BLASTX nr result

ID: Cnidium21_contig00004370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004370
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containin...    60   2e-07
ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus c...    58   9e-07
dbj|BAJ34229.1| unnamed protein product [Thellungiella halophila]      57   2e-06
emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]    56   3e-06
emb|CBI27968.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_002283114.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Vitis vinifera]
          Length = 388

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 47/119 (39%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
 Frame = -3

Query: 396 QLNKVKSSIPTSWALQMXXXXXXXXXXXXXXLTRVGFXXXXXXXXXXXXXXXSGYGDLWE 217
           QL+KVKS+ P+SW + M                R GF                G+ DL+E
Sbjct: 282 QLSKVKSA-PSSWCVHMGSPGGFGSPRASII--RPGFCSLPSTPTRAPKRHGLGFVDLFE 338

Query: 216 KMKLDXXXXXXXXXXXXESGRVLRAKMFEKLSKENPLDRVDPDL-----DLGWVSDLVK 55
           +                ESGR LRAKMFEKLSKEN LDR DP       D+GWVS+LVK
Sbjct: 339 E---------EPAMERVESGRDLRAKMFEKLSKENSLDRPDPSASGAGPDVGWVSELVK 388


>ref|XP_002514184.1| hypothetical protein RCOM_1048570 [Ricinus communis]
           gi|223546640|gb|EEF48138.1| hypothetical protein
           RCOM_1048570 [Ricinus communis]
          Length = 259

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
 Frame = -3

Query: 396 QLNKVKSSIPTSWALQMXXXXXXXXXXXXXXLTRVGFXXXXXXXXXXXXXXXSGYGDLWE 217
           QL K++S +P+SW +Q+                R GF                GY D+W+
Sbjct: 148 QLGKMRS-LPSSWNVQVGGSGFGSPRSGSVL--RPGFCSLPTTPTSAPTRSGLGYRDMWD 204

Query: 216 KMKLDXXXXXXXXXXXXESGRVLRAKMFEKLSKENPLDRVDPD-------LDLGWVSDLV 58
            +               ESGR LRAKMFEKLSKEN L RV+PD        D+GWVS+LV
Sbjct: 205 DV------IEEPAMERVESGRGLRAKMFEKLSKENSLGRVEPDPAQSGSAPDVGWVSELV 258


>dbj|BAJ34229.1| unnamed protein product [Thellungiella halophila]
          Length = 359

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/68 (51%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
 Frame = -3

Query: 237 GYGDLWEKMKLDXXXXXXXXXXXXESGRVLRAKMFEKLSKENPLDRVDPD--------LD 82
           GY D+W     D            ESGR LRAKMFEKLSKEN +DRVDPD         D
Sbjct: 295 GYTDIW-----DNGLEEEPAMERVESGRELRAKMFEKLSKENCMDRVDPDPYQGSGEAPD 349

Query: 81  LGWVSDLV 58
           +GWVS+LV
Sbjct: 350 VGWVSELV 357


>emb|CAN81808.1| hypothetical protein VITISV_013303 [Vitis vinifera]
          Length = 460

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 45/117 (38%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
 Frame = -3

Query: 396 QLNKVKSSIPTSWALQMXXXXXXXXXXXXXXLTRVGFXXXXXXXXXXXXXXXSGYGDLWE 217
           QL+KVKS+ P+SW + M                R GF                G+ DL+E
Sbjct: 322 QLSKVKSA-PSSWCVHMGSPGGFGSPRASII--RPGFCSLPSTPTRAPKRHGLGFVDLFE 378

Query: 216 KMKLDXXXXXXXXXXXXESGRVLRAKMFEKLSKENPLDRVDPDL-----DLGWVSDL 61
           +                ESGR LRAKMFEKLSKEN LDR DP       D+GWVS+L
Sbjct: 379 E---------EPAMERVESGRDLRAKMFEKLSKENSLDRPDPSASGAGPDVGWVSEL 426


>emb|CBI27968.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/41 (70%), Positives = 31/41 (75%), Gaps = 5/41 (12%)
 Frame = -3

Query: 162 SGRVLRAKMFEKLSKENPLDRVDPDL-----DLGWVSDLVK 55
           SGR LRAKMFEKLSKEN LDR DP       D+GWVS+LVK
Sbjct: 281 SGRDLRAKMFEKLSKENSLDRPDPSASGAGPDVGWVSELVK 321


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