BLASTX nr result

ID: Cnidium21_contig00004473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004473
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus ...   274   2e-71
ref|XP_002298850.1| predicted protein [Populus trichocarpa] gi|2...   272   9e-71
ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Gl...   272   1e-70
ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine...   271   2e-70
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin...   271   2e-70

>ref|XP_002529032.1| 40S ribosomal protein S8, putative [Ricinus communis]
           gi|223531512|gb|EEF33343.1| 40S ribosomal protein S8,
           putative [Ricinus communis]
          Length = 219

 Score =  274 bits (701), Expect = 2e-71
 Identities = 144/204 (70%), Positives = 151/204 (74%)
 Frame = -2

Query: 981 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 802
           MGISRDSMH                KYELGRQPA+TKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 801 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 622
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 621 EIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVARKIQSRQEDRKIDPHIEEQFGGGRLLAA 442
           +IGR                       SNHV RK++ RQ+ RK+DPHIEEQFGGGRLLA 
Sbjct: 121 DIGRKKKTAAAKKEGEEGEAATEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGGGRLLAC 180

Query: 441 ISSRPGQCGRADGYILEGKELEFY 370
           ISSRPGQCGRADGYILEGKELEFY
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFY 204


>ref|XP_002298850.1| predicted protein [Populus trichocarpa] gi|222846108|gb|EEE83655.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  272 bits (696), Expect = 9e-71
 Identities = 143/204 (70%), Positives = 151/204 (74%)
 Frame = -2

Query: 981 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 802
           MGISRDSMH                KYELGRQPA+TKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 801 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 622
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGI 120

Query: 621 EIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVARKIQSRQEDRKIDPHIEEQFGGGRLLAA 442
           +IGR                       SNHV RK++ RQ+ RK+DPHIEEQFG GRLLA+
Sbjct: 121 DIGRKKKTTAAKKEGEEGEAVTEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGSGRLLAS 180

Query: 441 ISSRPGQCGRADGYILEGKELEFY 370
           ISSRPGQCGRADGYILEGKELEFY
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFY 204


>ref|XP_003520991.1| PREDICTED: 40S ribosomal protein S8-like [Glycine max]
          Length = 220

 Score =  272 bits (695), Expect = 1e-70
 Identities = 146/207 (70%), Positives = 151/207 (72%), Gaps = 3/207 (1%)
 Frame = -2

Query: 981 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 802
           MGISRDSMH                KYELGRQPANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 801 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 622
           LDTGNYSWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 621 EIGR---XXXXXXXXXXXXXXXXXXXXXXXSNHVARKIQSRQEDRKIDPHIEEQFGGGRL 451
           EIGR                          SNHV RK++ RQ+DRK+D HIEEQFGGGRL
Sbjct: 121 EIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRL 180

Query: 450 LAAISSRPGQCGRADGYILEGKELEFY 370
           LA ISSRPGQCGRADGYILEGKELEFY
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFY 207


>ref|XP_003547779.1| PREDICTED: 40S ribosomal protein S8 [Glycine max]
          Length = 219

 Score =  271 bits (694), Expect = 2e-70
 Identities = 146/206 (70%), Positives = 151/206 (73%), Gaps = 2/206 (0%)
 Frame = -2

Query: 981 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 802
           MGISRDSMH                KYELGRQPANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 801 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 622
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 621 EIGR--XXXXXXXXXXXXXXXXXXXXXXXSNHVARKIQSRQEDRKIDPHIEEQFGGGRLL 448
           EIGR                         SNH+ RK++ RQ+DRK+D HIEEQFGGGRLL
Sbjct: 121 EIGRKKKTAAKKETAEEGAAAVAVEEAKKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLL 180

Query: 447 AAISSRPGQCGRADGYILEGKELEFY 370
           A ISSRPGQCGRADGYILEGKELEFY
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFY 206


>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
           gi|255636051|gb|ACU18370.1| unknown [Glycine max]
          Length = 217

 Score =  271 bits (694), Expect = 2e-70
 Identities = 144/204 (70%), Positives = 149/204 (73%)
 Frame = -2

Query: 981 MGISRDSMHXXXXXXXXXXXXXXXXKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 802
           MGISRDSMH                KYELGRQ ANTKLSSNKT          VKWRALR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALR 60

Query: 801 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 622
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPF+QWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFRQWYLQHYGV 120

Query: 621 EIGRXXXXXXXXXXXXXXXXXXXXXXXSNHVARKIQSRQEDRKIDPHIEEQFGGGRLLAA 442
           EIGR                       SNHV RK++ RQ+DR +D HIEEQFGGGRLLA 
Sbjct: 121 EIGRKKKVAAKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLAC 180

Query: 441 ISSRPGQCGRADGYILEGKELEFY 370
           ISSRPGQCGRADGYILEGKELEFY
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFY 204


Top