BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004430
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869770.1| VIRB2-interacting protein 1 [Arabidopsis lyr...   321   3e-85
ref|NP_194094.1| reticulon-like protein B1 [Arabidopsis thaliana...   320   6e-85
gb|ACC91263.1| reticulon family protein [Capsella rubella]            319   8e-85
dbj|BAJ33905.1| unnamed protein product [Thellungiella halophila]     316   7e-84
ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|1...   316   9e-84

>ref|XP_002869770.1| VIRB2-interacting protein 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297315606|gb|EFH46029.1| VIRB2-interacting protein 1
            [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  321 bits (822), Expect = 3e-85
 Identities = 150/210 (71%), Positives = 180/210 (85%)
 Frame = -1

Query: 1018 TTLKEKVFRIFGREKPVHKVLGGGKPADVFLWKNKKVSGAVLGGATAIWFLFEVMEYYFL 839
            +++K KV+R+FGRE+PVHKVLGGGKPAD+F+WKNKK+SG VLGGATA W +FE+MEY+ L
Sbjct: 61   SSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLL 120

Query: 838  TLVSHGLILSLAIMFLWSNVTTFINKSPPKIPEVSIPEEPVKEIAASLRVEINRGFAILR 659
            TL+ H +I+ LA++FLWSN T FINKSPPKIPEV IPEEP+ ++A+ LR+EINRGF+ LR
Sbjct: 121  TLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSTLR 180

Query: 658  QIALGKDLKQFLSVVAGLWILSILGSCFNFLTLCYIGIVLLFTVPFLYDKYEDKVDPFVE 479
            +IA G+DLK+FL  +AGLW+LSILG CFNFLTL YI +VLLFTVP  YDKYEDKVDP  E
Sbjct: 181  EIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGE 240

Query: 478  KAVIEIKKQYAVFDAKVLSKIPKGSLGKKK 389
            KAVIE+KKQYAV D KVLSKIP G L  KK
Sbjct: 241  KAVIELKKQYAVLDEKVLSKIPLGPLKNKK 270


>ref|NP_194094.1| reticulon-like protein B1 [Arabidopsis thaliana]
            gi|75209124|sp|Q9SUR3.1|RTNLA_ARATH RecName:
            Full=Reticulon-like protein B1; Short=AtRTNLB1; AltName:
            Full=VirB2-interacting protein 1
            gi|4454032|emb|CAA23029.1| putative protein [Arabidopsis
            thaliana] gi|7269211|emb|CAB79318.1| putative protein
            [Arabidopsis thaliana] gi|15215586|gb|AAK91338.1|
            AT4g23630/F9D16_100 [Arabidopsis thaliana]
            gi|21593466|gb|AAM65433.1| unknown [Arabidopsis thaliana]
            gi|22137240|gb|AAM91465.1| AT4g23630/F9D16_100
            [Arabidopsis thaliana] gi|332659387|gb|AEE84787.1|
            reticulon-like protein B1 [Arabidopsis thaliana]
          Length = 275

 Score =  320 bits (819), Expect = 6e-85
 Identities = 149/211 (70%), Positives = 181/211 (85%)
 Frame = -1

Query: 1021 TTTLKEKVFRIFGREKPVHKVLGGGKPADVFLWKNKKVSGAVLGGATAIWFLFEVMEYYF 842
            ++++K KV+R+FGRE+PVHKVLGGGKPAD+F+WKNKK+SG VLGGATA W +FE+MEY+ 
Sbjct: 63   SSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHL 122

Query: 841  LTLVSHGLILSLAIMFLWSNVTTFINKSPPKIPEVSIPEEPVKEIAASLRVEINRGFAIL 662
            LTL+ H +I+ LA++FLWSN T FINKSPPKIPEV IPEEP+ ++A+ LR+EINRGF+ L
Sbjct: 123  LTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSL 182

Query: 661  RQIALGKDLKQFLSVVAGLWILSILGSCFNFLTLCYIGIVLLFTVPFLYDKYEDKVDPFV 482
            R+IA G+DLK+FL  +AGLW+LSILG CFNFLTL YI +VLLFTVP  YDKYEDKVDP  
Sbjct: 183  REIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLG 242

Query: 481  EKAVIEIKKQYAVFDAKVLSKIPKGSLGKKK 389
            EKA+IE+KKQYAV D KVLSKIP G L  KK
Sbjct: 243  EKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273


>gb|ACC91263.1| reticulon family protein [Capsella rubella]
          Length = 274

 Score =  319 bits (818), Expect = 8e-85
 Identities = 150/210 (71%), Positives = 179/210 (85%)
 Frame = -1

Query: 1018 TTLKEKVFRIFGREKPVHKVLGGGKPADVFLWKNKKVSGAVLGGATAIWFLFEVMEYYFL 839
            ++++ KV+R+FGREKPVHKVLGGGKPAD+F+WKNKK+SG VLG ATA W LFE+MEY+ L
Sbjct: 63   SSMQSKVYRLFGREKPVHKVLGGGKPADIFMWKNKKMSGGVLGAATAAWVLFELMEYHLL 122

Query: 838  TLVSHGLILSLAIMFLWSNVTTFINKSPPKIPEVSIPEEPVKEIAASLRVEINRGFAILR 659
            TL+ H +I+ LA++FLWSN T FINKSPPKIPEV IPEEP+ ++A+ LR+EINRGF+ LR
Sbjct: 123  TLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLR 182

Query: 658  QIALGKDLKQFLSVVAGLWILSILGSCFNFLTLCYIGIVLLFTVPFLYDKYEDKVDPFVE 479
            +IA G+DLK+FL  +AGLW+LSILG CFNFLTL YI +VLLFTVP  YDKYEDKVDP  E
Sbjct: 183  EIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGE 242

Query: 478  KAVIEIKKQYAVFDAKVLSKIPKGSLGKKK 389
            KAVIE+KKQYAV D KVLSKIP G L  KK
Sbjct: 243  KAVIELKKQYAVLDEKVLSKIPLGPLKNKK 272


>dbj|BAJ33905.1| unnamed protein product [Thellungiella halophila]
          Length = 275

 Score =  316 bits (810), Expect = 7e-84
 Identities = 149/210 (70%), Positives = 180/210 (85%)
 Frame = -1

Query: 1018 TTLKEKVFRIFGREKPVHKVLGGGKPADVFLWKNKKVSGAVLGGATAIWFLFEVMEYYFL 839
            ++++ KV+R+FGREKPVHKVLGGGKPA++F+WKNKK+SG VLG ATA W LFE+MEY+ L
Sbjct: 64   SSMQSKVYRLFGREKPVHKVLGGGKPAEIFMWKNKKMSGGVLGAATAAWVLFELMEYHLL 123

Query: 838  TLVSHGLILSLAIMFLWSNVTTFINKSPPKIPEVSIPEEPVKEIAASLRVEINRGFAILR 659
            TL+ H +I+ LA++FLWSN T FINKSPPKIPEV IPEEP+ ++A+ LR+EINRGF+ LR
Sbjct: 124  TLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLR 183

Query: 658  QIALGKDLKQFLSVVAGLWILSILGSCFNFLTLCYIGIVLLFTVPFLYDKYEDKVDPFVE 479
            +IA G+DLK+FLS VAGLW+LS+LG  FNFLTL YI +VLLFTVP +YDKYEDKVDP  E
Sbjct: 184  EIASGRDLKKFLSAVAGLWVLSVLGGWFNFLTLAYIALVLLFTVPIVYDKYEDKVDPLGE 243

Query: 478  KAVIEIKKQYAVFDAKVLSKIPKGSLGKKK 389
            KA+IEIKKQYAV D KVLSKIP G L  KK
Sbjct: 244  KAMIEIKKQYAVLDEKVLSKIPLGPLKNKK 273


>ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|118482989|gb|ABK93406.1|
            unknown [Populus trichocarpa] gi|222846762|gb|EEE84309.1|
            predicted protein [Populus trichocarpa]
          Length = 254

 Score =  316 bits (809), Expect = 9e-84
 Identities = 151/209 (72%), Positives = 181/209 (86%)
 Frame = -1

Query: 1015 TLKEKVFRIFGREKPVHKVLGGGKPADVFLWKNKKVSGAVLGGATAIWFLFEVMEYYFLT 836
            +LK K++R+FGREKPVHKVLGGGKPADVFLW+NKK+S  VLGGATAIW LFE++EY  +T
Sbjct: 44   SLKSKIYRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFELLEYNLVT 103

Query: 835  LVSHGLILSLAIMFLWSNVTTFINKSPPKIPEVSIPEEPVKEIAASLRVEINRGFAILRQ 656
            LV H LIL+LA++FLWSN +TFINKSPP+IPEV IPEEPV + AA+LR+EIN+GF++LR 
Sbjct: 104  LVCHCLILALALLFLWSNASTFINKSPPRIPEVCIPEEPVLQTAAALRIEINQGFSVLRD 163

Query: 655  IALGKDLKQFLSVVAGLWILSILGSCFNFLTLCYIGIVLLFTVPFLYDKYEDKVDPFVEK 476
            IA G+DLK FL+V+AGLW+LSI+GS  NF+TL YI  VLL TVP  Y+KYED+VD F EK
Sbjct: 164  IASGRDLKNFLTVIAGLWVLSIVGSWCNFVTLFYIAFVLLHTVPVFYEKYEDQVDAFAEK 223

Query: 475  AVIEIKKQYAVFDAKVLSKIPKGSLGKKK 389
            A+IEIKKQYAVFDAKVLSKIP+G L  KK
Sbjct: 224  AMIEIKKQYAVFDAKVLSKIPRGPLKDKK 252