BLASTX nr result
ID: Cnidium21_contig00004377
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00004377
(1119 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata] 363 e-105
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-... 375 e-105
emb|CBI17597.3| unnamed protein product [Vitis vinifera] 375 e-105
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|... 379 e-105
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera] 372 e-105
>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 363 bits (933), Expect(2) = e-105
Identities = 176/276 (63%), Positives = 224/276 (81%), Gaps = 2/276 (0%)
Frame = +2
Query: 2 CSRKLPGLIRNEPFDPEMWIIPGN--QMEAFREIKLSTATKVFTRGIRKIKRKVVADFVE 175
C+RK+PG IR+EPFD + W+IPG+ Q++ F E L + K+++RG +KIK K VAD VE
Sbjct: 1052 CARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLMPSVKMYSRGRQKIKSKRVADVVE 1111
Query: 176 ALIGAFLSSDGEVAALAFMNWLGIEVDFFNVPYKRSFPANPKQLVNISYLESILKYSFSD 355
ALIGAFLSS GEVAAL+FM WLG+++DF + P R FP N ++LVN+ YLES+L Y F D
Sbjct: 1112 ALIGAFLSSGGEVAALSFMKWLGVDIDFVDAPTPRHFPMNAEKLVNVRYLESLLDYKFHD 1171
Query: 356 ASLLVEALTHGSYMLPQIPQCYQRLEFLGDAVLDYLITMHLYKEYPEMSSGLLTDLRSAS 535
SLLVEALTHGSYMLP+IP+CYQRLEFLGDAVLDY +T HLY +YP +S G +TDLRSAS
Sbjct: 1172 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSAS 1231
Query: 536 VNNDCYSLSAVKVGLEKHILYLSQKLHRQILSSVQNLDPSLMGATFGWESENSLPEVLGD 715
VNN+CY+ +AVK GL KHIL+ SQ L RQI+++V N + +TFGWESE + P+VLGD
Sbjct: 1232 VNNECYAQAAVKAGLHKHILHASQDLQRQIVNTVLNFEKLDPASTFGWESETTFPKVLGD 1291
Query: 716 VIESLAGAIFIDSGYDKDIVFKSIRPLLEPLVSPET 823
VIESLAGAIF+DSG++KD+VF+S+R LLEPL++P+T
Sbjct: 1292 VIESLAGAIFVDSGFNKDVVFQSVRTLLEPLITPDT 1327
Score = 47.0 bits (110), Expect(2) = e-105
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 820 DAENYVLKKTAVSCDNGVTAVTVEVEADGVIHKESCT 930
D + Y+ KK VS +NGV +TVEVEADGV HK +C+
Sbjct: 1341 DQKGYIKKKNVVSRENGVAYITVEVEADGVSHKFTCS 1377
>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 375 bits (963), Expect(2) = e-105
Identities = 189/276 (68%), Positives = 221/276 (80%), Gaps = 2/276 (0%)
Frame = +2
Query: 2 CSRKLPGLIRNEPFDPEMWIIPGNQMEA--FREIKLSTATKVFTRGIRKIKRKVVADFVE 175
C RKLPG IRNE FDP+ WII G+Q + F E LS+ K++ RK+K K +AD VE
Sbjct: 1043 CDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVE 1102
Query: 176 ALIGAFLSSDGEVAALAFMNWLGIEVDFFNVPYKRSFPANPKQLVNISYLESILKYSFSD 355
ALIGAFLS+ GE AAL FM WLGI VDF VPYKR FP K+ VN+SYLESIL YSF D
Sbjct: 1103 ALIGAFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRD 1162
Query: 356 ASLLVEALTHGSYMLPQIPQCYQRLEFLGDAVLDYLITMHLYKEYPEMSSGLLTDLRSAS 535
SLLVEALTHGSYMLP+IP+CYQRLEFLGDAVLDYL+TMHLY +YP MS GLLTDLRSAS
Sbjct: 1163 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSAS 1222
Query: 536 VNNDCYSLSAVKVGLEKHILYLSQKLHRQILSSVQNLDPSLMGATFGWESENSLPEVLGD 715
VNNDCY+ SAVK L +HIL+ SQ+LHR I+ +V N D + +TFGWESE+S P+VLGD
Sbjct: 1223 VNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGD 1282
Query: 716 VIESLAGAIFIDSGYDKDIVFKSIRPLLEPLVSPET 823
VIESLAGAI +DS Y+K++VF+SIRPLLEPL++PET
Sbjct: 1283 VIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPET 1318
Score = 35.0 bits (79), Expect(2) = e-105
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 826 ENYVLKKTAVSCDNGVTAVTVEVEADGVIHKESCTA 933
E+Y +K+ VS NG +VT+EVEA+G HK + T+
Sbjct: 1334 EHYDIKRVVVS-QNGKASVTIEVEANGAKHKHTSTS 1368
>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 375 bits (963), Expect(2) = e-105
Identities = 189/276 (68%), Positives = 221/276 (80%), Gaps = 2/276 (0%)
Frame = +2
Query: 2 CSRKLPGLIRNEPFDPEMWIIPGNQMEA--FREIKLSTATKVFTRGIRKIKRKVVADFVE 175
C RKLPG IRNE FDP+ WII G+Q + F E LS+ K++ RK+K K +AD VE
Sbjct: 989 CDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVE 1048
Query: 176 ALIGAFLSSDGEVAALAFMNWLGIEVDFFNVPYKRSFPANPKQLVNISYLESILKYSFSD 355
ALIGAFLS+ GE AAL FM WLGI VDF VPYKR FP K+ VN+SYLESIL YSF D
Sbjct: 1049 ALIGAFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRD 1108
Query: 356 ASLLVEALTHGSYMLPQIPQCYQRLEFLGDAVLDYLITMHLYKEYPEMSSGLLTDLRSAS 535
SLLVEALTHGSYMLP+IP+CYQRLEFLGDAVLDYL+TMHLY +YP MS GLLTDLRSAS
Sbjct: 1109 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSAS 1168
Query: 536 VNNDCYSLSAVKVGLEKHILYLSQKLHRQILSSVQNLDPSLMGATFGWESENSLPEVLGD 715
VNNDCY+ SAVK L +HIL+ SQ+LHR I+ +V N D + +TFGWESE+S P+VLGD
Sbjct: 1169 VNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGNFDKLPVESTFGWESESSFPKVLGD 1228
Query: 716 VIESLAGAIFIDSGYDKDIVFKSIRPLLEPLVSPET 823
VIESLAGAI +DS Y+K++VF+SIRPLLEPL++PET
Sbjct: 1229 VIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPET 1264
Score = 35.0 bits (79), Expect(2) = e-105
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 826 ENYVLKKTAVSCDNGVTAVTVEVEADGVIHKESCTA 933
E+Y +K+ VS NG +VT+EVEA+G HK + T+
Sbjct: 1280 EHYDIKRVVVS-QNGKASVTIEVEANGAKHKHTSTS 1314
>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 379 bits (973), Expect(2) = e-105
Identities = 181/278 (65%), Positives = 227/278 (81%), Gaps = 2/278 (0%)
Frame = +2
Query: 2 CSRKLPGLIRNEPFDPEMWIIPGNQM--EAFREIKLSTATKVFTRGIRKIKRKVVADFVE 175
C+ KL G IRNE FDP++WIIPG ++ + E LS K++ RG RK+K K +AD VE
Sbjct: 1110 CNHKLQGFIRNESFDPKLWIIPGGKLGSDFLSEEPLSKGRKIYIRGRRKVKSKTIADVVE 1169
Query: 176 ALIGAFLSSDGEVAALAFMNWLGIEVDFFNVPYKRSFPANPKQLVNISYLESILKYSFSD 355
ALIGA+LS+ GEV AL FM+W+GI+VDF N PY+R ++ VN+ YLES+L YSF+D
Sbjct: 1170 ALIGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKFVNVRYLESLLNYSFND 1229
Query: 356 ASLLVEALTHGSYMLPQIPQCYQRLEFLGDAVLDYLITMHLYKEYPEMSSGLLTDLRSAS 535
SLLVEALTHGSYMLP+IP+CYQRLEFLGDAVLDYLIT+H+YKEYP MS GLLTDLRSAS
Sbjct: 1230 PSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLTDLRSAS 1289
Query: 536 VNNDCYSLSAVKVGLEKHILYLSQKLHRQILSSVQNLDPSLMGATFGWESENSLPEVLGD 715
VNNDCY+LSAVKVGL++HIL+ S LH+ I+++V+ + + +TFGWESE + P+VLGD
Sbjct: 1290 VNNDCYALSAVKVGLDRHILHASHDLHKHIVATVKKIQEFSLESTFGWESETAFPKVLGD 1349
Query: 716 VIESLAGAIFIDSGYDKDIVFKSIRPLLEPLVSPETRR 829
VIESLAGAI +DSGY+K++VF+SIRPLLEPL++PET R
Sbjct: 1350 VIESLAGAILVDSGYNKEVVFESIRPLLEPLITPETLR 1387
Score = 29.3 bits (64), Expect(2) = e-105
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 826 ENYVLKKTAVSCDNGVTAVTVEVEADGVIHKESCT 930
+++ KK VS + +VT+EVEA+G+I K + T
Sbjct: 1401 QHFDYKKPIVSRNGRNASVTIEVEANGLIFKHTAT 1435
>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 372 bits (956), Expect(2) = e-105
Identities = 187/276 (67%), Positives = 220/276 (79%), Gaps = 2/276 (0%)
Frame = +2
Query: 2 CSRKLPGLIRNEPFDPEMWIIPGNQMEA--FREIKLSTATKVFTRGIRKIKRKVVADFVE 175
C RKLPG IRNE FDP+ WII G+Q + F E LS+ K++ RK+K K +AD VE
Sbjct: 945 CDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEELLSSTRKIYVSERRKLKSKRIADVVE 1004
Query: 176 ALIGAFLSSDGEVAALAFMNWLGIEVDFFNVPYKRSFPANPKQLVNISYLESILKYSFSD 355
ALIGAFLS+ GE AAL FM WLGI VDF VPYKR FP K+ VN+SYLESIL YSF D
Sbjct: 1005 ALIGAFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSYLESILNYSFRD 1064
Query: 356 ASLLVEALTHGSYMLPQIPQCYQRLEFLGDAVLDYLITMHLYKEYPEMSSGLLTDLRSAS 535
SLLVE+LTHGSYMLP+IP+CYQRLEFLGDAVLDYL+TMHLY +YP MS GLLTDLRSAS
Sbjct: 1065 PSLLVESLTHGSYMLPEIPRCYQRLEFLGDAVLDYLMTMHLYHKYPGMSPGLLTDLRSAS 1124
Query: 536 VNNDCYSLSAVKVGLEKHILYLSQKLHRQILSSVQNLDPSLMGATFGWESENSLPEVLGD 715
VNNDCY+ SAVK L +HIL+ SQ+LHR I+ +V + D +TFGWESE+S P+VLGD
Sbjct: 1125 VNNDCYAQSAVKAKLHQHILHSSQELHRHIVVTVGBFDKLPXESTFGWESESSFPKVLGD 1184
Query: 716 VIESLAGAIFIDSGYDKDIVFKSIRPLLEPLVSPET 823
VIESLAGAI +DS Y+K++VF+SIRPLLEPL++PET
Sbjct: 1185 VIESLAGAILVDSDYNKEVVFQSIRPLLEPLITPET 1220
Score = 35.8 bits (81), Expect(2) = e-105
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 826 ENYVLKKTAVSCDNGVTAVTVEVEADGVIHKESCTA 933
E+Y +K+ VS NG +VT+EVEA+G HK + T+
Sbjct: 1236 EHYXIKRVVVS-QNGKASVTIEVEANGAKHKHTSTS 1270