BLASTX nr result

ID: Cnidium21_contig00004323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004323
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis] gi|...   241   3e-61
ref|XP_003555964.1| PREDICTED: uncharacterized protein LOC100527...   237   4e-60
ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vi...   237   4e-60
ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [...   234   2e-59
ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-li...   234   4e-59

>ref|XP_002518680.1| Reticulon-3, putative [Ricinus communis]
           gi|223542061|gb|EEF43605.1| Reticulon-3, putative
           [Ricinus communis]
          Length = 207

 Score =  241 bits (614), Expect = 3e-61
 Identities = 122/207 (58%), Positives = 152/207 (73%), Gaps = 3/207 (1%)
 Frame = -2

Query: 971 MGDS---PRSSIHLALGGDAVADVLLWKNWIGSLVLLVSSTVFWILFKIAGYNLLQFIAN 801
           MG+S    R S+H  LGG +VADVLLWK W  S+ ++V +T  W+LF+ AGYN L F+AN
Sbjct: 1   MGESIPPRRISVHQCLGGGSVADVLLWKKWCSSVTIVVGATSLWMLFEQAGYNFLSFVAN 60

Query: 800 VLLLLVTILFFWAKSASILNRXXXXXXXXDVSEETFLEVAEVMCELGNRALSIARDIAIG 621
           VL LL+ ILFFWAKSAS+LNR        ++SEET ++VA V+    N ALSIARDIAIG
Sbjct: 61  VLFLLLAILFFWAKSASLLNRPLPPLPDLEISEETIVKVAGVIQVYANIALSIARDIAIG 120

Query: 620 GDLKLLLQVVSSLWLISVIGGLFDFLTLIYVGILLSLSVPVLYEKHQDQIDDKLSIAHNV 441
            +LKL LQV   LW++S IG L +FLTL+Y+GILLS SVPVLY+K+Q  ID+KLS+ H +
Sbjct: 121 RNLKLFLQVAFGLWIVSYIGSLCNFLTLLYIGILLSFSVPVLYDKYQHHIDEKLSVTHKI 180

Query: 440 FQAQYRKLDDIILSKIPFPKSKEKKTQ 360
            Q QYRK+DD  L KIPFP +KEKK Q
Sbjct: 181 IQTQYRKIDDSFLKKIPFPLNKEKKIQ 207


>ref|XP_003555964.1| PREDICTED: uncharacterized protein LOC100527029 [Glycine max]
          Length = 204

 Score =  237 bits (604), Expect = 4e-60
 Identities = 119/204 (58%), Positives = 151/204 (74%)
 Frame = -2

Query: 971 MGDSPRSSIHLALGGDAVADVLLWKNWIGSLVLLVSSTVFWILFKIAGYNLLQFIANVLL 792
           MGDS R S+H  LG   VADV+LWKNW G++ +LVS+T  W LF+ AGYN L F+ANV+L
Sbjct: 1   MGDSNRISVHRVLGEGLVADVVLWKNWRGAVAVLVSATTLWYLFERAGYNFLSFVANVVL 60

Query: 791 LLVTILFFWAKSASILNRXXXXXXXXDVSEETFLEVAEVMCELGNRALSIARDIAIGGDL 612
           LLV ILFFWAK+A++LNR        ++SEET   VA+ +    NRALS+A DIAI  +L
Sbjct: 61  LLVAILFFWAKAANLLNRPLPPLPDLEISEETIARVADALQIWLNRALSVAHDIAIERNL 120

Query: 611 KLLLQVVSSLWLISVIGGLFDFLTLIYVGILLSLSVPVLYEKHQDQIDDKLSIAHNVFQA 432
            L LQVV  LW+IS IG LF+FLTLIY+G+LLSLS+PVLY+K+QDQ+D +L + H V Q 
Sbjct: 121 LLCLQVVGVLWVISYIGSLFNFLTLIYIGVLLSLSLPVLYDKYQDQVDGRLGVIHGVIQT 180

Query: 431 QYRKLDDIILSKIPFPKSKEKKTQ 360
           QY+K+  I+LSKIP   +KEKK Q
Sbjct: 181 QYKKIHSIVLSKIPKLSNKEKKVQ 204


>ref|XP_002285375.1| PREDICTED: reticulon family protein-like [Vitis vinifera]
           gi|296090446|emb|CBI40265.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  237 bits (604), Expect = 4e-60
 Identities = 120/207 (57%), Positives = 154/207 (74%), Gaps = 3/207 (1%)
 Frame = -2

Query: 971 MGDSP---RSSIHLALGGDAVADVLLWKNWIGSLVLLVSSTVFWILFKIAGYNLLQFIAN 801
           MG+S    R S+H ALGG +VAD LLW+ W G+ V LVS++  W LF+ AGYNLL F+AN
Sbjct: 1   MGESDHPSRISVHQALGGGSVADFLLWRRWCGAAVCLVSASSLWFLFERAGYNLLSFVAN 60

Query: 800 VLLLLVTILFFWAKSASILNRXXXXXXXXDVSEETFLEVAEVMCELGNRALSIARDIAIG 621
           V+LLLV ILF WAKSASILNR        ++SEE+ ++ A+V+    N ALS+ARDIA+G
Sbjct: 61  VVLLLVVILFLWAKSASILNRPLPPLPDMEISEESVVKAADVIRVWINYALSVARDIAVG 120

Query: 620 GDLKLLLQVVSSLWLISVIGGLFDFLTLIYVGILLSLSVPVLYEKHQDQIDDKLSIAHNV 441
            ++KL LQV   LW++S IG LF+FLTL+Y+G++LSLSVPVLY+K+QD IDDKL + H V
Sbjct: 121 RNVKLFLQVAFGLWVVSYIGSLFNFLTLVYIGVVLSLSVPVLYDKYQDHIDDKLRVTHRV 180

Query: 440 FQAQYRKLDDIILSKIPFPKSKEKKTQ 360
            Q QY+K+DD IL KIP P +  KKTQ
Sbjct: 181 VQTQYKKIDDKILRKIPMPINMGKKTQ 207


>ref|XP_004140714.1| PREDICTED: reticulon-like protein B11-like [Cucumis sativus]
          Length = 207

 Score =  234 bits (598), Expect = 2e-59
 Identities = 118/201 (58%), Positives = 147/201 (73%)
 Frame = -2

Query: 962 SPRSSIHLALGGDAVADVLLWKNWIGSLVLLVSSTVFWILFKIAGYNLLQFIANVLLLLV 783
           S R S+H ALGG  VADVLLWK W G +V+L S+T  W LF+ AGYN L F+ANVLLLLV
Sbjct: 7   SRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLV 66

Query: 782 TILFFWAKSASILNRXXXXXXXXDVSEETFLEVAEVMCELGNRALSIARDIAIGGDLKLL 603
            ILFFWAKSAS+LNR        ++SEE+   VA  +    N ALSIARDIAIG +LKL 
Sbjct: 67  IILFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLF 126

Query: 602 LQVVSSLWLISVIGGLFDFLTLIYVGILLSLSVPVLYEKHQDQIDDKLSIAHNVFQAQYR 423
           LQV  +LW++S IG  F+FLTL+Y+G+LLSLS P++Y+K+QD ID+KL + H   Q QY+
Sbjct: 127 LQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYK 186

Query: 422 KLDDIILSKIPFPKSKEKKTQ 360
           KLD+ +L KIP P +KEKK Q
Sbjct: 187 KLDENVLRKIPLPLNKEKKMQ 207


>ref|XP_004157344.1| PREDICTED: LOW QUALITY PROTEIN: reticulon-like protein B11-like
           [Cucumis sativus]
          Length = 207

 Score =  234 bits (596), Expect = 4e-59
 Identities = 118/201 (58%), Positives = 146/201 (72%)
 Frame = -2

Query: 962 SPRSSIHLALGGDAVADVLLWKNWIGSLVLLVSSTVFWILFKIAGYNLLQFIANVLLLLV 783
           S R S+H ALGG  VADVLLWK W G +V+L S+T  W LF+ AGYN L F+ANVLLLLV
Sbjct: 7   SRRISVHQALGGGHVADVLLWKKWCGGVVMLTSATALWYLFERAGYNFLSFVANVLLLLV 66

Query: 782 TILFFWAKSASILNRXXXXXXXXDVSEETFLEVAEVMCELGNRALSIARDIAIGGDLKLL 603
            I FFWAKSAS+LNR        ++SEE+   VA  +    N ALSIARDIAIG +LKL 
Sbjct: 67  IIXFFWAKSASLLNRPLPPLPDLEISEESVSMVANELRFCINFALSIARDIAIGRNLKLF 126

Query: 602 LQVVSSLWLISVIGGLFDFLTLIYVGILLSLSVPVLYEKHQDQIDDKLSIAHNVFQAQYR 423
           LQV  +LW++S IG  F+FLTL+Y+G+LLSLS P++Y+K+QD ID+KL + H   Q QYR
Sbjct: 127 LQVALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYR 186

Query: 422 KLDDIILSKIPFPKSKEKKTQ 360
           KLD+ +L KIP P +KEKK Q
Sbjct: 187 KLDENVLRKIPLPLNKEKKMQ 207


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