BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004495
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   349   6e-94
ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   332   5e-89
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   329   6e-88
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   313   3e-83
ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis ...   309   6e-82

>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis vinifera]
            gi|296081305|emb|CBI17749.3| unnamed protein product
            [Vitis vinifera]
          Length = 553

 Score =  349 bits (895), Expect = 6e-94
 Identities = 193/301 (64%), Positives = 222/301 (73%), Gaps = 8/301 (2%)
 Frame = -1

Query: 887  KFHTLAQQDHGELSSKHESFNGISHEVS-----QKHC--ASDGPTKTVEDLQPRGLINSG 729
            +F +L      E  SK    NG   + S     +K    A +GP   V++L PRGLINSG
Sbjct: 146  QFQSLESHVVEEECSKERDLNGTIDDSSTFVPLKKEILKAPNGPAPAVKNLLPRGLINSG 205

Query: 728  NLCFLSATLQAXXXXXXXXXXXXXLRSRSFSKVGYPTLAAFLDFVSVLELPNGITLKRKD 549
            NLCFL+ATLQA             LR R   KVGYPTL AF +FVS  ++P  ++LK+KD
Sbjct: 206  NLCFLNATLQALLSCTPFIQLLQELRIRDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKD 265

Query: 548  IPVLESGRPFSPTMFEGVLKKFTPDVSNSISGRPRQEDAQEFLSFVMDQMHEELLKLEGQ 369
            +  +E+GRPFSP MFEGVLK FTPDV N ISGRPRQEDAQEFLSFVMDQMH+ELLKLEG 
Sbjct: 266  LNGVETGRPFSPAMFEGVLKNFTPDVPNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGF 325

Query: 368  SSG-NVGKSSLVSSADDDEWETVGPKNKSAVTRTQNFVPSYLSEIFGGQLRSEVKARGIK 192
             S  N GKSSLVSSA+DDEWETVGPKNKSAVTRTQ+FVPS LS+IFGGQLRS VKARG K
Sbjct: 326  FSNLNGGKSSLVSSAEDDEWETVGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNK 385

Query: 191  PSATVQPFMLLHLDISHDVVRTIEDALRLFSAAETIDEYRTSTTKKAGVVSAKKSISIQK 12
             SATVQPF+LLHLDI  + + TIEDALRLFSA ET++ YRTS T KAG+V+A KS+ IQK
Sbjct: 386  ASATVQPFLLLHLDILPEAIYTIEDALRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQK 445

Query: 11   L 9
            L
Sbjct: 446  L 446


>ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 530

 Score =  332 bits (852), Expect = 5e-89
 Identities = 173/256 (67%), Positives = 202/256 (78%), Gaps = 1/256 (0%)
 Frame = -1

Query: 767 VEDLQPRGLINSGNLCFLSATLQAXXXXXXXXXXXXXLRSRSFSKVGYPTLAAFLDFVSV 588
           V+D+ PRGLINSGNLCFL+AT+QA             LR+ +  KVGYPTL AF +F++ 
Sbjct: 171 VKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTCNLPKVGYPTLTAFAEFITQ 230

Query: 587 LELPNGITLKRKDIPVLESGRPFSPTMFEGVLKKFTPDVSNSISGRPRQEDAQEFLSFVM 408
            ++P+   LK++D    ESGRPF P MFEGVLK FTPDV NSISGRPRQEDAQEFLSFVM
Sbjct: 231 FDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDVPNSISGRPRQEDAQEFLSFVM 290

Query: 407 DQMHEELLKLEGQSSG-NVGKSSLVSSADDDEWETVGPKNKSAVTRTQNFVPSYLSEIFG 231
           DQMH+ELLKLEGQSS  N  KSSLVSS +DDEWETVGPKNKSAVTRTQ+F+PS LS IFG
Sbjct: 291 DQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRTQSFLPSELSGIFG 350

Query: 230 GQLRSEVKARGIKPSATVQPFMLLHLDISHDVVRTIEDALRLFSAAETIDEYRTSTTKKA 51
           GQLRS V+A+G + SATVQP++LLHLDI  D V TIEDAL LFSA ET++ YRTS T KA
Sbjct: 351 GQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLTAKA 410

Query: 50  GVVSAKKSISIQKLPR 3
           GVV+A+KS+ I  LP+
Sbjct: 411 GVVTARKSVQIVTLPK 426


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score =  329 bits (843), Expect = 6e-88
 Identities = 171/256 (66%), Positives = 201/256 (78%), Gaps = 1/256 (0%)
 Frame = -1

Query: 767 VEDLQPRGLINSGNLCFLSATLQAXXXXXXXXXXXXXLRSRSFSKVGYPTLAAFLDFVSV 588
           V+D+ PRGLINSGNLCFL+AT+QA             LR+R+  KVGYPTL AF +F++ 
Sbjct: 173 VKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVGYPTLTAFAEFIAQ 232

Query: 587 LELPNGITLKRKDIPVLESGRPFSPTMFEGVLKKFTPDVSNSISGRPRQEDAQEFLSFVM 408
            ++P+   +K++D    ESGRPF P MFE VLK FTPDV NSISGRPRQEDAQEFLSFVM
Sbjct: 233 FDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRPRQEDAQEFLSFVM 292

Query: 407 DQMHEELLKLEGQSSG-NVGKSSLVSSADDDEWETVGPKNKSAVTRTQNFVPSYLSEIFG 231
           DQMH+ELLKLEG SS  N  KSSLVSS +DDEWETVGPKNKSAVTRTQ+F+PS LS IFG
Sbjct: 293 DQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRTQSFLPSDLSGIFG 352

Query: 230 GQLRSEVKARGIKPSATVQPFMLLHLDISHDVVRTIEDALRLFSAAETIDEYRTSTTKKA 51
           GQLRS V+A+G + SATVQP++LLHLDI  D V TIEDAL LFSA ET++ YRTS T KA
Sbjct: 353 GQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLTAKA 412

Query: 50  GVVSAKKSISIQKLPR 3
           GVV+A+KS+ I  LP+
Sbjct: 413 GVVTARKSVRIVTLPK 428


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 532

 Score =  313 bits (802), Expect = 3e-83
 Identities = 169/256 (66%), Positives = 196/256 (76%), Gaps = 1/256 (0%)
 Frame = -1

Query: 767 VEDLQPRGLINSGNLCFLSATLQAXXXXXXXXXXXXXLRSRSFSKVGYPTLAAFLDFVSV 588
           V+DLQPRGLINSGNLCFLSAT+QA             LR+R+  KVGYPTL AF +FV+ 
Sbjct: 176 VKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIPKVGYPTLKAFAEFVTQ 235

Query: 587 LELPNGITLKRKDIPVLESGRPFSPTMFEGVLKKFTPDVSNSISGRPRQEDAQEFLSFVM 408
            ++P+G+ LK+KD    E GR F P MFE VLK FTPDV NSISGRPRQEDAQEFLSFVM
Sbjct: 236 FDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSISGRPRQEDAQEFLSFVM 295

Query: 407 DQMHEELLKLEGQSSG-NVGKSSLVSSADDDEWETVGPKNKSAVTRTQNFVPSYLSEIFG 231
           DQMH+ELLKLEGQSS  N  KS LVSS +DDEWETVGPKNKSAVTRTQ+F+PS L+ IFG
Sbjct: 296 DQMHDELLKLEGQSSSLNGSKSFLVSSVEDDEWETVGPKNKSAVTRTQSFIPSELNGIFG 355

Query: 230 GQLRSEVKARGIKPSATVQPFMLLHLDISHDVVRTIEDALRLFSAAETIDEYRTSTTKKA 51
           GQL+S V  +G + SAT QP+ L+HLDI  D V TIEDAL LFSA ET++ YR S + KA
Sbjct: 356 GQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLFSAPETLEGYRASVSGKA 414

Query: 50  GVVSAKKSISIQKLPR 3
           G  +AKKSI I+ LP+
Sbjct: 415 G--TAKKSIKIKTLPK 428


>ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
            gi|297313159|gb|EFH43582.1| ubiquitin-specific protease
            24 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  309 bits (791), Expect = 6e-82
 Identities = 173/298 (58%), Positives = 210/298 (70%), Gaps = 3/298 (1%)
 Frame = -1

Query: 887  KFHTLAQQDHGELSSKHESFNGISHEVSQKHCASDGPTKTVEDLQPRGLINSGNLCFLSA 708
            KF  L  +D     S   S   I  + +QK      P   V+D  PRGLIN+GNLCFL+A
Sbjct: 156  KFQALDNEDF----SSDSSSGSIQRKKNQKVPTESVPP--VKDFTPRGLINAGNLCFLNA 209

Query: 707  TLQAXXXXXXXXXXXXXLRSRSFSKVGYPTLAAFLDFVSVLELPNGITLKRKDIPVLESG 528
            TLQA             ++ +   K   PTLAAF +F+S L++P+  ++ R ++ V+E+G
Sbjct: 210  TLQALLSCSPFVQLLQRIQLQDIPKADSPTLAAFSEFISELDVPSSSSI-RNNVTVVEAG 268

Query: 527  RPFSPTMFEGVLKKFTPDVSNSISGRPRQEDAQEFLSFVMDQMHEELLKLEGQSSG-NVG 351
            RPF P MFEGVL+ FTPDV N++SGRPRQEDAQEFLSF+MDQMH+ELLKL+ QS      
Sbjct: 269  RPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTAS 328

Query: 350  KSSLVSSA--DDDEWETVGPKNKSAVTRTQNFVPSYLSEIFGGQLRSEVKARGIKPSATV 177
            KSS++SSA  DDDEWETVGPKNKSAVTRTQ+FVPS LSEIFGGQL+S VKA+G K SATV
Sbjct: 329  KSSVISSANDDDDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATV 388

Query: 176  QPFMLLHLDISHDVVRTIEDALRLFSAAETIDEYRTSTTKKAGVVSAKKSISIQKLPR 3
            QP++LLHLDI  D V+ IEDAL LFSA E ++ YR S T K GVVSA KSI IQKL +
Sbjct: 389  QPYLLLHLDIHPDGVKGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSK 446