BLASTX nr result

ID: Cnidium21_contig00004365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004365
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324031.1| predicted protein [Populus trichocarpa] gi|2...   650   0.0  
ref|XP_002305328.1| predicted protein [Populus trichocarpa] gi|1...   644   0.0  
ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 compone...   643   0.0  
ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 compone...   643   0.0  
ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 compone...   643   0.0  

>ref|XP_002324031.1| predicted protein [Populus trichocarpa] gi|222867033|gb|EEF04164.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  650 bits (1678), Expect = 0.0
 Identities = 328/376 (87%), Positives = 343/376 (91%), Gaps = 5/376 (1%)
 Frame = +3

Query: 3    EKKGSFFMVRSDGRVS-----NNGISTRTDKLVTNAVAAKTDTPAASATSKSGHELLLFE 167
            E+K SF +VRSDG V+     +N  + R D+L+TNAVA K D+ AAS+TSK GHELLLFE
Sbjct: 36   ERKVSFSVVRSDGTVNLNLGGSNARARRVDQLITNAVATKADSSAASSTSKPGHELLLFE 95

Query: 168  ALREGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGI 347
            ALREGLEEEMDRDP VCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFTGMGI
Sbjct: 96   ALREGLEEEMDRDPHVCVMGEDVGHYGGSYKVTKGLADKYGDLRVLDTPIAENSFTGMGI 155

Query: 348  GAAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAE 527
            GAAMTGLRP+IEGMNMGFLLLAFNQISNNCGMLHYTSGGQFT             QLGAE
Sbjct: 156  GAAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGAE 215

Query: 528  HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEEY 707
            HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE+IPDEEY
Sbjct: 216  HSQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEY 275

Query: 708  ICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGN 887
            ICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGN
Sbjct: 276  ICNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGN 335

Query: 888  SVKKTHRVLIVEECMRTGGIGASLTAAINENFQDYLDAPIVCLSSQDVPTPYAGTLEEFT 1067
            SVKKTHRVLIVEECMRTGGIGASLTAAI ENF DYLDAPIVCLSSQDVPTPYAGTLEE+T
Sbjct: 336  SVKKTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWT 395

Query: 1068 IVQPAQIVTAVEQLCR 1115
            +VQPAQIVTAVEQLC+
Sbjct: 396  VVQPAQIVTAVEQLCQ 411


>ref|XP_002305328.1| predicted protein [Populus trichocarpa] gi|118482251|gb|ABK93053.1|
            unknown [Populus trichocarpa] gi|222848292|gb|EEE85839.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  644 bits (1660), Expect = 0.0
 Identities = 325/375 (86%), Positives = 338/375 (90%), Gaps = 5/375 (1%)
 Frame = +3

Query: 6    KKGSFFMVRSDGRV-----SNNGISTRTDKLVTNAVAAKTDTPAASATSKSGHELLLFEA 170
            K  SF +VRSDG +     S+NG +   DKL+TNAVA K DT AAS+ SK GHELLLFEA
Sbjct: 41   KASSFLVVRSDGSLNLNLGSSNGRARTVDKLITNAVATKADTSAASSASKPGHELLLFEA 100

Query: 171  LREGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIG 350
            LREGLEEEMDRD  VCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFTGMGIG
Sbjct: 101  LREGLEEEMDRDLHVCVMGEDVGHYGGSYKVTKGLAEKYGDLRVLDTPIAENSFTGMGIG 160

Query: 351  AAMTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEH 530
            AAMTGLRP+IEGMNMGFLLLAFNQISNNCGMLHYTSGGQFT             QLGAEH
Sbjct: 161  AAMTGLRPIIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTIPVVIRGPGGVGRQLGAEH 220

Query: 531  SQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEEYI 710
            SQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE+IPDEEYI
Sbjct: 221  SQRLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYI 280

Query: 711  CNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNS 890
            CNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLH IGNS
Sbjct: 281  CNLEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHMIGNS 340

Query: 891  VKKTHRVLIVEECMRTGGIGASLTAAINENFQDYLDAPIVCLSSQDVPTPYAGTLEEFTI 1070
            VKKTHRV+IVEECMRTGGIGASLTAAI ENF DYLDAPIVCLSSQDVPTPYAGTLEE+T+
Sbjct: 341  VKKTHRVMIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEEWTV 400

Query: 1071 VQPAQIVTAVEQLCR 1115
            VQPAQIVTAVEQLC+
Sbjct: 401  VQPAQIVTAVEQLCQ 415


>ref|XP_004162812.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
            [Cucumis sativus]
          Length = 677

 Score =  643 bits (1659), Expect = 0.0
 Identities = 322/373 (86%), Positives = 340/373 (91%), Gaps = 2/373 (0%)
 Frame = +3

Query: 3    EKKGSFFMVRSDGRVSNNGIS--TRTDKLVTNAVAAKTDTPAASATSKSGHELLLFEALR 176
            E+KG FF+VRSD   +N+  +  +R+  L+TNAVA K DT + S TSK GHELLLFEALR
Sbjct: 305  ERKGRFFIVRSDVTGANHAFTPRSRSHHLITNAVATKADTSSPSTTSKPGHELLLFEALR 364

Query: 177  EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAA 356
            EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAA
Sbjct: 365  EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAA 424

Query: 357  MTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQ 536
            MTGLRP++EGMNMGFLLLAFNQISNNCGMLHYTSGGQF              QLGAEHSQ
Sbjct: 425  MTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGAEHSQ 484

Query: 537  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEEYICN 716
            RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE+IPDEEYIC+
Sbjct: 485  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICS 544

Query: 717  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 896
            LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK
Sbjct: 545  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 604

Query: 897  KTHRVLIVEECMRTGGIGASLTAAINENFQDYLDAPIVCLSSQDVPTPYAGTLEEFTIVQ 1076
            KTHRVLIVEECMRTGGIGASLTAAI ENF DYLDAPIVCLSSQDVPTPYAGTLE++T+VQ
Sbjct: 605  KTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEDWTVVQ 664

Query: 1077 PAQIVTAVEQLCR 1115
            PAQIVTAVEQLC+
Sbjct: 665  PAQIVTAVEQLCQ 677


>ref|XP_004149671.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
            isoform 2 [Cucumis sativus]
          Length = 410

 Score =  643 bits (1659), Expect = 0.0
 Identities = 322/373 (86%), Positives = 340/373 (91%), Gaps = 2/373 (0%)
 Frame = +3

Query: 3    EKKGSFFMVRSDGRVSNNGIS--TRTDKLVTNAVAAKTDTPAASATSKSGHELLLFEALR 176
            E+KG FF+VRSD   +N+  +  +R+  L+TNAVA K DT + S TSK GHELLLFEALR
Sbjct: 38   ERKGRFFIVRSDVTGANHAFTPRSRSHHLITNAVATKADTSSPSTTSKPGHELLLFEALR 97

Query: 177  EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAA 356
            EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAA
Sbjct: 98   EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAA 157

Query: 357  MTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQ 536
            MTGLRP++EGMNMGFLLLAFNQISNNCGMLHYTSGGQF              QLGAEHSQ
Sbjct: 158  MTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGAEHSQ 217

Query: 537  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEEYICN 716
            RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE+IPDEEYIC+
Sbjct: 218  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICS 277

Query: 717  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 896
            LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK
Sbjct: 278  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 337

Query: 897  KTHRVLIVEECMRTGGIGASLTAAINENFQDYLDAPIVCLSSQDVPTPYAGTLEEFTIVQ 1076
            KTHRVLIVEECMRTGGIGASLTAAI ENF DYLDAPIVCLSSQDVPTPYAGTLE++T+VQ
Sbjct: 338  KTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEDWTVVQ 397

Query: 1077 PAQIVTAVEQLCR 1115
            PAQIVTAVEQLC+
Sbjct: 398  PAQIVTAVEQLCQ 410


>ref|XP_004149670.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-like
            isoform 1 [Cucumis sativus]
          Length = 437

 Score =  643 bits (1659), Expect = 0.0
 Identities = 322/373 (86%), Positives = 340/373 (91%), Gaps = 2/373 (0%)
 Frame = +3

Query: 3    EKKGSFFMVRSDGRVSNNGIS--TRTDKLVTNAVAAKTDTPAASATSKSGHELLLFEALR 176
            E+KG FF+VRSD   +N+  +  +R+  L+TNAVA K DT + S TSK GHELLLFEALR
Sbjct: 65   ERKGRFFIVRSDVTGANHAFTPRSRSHHLITNAVATKADTSSPSTTSKPGHELLLFEALR 124

Query: 177  EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLAPKFGDLRVLDTPIAENSFTGMGIGAA 356
            EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLA K+GDLRVLDTPIAENSFTGMGIGAA
Sbjct: 125  EGLEEEMDRDPRVCVMGEDVGHYGGSYKVTKGLATKYGDLRVLDTPIAENSFTGMGIGAA 184

Query: 357  MTGLRPVIEGMNMGFLLLAFNQISNNCGMLHYTSGGQFTXXXXXXXXXXXXXQLGAEHSQ 536
            MTGLRP++EGMNMGFLLLAFNQISNNCGMLHYTSGGQF              QLGAEHSQ
Sbjct: 185  MTGLRPIVEGMNMGFLLLAFNQISNNCGMLHYTSGGQFKIPIVIRGPGGVGRQLGAEHSQ 244

Query: 537  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKEKIPDEEYICN 716
            RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKE+IPDEEYIC+
Sbjct: 245  RLESYFQSIPGIQMVACSTPYNAKGLMKAAIRSENPVILFEHVLLYNLKERIPDEEYICS 304

Query: 717  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 896
            LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK
Sbjct: 305  LEEAEMVRPGEHVTILTYSRMRYHVMQAAKTLVNKGYDPEVIDIRSLKPFDLHTIGNSVK 364

Query: 897  KTHRVLIVEECMRTGGIGASLTAAINENFQDYLDAPIVCLSSQDVPTPYAGTLEEFTIVQ 1076
            KTHRVLIVEECMRTGGIGASLTAAI ENF DYLDAPIVCLSSQDVPTPYAGTLE++T+VQ
Sbjct: 365  KTHRVLIVEECMRTGGIGASLTAAITENFHDYLDAPIVCLSSQDVPTPYAGTLEDWTVVQ 424

Query: 1077 PAQIVTAVEQLCR 1115
            PAQIVTAVEQLC+
Sbjct: 425  PAQIVTAVEQLCQ 437


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