BLASTX nr result
ID: Cnidium21_contig00004510
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00004510
(344 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 154 1e-35
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 154 1e-35
ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-35
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin... 151 6e-35
ref|XP_002321667.1| predicted protein [Populus trichocarpa] gi|2... 147 1e-33
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 154 bits (388), Expect = 1e-35
Identities = 71/117 (60%), Positives = 88/117 (75%), Gaps = 5/117 (4%)
Frame = +1
Query: 7 PPAFALRPMNIPASDANFYAY--PQQQLIVNEFPERPGQPECSIYLKTGDCKYRATCKFH 180
PPAF + N A+DAN Y + QQQ ++ +FPERPGQPECS +LKTGDCK+RA CK+H
Sbjct: 330 PPAFVI---NNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYH 386
Query: 181 HPKTR---KTTITLSDRGLPLRPDQGICSGYSRYGICKYGPSCKYDHSVSNGTSAES 342
HPK R TLSD+GLPLRPDQ IC+ Y+RYGICK+GP+CK+DH V+ G SA +
Sbjct: 387 HPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNYGNSASA 443
Score = 80.9 bits (198), Expect = 1e-13
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTI---TLSDRGLPLRPDQGICSGY 264
EFPERPGQ EC YL+TG CK+ C+++H K + + + L+ GLP+R + C Y
Sbjct: 174 EFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYY 233
Query: 265 SRYGICKYGPSCKYDH 312
R G CKYG +C+++H
Sbjct: 234 MRTGSCKYGANCRFNH 249
Score = 72.4 bits (176), Expect = 4e-11
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTIT------LSDRGLPLRPDQGIC 255
++P RP +CS YL+TG CK+ + CKF+HP RK + P RP Q C
Sbjct: 125 QYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTEC 184
Query: 256 SGYSRYGICKYGPSCKYDHS 315
Y R G CK+G +C+Y+H+
Sbjct: 185 KYYLRTGGCKFGKACRYNHT 204
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 154 bits (388), Expect = 1e-35
Identities = 71/117 (60%), Positives = 88/117 (75%), Gaps = 5/117 (4%)
Frame = +1
Query: 7 PPAFALRPMNIPASDANFYAY--PQQQLIVNEFPERPGQPECSIYLKTGDCKYRATCKFH 180
PPAF + N A+DAN Y + QQQ ++ +FPERPGQPECS +LKTGDCK+RA CK+H
Sbjct: 333 PPAFVI---NNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYH 389
Query: 181 HPKTR---KTTITLSDRGLPLRPDQGICSGYSRYGICKYGPSCKYDHSVSNGTSAES 342
HPK R TLSD+GLPLRPDQ IC+ Y+RYGICK+GP+CK+DH V+ G SA +
Sbjct: 390 HPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNYGNSASA 446
Score = 80.9 bits (198), Expect = 1e-13
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTI---TLSDRGLPLRPDQGICSGY 264
EFPERPGQ EC YL+TG CK+ C+++H K + + + L+ GLP+R + C Y
Sbjct: 174 EFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYY 233
Query: 265 SRYGICKYGPSCKYDH 312
R G CKYG +C+++H
Sbjct: 234 MRTGSCKYGANCRFNH 249
Score = 72.4 bits (176), Expect = 4e-11
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTIT------LSDRGLPLRPDQGIC 255
++P RP +CS YL+TG CK+ + CKF+HP RK + P RP Q C
Sbjct: 125 QYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTEC 184
Query: 256 SGYSRYGICKYGPSCKYDHS 315
Y R G CK+G +C+Y+H+
Sbjct: 185 KYYLRTGGCKFGKACRYNHT 204
>ref|XP_002318105.1| predicted protein [Populus trichocarpa] gi|222858778|gb|EEE96325.1|
predicted protein [Populus trichocarpa]
Length = 477
Score = 153 bits (386), Expect = 2e-35
Identities = 71/121 (58%), Positives = 91/121 (75%), Gaps = 9/121 (7%)
Frame = +1
Query: 7 PPAFALRP------MNIPASDANFYAYPQQQLIVNEFPERPGQPECSIYLKTGDCKYRAT 168
PP +L P +NI A+++N YA QQQ++V+EFPERPGQP+CS Y+K GDCK+++
Sbjct: 327 PPERSLHPPLSYALINI-ATESNVYAPQQQQIVVDEFPERPGQPQCSFYMKFGDCKFKSN 385
Query: 169 CKFHHPKTR---KTTITLSDRGLPLRPDQGICSGYSRYGICKYGPSCKYDHSVSNGTSAE 339
CK+HHPK R +TLSD+GLPLRPDQ ICS YSRYGICK+GPSCK+DHS+ +S
Sbjct: 386 CKYHHPKNRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKFDHSIQPASSIG 445
Query: 340 S 342
S
Sbjct: 446 S 446
Score = 68.2 bits (165), Expect = 7e-10
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Frame = +1
Query: 91 NEFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTITLSDRGLPLRPDQGI------ 252
+++P RP +C+ Y+KTG CK+ A CKF+HP RK + L+ + ++
Sbjct: 121 HQYPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRKNQVQLTVKEKTKEREEATEKPSLI 180
Query: 253 -CSGYSRYGICKYGPSCKYDHS 315
C Y + G CKYG +C+++HS
Sbjct: 181 ECKYYLKTGGCKYGTACRFNHS 202
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTR----------KTTITLSDRGLPLRPD 243
E E+P EC YLKTG CKY C+F+H + + + L+ GLP+R
Sbjct: 172 EATEKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLG 231
Query: 244 QGICSGYSRYGICKYGPSCKYDH 312
+ C + R G CK+G +CKY+H
Sbjct: 232 EKECEYFMRNGSCKFGANCKYNH 254
>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 151 bits (381), Expect = 6e-35
Identities = 64/100 (64%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Frame = +1
Query: 31 MNIPASDANFYAYPQQQLIVNEFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTI- 207
MN PA D N Y + Q+Q+ V+EFPERPG+PECS +LKTGDCK+++ CKFHHPK R T +
Sbjct: 351 MNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLP 410
Query: 208 --TLSDRGLPLRPDQGICSGYSRYGICKYGPSCKYDHSVS 321
LSD+GLPLRPDQ +CS YSRYGICK+GP+CK+DH ++
Sbjct: 411 PCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPIN 450
Score = 68.6 bits (166), Expect = 5e-10
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTT-----ITLSDRGLPLRPDQGICS 258
E ER G EC Y ++G CK+ +CK++H + + +T + L+ GLP+RP + C
Sbjct: 186 ETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPGERECP 245
Query: 259 GYSRYGICKYGPSCKYDH 312
Y R G CK+G +CK++H
Sbjct: 246 YYMRTGSCKFGANCKFNH 263
Score = 67.4 bits (163), Expect = 1e-09
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 91 NEFPERPGQPECSIYLKTGDCKYRATCKFHHPKTRKTTITLSDRG----LPLRPDQGICS 258
+ +P RP +C+ Y+KTG+CK+ CKF+HP RK+ G R C
Sbjct: 138 HHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETTERSGMTECK 197
Query: 259 GYSRYGICKYGPSCKYDHS 315
Y R G CK+G SCKY+H+
Sbjct: 198 YYQRSGGCKFGKSCKYNHT 216
>ref|XP_002321667.1| predicted protein [Populus trichocarpa] gi|222868663|gb|EEF05794.1|
predicted protein [Populus trichocarpa]
Length = 341
Score = 147 bits (370), Expect = 1e-33
Identities = 66/112 (58%), Positives = 88/112 (78%), Gaps = 3/112 (2%)
Frame = +1
Query: 7 PPAFALRPMNIPASDANFYAYPQQQLIVNEFPERPGQPECSIYLKTGDCKYRATCKFHHP 186
PP++A M+ PA+++N YA QQQ +V+EFPERPGQ CS ++K GDCK+++ CK+HHP
Sbjct: 197 PPSYA---MSNPATESNVYAPQQQQTVVDEFPERPGQQLCSYFMKFGDCKFKSNCKYHHP 253
Query: 187 KTR---KTTITLSDRGLPLRPDQGICSGYSRYGICKYGPSCKYDHSVSNGTS 333
K R ++TLSD+GLPLRPDQ ICS YSRYGICK+GP+CK+DHS+ +S
Sbjct: 254 KNRIPKSPSLTLSDKGLPLRPDQIICSYYSRYGICKFGPACKFDHSIQPPSS 305
Score = 77.4 bits (189), Expect = 1e-12
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Frame = +1
Query: 94 EFPERPGQPECSIYLKTGDCKYRATCKFHHPKTR-----------KTTITLSDRGLPLRP 240
E E+PGQ EC YL+TG CKY C+F+H + + + + L+ GLP+RP
Sbjct: 34 EATEKPGQTECKYYLRTGGCKYGKACRFNHTREKTFSVPPLKTPMPSILELNFLGLPIRP 93
Query: 241 DQGICSGYSRYGICKYGPSCKYDH 312
+ C Y R G CKYG +CKY+H
Sbjct: 94 GEKQCEFYMRNGSCKYGATCKYNH 117