BLASTX nr result

ID: Cnidium21_contig00004470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004470
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-45
ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220...   175   3e-42
ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 com...   172   3e-41
ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 com...   169   2e-40
gb|ACU14735.1| unknown [Glycine max]                                  169   2e-40

>ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|222848728|gb|EEE86275.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/127 (70%), Positives = 105/127 (82%)
 Frame = -3

Query: 383 TCSSRPVDLQNFKKHAIPGAFVKWGLLGSCRNSSFATGFAPLKAKSLGSIIDIGRAEHQS 204
           T S +  +LQ  ++ AIPG F+KWG LG  R S FATGF PL+ K L SI+DI RA+ +S
Sbjct: 28  THSLKSANLQKQQEPAIPGHFLKWGSLGFVRTSRFATGFTPLEPKPLDSIMDIERAKTKS 87

Query: 203 PEDLAAIWDDFHLGRGHIGASMKANLYHLLEQRAADCRYFIMPLWKGSGYTTMFAQVQMP 24
           PEDLA+IWDD+HLGRGHIGASMKA LY LL QRAADC+YF++PLW+GSGYTTMFAQVQMP
Sbjct: 88  PEDLASIWDDYHLGRGHIGASMKAKLYQLLVQRAADCKYFVIPLWRGSGYTTMFAQVQMP 147

Query: 23  YMIFTGL 3
           +MIFTGL
Sbjct: 148 HMIFTGL 154


>ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220963 [Cucumis sativus]
           gi|449479251|ref|XP_004155549.1| PREDICTED:
           uncharacterized protein LOC101229737 [Cucumis sativus]
          Length = 248

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/119 (68%), Positives = 95/119 (79%)
 Frame = -3

Query: 359 LQNFKKHAIPGAFVKWGLLGSCRNSSFATGFAPLKAKSLGSIIDIGRAEHQSPEDLAAIW 180
           L   +K   P  F+KW  LG  R S FATGF PL+ K L SIID+ RA+ +SPEDLA+IW
Sbjct: 40  LGKLQKETNPSDFLKWSSLGFFRTSKFATGFNPLQPKPLDSIIDMERAKDRSPEDLASIW 99

Query: 179 DDFHLGRGHIGASMKANLYHLLEQRAADCRYFIMPLWKGSGYTTMFAQVQMPYMIFTGL 3
           DD+HLGRGHIG SMKA LYHLLEQRAADCRYF++PLW+GSGYTTMF QVQ P++IFTGL
Sbjct: 100 DDYHLGRGHIGISMKAKLYHLLEQRAADCRYFVIPLWRGSGYTTMFVQVQTPHIIFTGL 158


>ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
           [Vitis vinifera] gi|297740461|emb|CBI30643.3| unnamed
           protein product [Vitis vinifera]
          Length = 245

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/119 (67%), Positives = 95/119 (79%), Gaps = 2/119 (1%)
 Frame = -3

Query: 353 NFKK--HAIPGAFVKWGLLGSCRNSSFATGFAPLKAKSLGSIIDIGRAEHQSPEDLAAIW 180
           NF+K    IPG F KWG LG CR   FA+GF PL+ K LGSI+DI R + +S ED+A+IW
Sbjct: 37  NFRKLQQGIPGDFPKWGSLGFCRTLGFASGFTPLQPKPLGSILDIERVKDRSSEDIASIW 96

Query: 179 DDFHLGRGHIGASMKANLYHLLEQRAADCRYFIMPLWKGSGYTTMFAQVQMPYMIFTGL 3
           DD+HLGRGHI ASMK  LYHLLE RAA+CR+F++PLW+GSGY TMFAQVQM +MIFTGL
Sbjct: 97  DDYHLGRGHIAASMKPKLYHLLEHRAANCRHFVIPLWRGSGYATMFAQVQMQHMIFTGL 155


>ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
           [Glycine max]
          Length = 251

 Score =  169 bits (429), Expect = 2e-40
 Identities = 73/111 (65%), Positives = 92/111 (82%)
 Frame = -3

Query: 335 IPGAFVKWGLLGSCRNSSFATGFAPLKAKSLGSIIDIGRAEHQSPEDLAAIWDDFHLGRG 156
           IP  F KWG +G CR S FA+GF PL+ K L SI+D+ R + + PED+A++WDD+H+GRG
Sbjct: 51  IPSDFQKWGSVGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDDYHIGRG 110

Query: 155 HIGASMKANLYHLLEQRAADCRYFIMPLWKGSGYTTMFAQVQMPYMIFTGL 3
           HIGA+MKA LYHLLE RA++CRYF++PLW+GSGYTTMF QVQ P+MIFTGL
Sbjct: 111 HIGATMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGL 161


>gb|ACU14735.1| unknown [Glycine max]
          Length = 205

 Score =  169 bits (429), Expect = 2e-40
 Identities = 73/111 (65%), Positives = 92/111 (82%)
 Frame = -3

Query: 335 IPGAFVKWGLLGSCRNSSFATGFAPLKAKSLGSIIDIGRAEHQSPEDLAAIWDDFHLGRG 156
           IP  F KWG +G CR S FA+GF PL+ K L SI+D+ R + + PED+A++WDD+H+GRG
Sbjct: 51  IPSDFQKWGSVGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWDDYHIGRG 110

Query: 155 HIGASMKANLYHLLEQRAADCRYFIMPLWKGSGYTTMFAQVQMPYMIFTGL 3
           HIGA+MKA LYHLLE RA++CRYF++PLW+GSGYTTMF QVQ P+MIFTGL
Sbjct: 111 HIGATMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQTPHMIFTGL 161


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