCFFAH+
Sbjct: 314 YHYSCVPCPDFRKG-VCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCNRRVCFFAHT 372

Query: 614 EDEQREEMTLTTEEIHAAFSFDAHMPVAIAPRQVLRALAARTKLINNSSTDAARTKNNVD 435
            DE R     T   +          P   A       +AA   L+  S +  +   +   
Sbjct: 373 TDELRPLYVSTGSAV----------PSPRASATAAMEMAAAMGLMPGSPSSVSAVMSPFT 422

Query: 434 APTTPEGKGNVTDASFVADRSTFLSLDNSPASLWSAALNAWPHDFNGLVDLLKEIKDVDS 255
            P +P G G      +       L L  S  SL S+ L +  +  +  +D    + D+DS
Sbjct: 423 PPRSPSGNGMPPSLGWQQPNVPTLHLPGS--SLQSSRLRSSLNARDMPIDDYSLLHDIDS 480

Query: 254 CL 249
            L
Sbjct: 481 QL 482


>ref|XP_002955831.1| hypothetical protein VOLCADRAFT_121468 [Volvox carteri f.
           nagariensis] gi|300258799|gb|EFJ43032.1| hypothetical
           protein VOLCADRAFT_121468 [Volvox carteri f.
           nagariensis]
          Length = 681

 Score =  152 bits (385), Expect = 1e-34
 Identities = 85/173 (49%), Positives = 110/173 (63%), Gaps = 10/173 (5%)
 Frame = -1

Query: 920 VYETDEFRMYKFKVVLCQKRFSHDWTACPFTHHGERARRRDPR--TYLPVLCPFFKDNEI 747
           +Y+TDEFRMY FKV+ C KR+ HDWT CPF H GE+A+RRDPR  TY  V CP   D + 
Sbjct: 33  LYKTDEFRMYCFKVLPCSKRYVHDWTVCPFAHPGEKAKRRDPRVFTYTGVACP---DMKK 89

Query: 746 CRRGQACKFSHGTFEYFCHPGKYRTALCENGPGCSRRVCFFAHSEDEQR-EEMTLTTEEI 570
           C+RG AC ++H  FEY+ HP +YRT LC +G GC R+VCFFAH+ DE R   + L   EI
Sbjct: 90  CQRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVCFFAHTLDELRVSSVKLLPSEI 149

Query: 569 HA---AFSFDAHMPVAIAPRQVLRALAAR--TKLINNSSTDAARTKNN--VDA 432
            A   A +FD      + P +V R+ + R  +K  N+SS+ A+   N   VDA
Sbjct: 150 AAGADASAFD------LDPFRVSRSDSGRSSSKSANSSSSSASAAGNEALVDA 196


>gb|ADP02201.1| zinc finger CCCH domain-containing protein [Triticum aestivum]
          Length = 750

 Score =  152 bits (383), Expect = 2e-34
 Identities = 87/227 (38%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
 Frame = -1

Query: 923 SVYETDEFRMYKFKVVLCQKRFSHDWTACPFTHHGERARRRDPRTY--LPVLCPFFKDNE 750
           S+Y +DEFRMY FK+  C + +SHDWT CPF H GE ARRRDPR Y    V CP F+   
Sbjct: 251 SIYASDEFRMYSFKIRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKG- 309

Query: 749 ICRRGQACKFSHGTFEYFCHPGKYRTALCENGPGCSRRVCFFAHSEDEQREEMTLTTEEI 570
           +CRRG  C+++HG FE + HP +YRT LC++G GC+RRVCFFAH+ DE R     T   +
Sbjct: 310 VCRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCNRRVCFFAHTTDELRPLYVSTGSAV 369

Query: 569 HAAFSFDAHMPVAIAPRQVLRALAARTKLINNSSTDAARTKNNVDAPTTPEGKGNVTDAS 390
                     P   A       +AA   L+  S +  +   +    P +P G G      
Sbjct: 370 ----------PSPRASATAAMEMAAAMGLMPGSPSSVSAVMSPFTPPRSPSGNGMPPSLG 419

Query: 389 FVADRSTFLSLDNSPASLWSAALNAWPHDFNGLVDLLKEIKDVDSCL 249
           +       L L  S  SL S+ L +  +  +  +D    ++D+DS L
Sbjct: 420 WQQPNVPTLHLPGS--SLQSSRLRSSLNARDMPMDDYSLLQDIDSQL 464


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score =  149 bits (377), Expect = 8e-34
 Identities = 87/221 (39%), Positives = 121/221 (54%), Gaps = 8/221 (3%)
 Frame = -1

Query: 923 SVYETDEFRMYKFKVVLCQKRFSHDWTACPFTHHGERARRRDPRT--YLPVLCPFFKDNE 750
           S+Y TDEFRM+ FKV  C + +SHDWT CPF H GE ARRRDPR   Y  V CP F+   
Sbjct: 260 SIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKG- 318

Query: 749 ICRRGQACKFSHGTFEYFCHPGKYRTALCENGPGCSRRVCFFAHSEDEQREEMTLTTEEI 570
            CRRG  C+++HG FE + HP +YRT LC++G  C+RRVCFFAH+ +E R     T   +
Sbjct: 319 ACRRGDLCEYAHGVFECWLHPAQYRTRLCKDGTNCARRVCFFAHTSEELRPLYLSTGSAV 378

Query: 569 HAAFSFDAHMPVAIAPRQVLRALAARTKLINNSSTDAARTKNNVDAPTTPEGKG-NVTDA 393
            +        P A  P   +   AA + L  + S+ +  + +    P +P   G + +  
Sbjct: 379 PS--------PRASGPANAMDMAAALSLLPGSPSSVSVMSPSPFAQPMSPSANGISHSSG 430

Query: 392 SFVADRSTFLSL--DNSPASLWSAALNAW---PHDFNGLVD 285
           ++       L+L   N  +S   ++LNA    P DFN L+D
Sbjct: 431 AWPQPNVPTLNLPGSNFQSSRLRSSLNARDIPPEDFNMLLD 471


>ref|XP_003540529.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Glycine max]
          Length = 704

 Score =  149 bits (377), Expect = 8e-34
 Identities = 93/246 (37%), Positives = 132/246 (53%), Gaps = 12/246 (4%)
 Frame = -1

Query: 983 TMTQVSSLYRRKFCPVHDFV-----SVYETDEFRMYKFKVVLCQKRFSHDWTACPFTHHG 819
           T   V SL  +K  P+   +     S+Y TDEFRM+ FKV  C + +SHDWT CPF H G
Sbjct: 203 TDAAVCSLSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPG 262

Query: 818 ERARRRDPRT--YLPVLCPFFKDNEICRRGQACKFSHGTFEYFCHPGKYRTALCENGPGC 645
           E ARRRDPR   Y  V CP F+    CRRG  C+++HG FE + HP +YRT LC++G  C
Sbjct: 263 ENARRRDPRKFHYSCVPCPDFRKG-ACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSC 321

Query: 644 SRRVCFFAHSEDEQREEMTLTTEEIHAAFSFDAHMPVAIAPRQVLRALAARTKLINNSST 465
           +RRVCFFAH+ +E R     T   + +  S       A AP  V+   AA + L  + S+
Sbjct: 322 NRRVCFFAHTAEELRPLYVSTGSAVPSPRS------SASAP-NVMDMAAAMSLLPGSPSS 374

Query: 464 DAARTKNNVDAPTTPEGKGNVTDASFVADRSTFLSL--DNSPASLWSAALNAW---PHDF 300
            ++ + ++   P +P   G    +++     + L L   N  +S   ++L+A    P D 
Sbjct: 375 VSSMSPSHFGQPMSPSANGMSLSSAWAQPNVSALHLPGSNLQSSRLRSSLSARDMPPDDL 434

Query: 299 NGLVDL 282
           N + DL
Sbjct: 435 NMMSDL 440


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