BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004505
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japo...   126   2e-27
gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indi...   126   2e-27
ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group] g...   126   2e-27
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...   124   6e-27

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score =  170 bits (430), Expect = 1e-40
 Identities = 87/135 (64%), Positives = 101/135 (74%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           GLEF+A VRTELMIMYVKFGEL  AE LF SMV++DLVAWNALI+   Q G++  AL+ F
Sbjct: 165 GLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSF 224

Query: 225 HEMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVK 46
            EM + GI PD VTIVSALSAC  LGCLET  EIY+F R EG +  N++V NARLD+  K
Sbjct: 225 REMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEG-IDSNIIVHNARLDMCAK 283

Query: 45  CGCMDMAFELFNRMP 1
           CG MD A  LF+ MP
Sbjct: 284 CGDMDKAMNLFDEMP 298



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/97 (32%), Positives = 55/97 (56%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           G++   +V    + M  K G++D A  LF  M  +++++W+ +I  YA NG +  AL LF
Sbjct: 266 GIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALF 325

Query: 225 HEMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDF 115
             M+  G+ P+ VT ++ LSACS  G +    + ++F
Sbjct: 326 SRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNF 362


>gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
          Length = 746

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/134 (44%), Positives = 89/134 (66%)
 Frame = -2

Query: 402 LEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFH 223
           +E  ++V + L+ MY K GE+  A ++F +++DKD+VAWNA+I+ YAQNG +  A+ LFH
Sbjct: 285 MEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFH 344

Query: 222 EMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKC 43
            MR+ G+ PD +T+   LSACS +G LE   E+  +  R G +  NV V  A +D+Y KC
Sbjct: 345 SMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG-LYSNVYVGTALVDMYAKC 403

Query: 42  GCMDMAFELFNRMP 1
           G +D A E+F +MP
Sbjct: 404 GDLDKAIEVFRKMP 417



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           GL     V T L+ MY K G+LD A ++F  M  K++ +WNALI   A NG    A++ F
Sbjct: 385 GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHF 444

Query: 225 HEMR-VGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYV 49
             MR   G+ PD +T +  LSAC   G ++     ++    E  +   +   +  +D+  
Sbjct: 445 QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLA 504

Query: 48  KCGCMDMAFELFNRMP 1
           + G ++ A++   ++P
Sbjct: 505 RSGHLEEAWDFIEKIP 520



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -2

Query: 372 LMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFHEM-RVGGISP 196
           L+ MY    +  +A K+F  +  +D+V+WNA++ AY + G      R+F +M + G ++P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252

Query: 195 DGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKCGCMDMAFEL 16
           + VT+   L+AC   G L     + ++      +  + +V +A L +Y KCG +  A  +
Sbjct: 253 NVVTVAVVLAACRDQGDLVLGRWVEEWS-WSARMEMDSLVGSALLGMYEKCGEIAEARRV 311

Query: 15  FN 10
           F+
Sbjct: 312 FD 313


>gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
          Length = 746

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/134 (44%), Positives = 89/134 (66%)
 Frame = -2

Query: 402 LEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFH 223
           +E  ++V + L+ MY K GE+  A ++F +++DKD+VAWNA+I+ YAQNG +  A+ LFH
Sbjct: 285 MEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFH 344

Query: 222 EMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKC 43
            MR+ G+ PD +T+   LSACS +G LE   E+  +  R G +  NV V  A +D+Y KC
Sbjct: 345 SMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG-LYSNVYVGTALVDMYAKC 403

Query: 42  GCMDMAFELFNRMP 1
           G +D A E+F +MP
Sbjct: 404 GDLDKAIEVFRKMP 417



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           GL     V T L+ MY K G+LD A ++F  M  K++ +WNALI   A NG    A++ F
Sbjct: 385 GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHF 444

Query: 225 HEMR-VGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYV 49
             MR   G+ PD +T +  LSAC   G ++     ++    E  +   +   +  +D+  
Sbjct: 445 QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLA 504

Query: 48  KCGCMDMAFELFNRMP 1
           + G ++ A++   ++P
Sbjct: 505 RSGHLEEAWDFIEKIP 520



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -2

Query: 372 LMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFHEM-RVGGISP 196
           L+ MY    +  +A K+F  +  +D+V+WNA++ AY + G      R+F +M + G ++P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252

Query: 195 DGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKCGCMDMAFEL 16
           + VT+   L+AC   G L     + ++      +  + +V +A L +Y KCG +  A  +
Sbjct: 253 NAVTVAVVLAACRDQGDLVLGRWVEEWS-WSARMEMDSLVGSALLGMYEKCGEIAEARRV 311

Query: 15  FN 10
           F+
Sbjct: 312 FD 313


>ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
           gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa
           Japonica Group]
          Length = 767

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/134 (44%), Positives = 89/134 (66%)
 Frame = -2

Query: 402 LEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFH 223
           +E  ++V + L+ MY K GE+  A ++F +++DKD+VAWNA+I+ YAQNG +  A+ LFH
Sbjct: 285 MEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFH 344

Query: 222 EMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKC 43
            MR+ G+ PD +T+   LSACS +G LE   E+  +  R G +  NV V  A +D+Y KC
Sbjct: 345 SMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRG-LYSNVYVGTALVDMYAKC 403

Query: 42  GCMDMAFELFNRMP 1
           G +D A E+F +MP
Sbjct: 404 GDLDKAIEVFRKMP 417



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           GL     V T L+ MY K G+LD A ++F  M  K++ +WNALI   A NG    A++ F
Sbjct: 385 GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHF 444

Query: 225 HEMR-VGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYV 49
             MR   G+ PD +T +  LSAC   G ++     ++    E  +   +   +  +D+  
Sbjct: 445 QLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLA 504

Query: 48  KCGCMDMAFELFNRMP 1
           + G ++ A++   ++P
Sbjct: 505 RSGHLEEAWDFIEKIP 520



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
 Frame = -2

Query: 372 LMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFHEM-RVGGISP 196
           L+ MY    +  +A K+F  +  +D+V+WNA++ AY + G      R+F +M + G ++P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252

Query: 195 DGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVKCGCMDMAFEL 16
           + VT+   L+AC   G L     + ++      +  + +V +A L +Y KCG +  A  +
Sbjct: 253 NVVTVAVVLAACRDQGDLVLGRWVEEWS-WSARMEMDSLVGSALLGMYEKCGEIAEARRV 311

Query: 15  FN 10
           F+
Sbjct: 312 FD 313


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/134 (50%), Positives = 89/134 (66%)
 Frame = -2

Query: 405 GLEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLF 226
           G E + +V TEL++MY+KFGEL SAE LF SM  KDLVAWNA I+   Q G +  AL  F
Sbjct: 139 GFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYF 198

Query: 225 HEMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDNARLDVYVK 46
           ++M    +  D  T+VS LSAC QLG L+   EIYD  R+E  +  N++V+NARLD+++K
Sbjct: 199 NKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKE-EIECNIIVENARLDMHLK 257

Query: 45  CGCMDMAFELFNRM 4
           CG  + A  LF+ M
Sbjct: 258 CGSTEAARVLFDDM 271



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
 Frame = -2

Query: 402 LEFIAMVRTELMIMYVKFGELDSAEKLFCSMVDKDLVAWNALISAYAQNGYAVNALRLFH 223
           +E   +V    + M++K G  ++A  LF  M  +++V+W+ +I  YA NG +  AL LF 
Sbjct: 241 IECNIIVENARLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFT 300

Query: 222 EMRVGGISPDGVTIVSALSACSQLGCLETAMEIYDFGRREGTVRGNVMVDN--ARLDVYV 49
            M+  G+ P+ VT +  LSACS  G +      +    R          ++    +D+  
Sbjct: 301 MMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLG 360

Query: 48  KCGCMDMAFELFNRM 4
           + G ++ A+E   +M
Sbjct: 361 RSGLLEEAYEFIKKM 375