BLASTX nr result

ID: Cnidium21_contig00004472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004472
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324330.1| chorismate mutase [Populus trichocarpa] gi|2...    75   3e-11
gb|AAB69323.1| cytosolic chorismate mutase 2 [Petroselinum crispum]    74   4e-11
gb|AAS21013.1| chorismate mutase [Hyacinthus orientalis]               49   5e-11
ref|NP_001067120.1| Os12g0578200 [Oryza sativa Japonica Group] g...    52   7e-11
ref|XP_002324083.1| chorismate mutase [Populus trichocarpa] gi|2...    51   1e-10

>ref|XP_002324330.1| chorismate mutase [Populus trichocarpa] gi|222865764|gb|EEF02895.1|
           chorismate mutase [Populus trichocarpa]
          Length = 255

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
 Frame = -2

Query: 530 EAGIYESPKEHHFFPGNLP-----SYNHPQILHST-AAININNAIWDVYVNQLLSLAVYC 369
           +AG Y +P+E+ FFP NLP     +YN+ Q+LHS  A+ININ AIWD+Y+NQLL L V  
Sbjct: 71  KAGRYVNPEENPFFPDNLPPSLVPNYNYSQVLHSGGASININKAIWDMYLNQLLPLFVVA 130

Query: 368 *G**WQNYVPTATSDLQCLQENLLRKVY 285
                 NY  TA SDL CLQ  L R+++
Sbjct: 131 GD--DGNYASTAASDLSCLQA-LSRRIH 155


>gb|AAB69323.1| cytosolic chorismate mutase 2 [Petroselinum crispum]
          Length = 82

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 45/68 (66%), Positives = 46/68 (67%), Gaps = 6/68 (8%)
 Frame = -2

Query: 494 FFPGNLPS-----YNHPQILHSTAA-ININNAIWDVYVNQLLSLAVYC*G**WQNYVPTA 333
           F P NLPS     YNHPQILH TAA ININ  IWD YVNQLL L  +       NYVPTA
Sbjct: 1   FDPDNLPSSLLPQYNHPQILHPTAAAININETIWDAYVNQLLPL--FTTEGDDGNYVPTA 58

Query: 332 TSDLQCLQ 309
           TSDLQCLQ
Sbjct: 59  TSDLQCLQ 66


>gb|AAS21013.1| chorismate mutase [Hyacinthus orientalis]
          Length = 289

 Score = 49.3 bits (116), Expect(2) = 5e-11
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
 Frame = -2

Query: 530 EAGIYESPKEHHFFPGN-----LPSYNHPQILHSTA-AININNAIWDVYVNQLL 387
           + G Y+SP EH FFP +     LP   +P++LH  A +ININ  IW++Y ++LL
Sbjct: 74  QVGRYKSPDEHPFFPEDLSEPMLPPIQYPKVLHPVADSININKTIWEMYFSKLL 127



 Score = 44.7 bits (104), Expect(2) = 5e-11
 Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
 Frame = -3

Query: 367 EGDNGKITCQLQLLIFNAC-----RRIYYGKFIAEVKYLDSPEDYAPAIRAE 227
           EGD+G   C    +    C     +RI+YGKF+AE KY ++P+ Y PAIRA+
Sbjct: 133 EGDDGN--CGSSAVCDTICLQALSKRIHYGKFVAEAKYQEAPDVYQPAIRAQ 182


>ref|NP_001067120.1| Os12g0578200 [Oryza sativa Japonica Group]
           gi|77556271|gb|ABA99067.1| Chorismate mutase,
           chloroplast precursor, putative, expressed [Oryza sativa
           Japonica Group] gi|113649627|dbj|BAF30139.1|
           Os12g0578200 [Oryza sativa Japonica Group]
           gi|215740619|dbj|BAG97275.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 332

 Score = 51.6 bits (122), Expect(2) = 7e-11
 Identities = 28/52 (53%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
 Frame = -2

Query: 524 GIYESPKEHHFFPGNL-----PSYNHPQILHSTAA-ININNAIWDVYVNQLL 387
           G Y+SP EH FFP NL     PS  +  +LH  AA ININ  IWDVY   LL
Sbjct: 151 GRYKSPDEHPFFPENLLEVVEPSVEYENVLHPAAANININKRIWDVYFGDLL 202



 Score = 42.0 bits (97), Expect(2) = 7e-11
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -3

Query: 370 AEGDNGKITCQLQLLIFNACRRIYYGKFIAEVKYLDSPEDYAPAI 236
           ++G+ G   C   L++    +RI+YGK++AE K+  +P+ Y PAI
Sbjct: 210 SDGNCGSSACWDMLILQALSKRIHYGKYVAEAKFQGAPDTYTPAI 254


>ref|XP_002324083.1| chorismate mutase [Populus trichocarpa] gi|222867085|gb|EEF04216.1|
           chorismate mutase [Populus trichocarpa]
          Length = 374

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
 Frame = -2

Query: 530 EAGIYESPKEHHFFPGNLPS-----YNHPQILHS-TAAININNAIWDVYVNQLL 387
           + G Y+SP EH FFP +LP        +PQ+LH  T +ININ  +WD+Y  +L+
Sbjct: 136 QLGRYKSPDEHPFFPDDLPEPVLPPLQYPQVLHPITDSININKTVWDMYFRELI 189



 Score = 41.2 bits (95), Expect(2) = 1e-10
 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = -3

Query: 367 EGDNGKI--TCQLQLLIFNAC-RRIYYGKFIAEVKYLDSPEDYAPAIRAE 227
           EGD+G    T     +   A  +RI+YG+F+AE K+  SP+DY  AIRA+
Sbjct: 195 EGDDGNCGSTAVCDTICLQALSKRIHYGEFVAEAKFRASPDDYEAAIRAQ 244


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