BLASTX nr result

ID: Cnidium21_contig00004504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004504
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516262.1| copper transporter, putative [Ricinus commun...   160   1e-37
ref|XP_004144217.1| PREDICTED: copper transporter 5-like [Cucumi...   158   5e-37
ref|XP_002326289.1| copper transporter [Populus trichocarpa] gi|...   158   5e-37
ref|XP_003603232.1| Copper transporter [Medicago truncatula] gi|...   156   2e-36
ref|XP_003588901.1| Copper transporter [Medicago truncatula] gi|...   154   1e-35

>ref|XP_002516262.1| copper transporter, putative [Ricinus communis]
           gi|223544748|gb|EEF46264.1| copper transporter, putative
           [Ricinus communis]
          Length = 144

 Score =  160 bits (406), Expect = 1e-37
 Identities = 85/146 (58%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
 Frame = -3

Query: 540 MMHMTFYWGINVTILFDSWKTNSITSYALSLLACFLISVFYQYMEDRRIKLKLI----AS 373
           MMHMT YWGI VT+LFDSWKT+S  SY LSLLACFL S FYQYMEDRRIK K +    A+
Sbjct: 1   MMHMTLYWGIKVTLLFDSWKTDSWPSYLLSLLACFLFSSFYQYMEDRRIKFKSLAAASAA 60

Query: 372 SPPPSGLNVPLISEXXXXXXXXXXXXXXAMFGVNSAVGYMLMLAIMSFNGGVFVAIVLGL 193
           +  PS + VPL+                 +FG NSA+GY+LMLAIMSFNGGVF+A V GL
Sbjct: 61  TSQPSSVTVPLLRSSKLGRFSSAKFAAAILFGFNSAIGYLLMLAIMSFNGGVFLATVAGL 120

Query: 192 AVGYLVFRSGGXXXXXXXXDNPCACA 115
           +VGYLVFRS          ++PCACA
Sbjct: 121 SVGYLVFRS--EDEQVVVIEDPCACA 144


>ref|XP_004144217.1| PREDICTED: copper transporter 5-like [Cucumis sativus]
           gi|449489282|ref|XP_004158267.1| PREDICTED: copper
           transporter 5-like isoform 1 [Cucumis sativus]
           gi|449489286|ref|XP_004158268.1| PREDICTED: copper
           transporter 5-like isoform 2 [Cucumis sativus]
          Length = 142

 Score =  158 bits (400), Expect = 5e-37
 Identities = 80/143 (55%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
 Frame = -3

Query: 540 MMHMTFYWGINVTILFDSWKTNSITSYALSLLACFLISVFYQYMEDRRIKLKLI-ASSPP 364
           MMHMTFYW   VT+L +SW+T S  SY+LSLLACF++S+FYQY+E+ RI+LKL+    P 
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 363 PSGLNVPLISEXXXXXXXXXXXXXXAMFGVNSAVGYMLMLAIMSFNGGVFVAIVLGLAVG 184
           PS +  PL+                  FGVNSA+GY+LMLAIMSFNGGVF+AIV GLA+G
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 183 YLVFRSGGXXXXXXXXDNPCACA 115
           YLVFRS          +NPCACA
Sbjct: 121 YLVFRS-DDEDVIVSAENPCACA 142


>ref|XP_002326289.1| copper transporter [Populus trichocarpa]
           gi|222833482|gb|EEE71959.1| copper transporter [Populus
           trichocarpa]
          Length = 141

 Score =  158 bits (400), Expect = 5e-37
 Identities = 85/145 (58%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
 Frame = -3

Query: 540 MMHMTFYWGINVTILFDSWKTNSITSYALSLLACFLISVFYQYMEDRRIKLKLIASSPP- 364
           MMHMT YWGI VT+LFD WKT+S  SY LSLLACFL S FYQY+EDRRI+ K IA S P 
Sbjct: 1   MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPS 60

Query: 363 --PSGLNVPLISEXXXXXXXXXXXXXXAMFGVNSAVGYMLMLAIMSFNGGVFVAIVLGLA 190
             P  +N PL++                +FG+N+A+GY+LMLAIMSFNGGVF+AIVLGL 
Sbjct: 61  QQPPPVNAPLLT--PKRRASSAKFATALLFGINAAIGYLLMLAIMSFNGGVFLAIVLGLT 118

Query: 189 VGYLVFRSGGXXXXXXXXDNPCACA 115
           VGY++FRSG         DN CACA
Sbjct: 119 VGYVLFRSG--DEEVVVVDNTCACA 141


>ref|XP_003603232.1| Copper transporter [Medicago truncatula]
           gi|355492280|gb|AES73483.1| Copper transporter [Medicago
           truncatula] gi|388514357|gb|AFK45240.1| unknown
           [Medicago truncatula]
          Length = 143

 Score =  156 bits (395), Expect = 2e-36
 Identities = 80/145 (55%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
 Frame = -3

Query: 540 MMHMTFYWGINVTILFDSWKTNSITSYALSLLACFLISVFYQYMEDRRIKLKLIASSPP- 364
           MMHMTFYW   VT+LFDSWKT+S TSYALSLLAC ++S+FYQ++E+RRI+LKL+AS  P 
Sbjct: 1   MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPF 60

Query: 363 PSGLNVPLISE--XXXXXXXXXXXXXXAMFGVNSAVGYMLMLAIMSFNGGVFVAIVLGLA 190
           P+ +  PL+                   +FG++SA+GY LML++MS+NGGVF+AIV+GLA
Sbjct: 61  PAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLA 120

Query: 189 VGYLVFRSGGXXXXXXXXDNPCACA 115
           VGYL+FRS G        D+ CACA
Sbjct: 121 VGYLLFRSDG--EDSVVVDSSCACA 143


>ref|XP_003588901.1| Copper transporter [Medicago truncatula]
           gi|355477949|gb|AES59152.1| Copper transporter [Medicago
           truncatula]
          Length = 142

 Score =  154 bits (389), Expect = 1e-35
 Identities = 80/145 (55%), Positives = 97/145 (66%), Gaps = 3/145 (2%)
 Frame = -3

Query: 540 MMHMTFYWGINVTILFDSWKTNSITSYALSLLACFLISVFYQYMEDRRIKLKLIAS---S 370
           MMHMT YWG NVT+LFDSWKTNS TSY LSL+ACF+I+ FYQY+E+ RI+LK  +    +
Sbjct: 1   MMHMTLYWGKNVTLLFDSWKTNSWTSYLLSLIACFIIATFYQYLENLRIRLKFFSGEGRT 60

Query: 369 PPPSGLNVPLISEXXXXXXXXXXXXXXAMFGVNSAVGYMLMLAIMSFNGGVFVAIVLGLA 190
            P   +  PL+                 +FGVNSA+GY+LMLAIMSFNGGVF+AIV+GL 
Sbjct: 61  TPVPEIRTPLLG---LNKVSRNKVVESVLFGVNSAIGYLLMLAIMSFNGGVFLAIVVGLT 117

Query: 189 VGYLVFRSGGXXXXXXXXDNPCACA 115
            GY +FRS G        DN CACA
Sbjct: 118 FGYFLFRSQGDEEAAVVVDNSCACA 142


Top