BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004322
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu...   228   1e-57
gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595...   226   2e-57
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|1...   225   6e-57
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   224   1e-56
ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana...   223   3e-56

>ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223549811|gb|EEF51299.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  228 bits (580), Expect = 1e-57
 Identities = 114/152 (75%), Positives = 131/152 (86%)
 Frame = +1

Query: 94  YSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLS 273
           Y QH     S  P+      P++  L +EA  +TR++NR ARHVRIRKKVEGT ERPRLS
Sbjct: 15  YRQHLSASISARPNPTPIQPPRF--LRIEANTKTRRENRTARHVRIRKKVEGTPERPRLS 72

Query: 274 VFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKTCIDK 453
           VFRSNKH+YVQVIDD+KMHTLASASTMQKPISEEFD+S+GPT++VAKKVGEVIAK+C++K
Sbjct: 73  VFRSNKHLYVQVIDDSKMHTLASASTMQKPISEEFDYSSGPTLEVAKKVGEVIAKSCLEK 132

Query: 454 GITKVAFDRGGYPYHGRIEALADAAREHGLQF 549
           GITKVAFDRGGYPYHGRIEALADAARE+GLQF
Sbjct: 133 GITKVAFDRGGYPYHGRIEALADAARENGLQF 164


>gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown
           [Lotus japonicus]
          Length = 162

 Score =  226 bits (577), Expect = 2e-57
 Identities = 116/165 (70%), Positives = 133/165 (80%)
 Frame = +1

Query: 55  ASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHVRIR 234
           ASSLSFLH  +   S     L +      S P P     VVEAK+RTR D+R ARH RIR
Sbjct: 3   ASSLSFLHSCAFPSSSSSSSLFTT-----STPNPNSLPFVVEAKSRTRTDDRTARHARIR 57

Query: 235 KKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTIDVAK 414
           KKVEGT ERPRL+VFRSNKH+ VQVIDDTKMHTLASASTMQK I+EEF ++AGPTI+VAK
Sbjct: 58  KKVEGTPERPRLAVFRSNKHLAVQVIDDTKMHTLASASTMQKAIAEEFSYTAGPTIEVAK 117

Query: 415 KVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549
           KVGE+IAK+C++KGITKVAFDRGGYPYHGR++ALADAARE+GL F
Sbjct: 118 KVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGLDF 162


>ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|118487426|gb|ABK95541.1|
           unknown [Populus trichocarpa]
           gi|222863389|gb|EEF00520.1| predicted protein [Populus
           trichocarpa]
          Length = 165

 Score =  225 bits (573), Expect = 6e-57
 Identities = 111/168 (66%), Positives = 136/168 (80%)
 Frame = +1

Query: 46  MASASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHV 225
           M S+ + S   G   +  Q    LR+ + ++     P    + VEAKA+TR+++R ARH+
Sbjct: 1   MGSSGTCSLWSGFLGSGGQQ---LRASVAAVKQRTSPSLSFVTVEAKAKTRREDRTARHI 57

Query: 226 RIRKKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTID 405
           RIRKKVEGT +RPRL VFRSNKH+YVQVIDDTKMHTLASASTMQKP +++FD+S+GPTID
Sbjct: 58  RIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPFAQDFDYSSGPTID 117

Query: 406 VAKKVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549
           VAKKVGEVIAK+C++KGITKVAFDRGGYPYHGR+ ALADAARE+GLQF
Sbjct: 118 VAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRVAALADAARENGLQF 165


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  224 bits (570), Expect = 1e-56
 Identities = 119/174 (68%), Positives = 136/174 (78%), Gaps = 6/174 (3%)
 Frame = +1

Query: 46  MASASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKP------QYQTLVVEAKARTRQDN 207
           MAS S      G+ S  +    FL S L       KP      Q +++VVEAK +T  ++
Sbjct: 1   MASVSGC----GSVSLITNRSTFLGSGLQHRAVFLKPWSSSSLQSRSMVVEAKTKTSSED 56

Query: 208 RVARHVRIRKKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFS 387
           R+ARH RIRKKV GTTERPRL VFRSNKH+YVQVIDDTKMHTLASAST QKPISEEFD++
Sbjct: 57  RIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYT 116

Query: 388 AGPTIDVAKKVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549
           +GPTI+VAKKVGEVIAK+C++KGITKVAFDRGGYPYHGRIEALA AAREHGLQF
Sbjct: 117 SGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170


>ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18 [Arabidopsis thaliana]
          Length = 170

 Score =  223 bits (567), Expect = 3e-56
 Identities = 108/136 (79%), Positives = 124/136 (91%)
 Frame = +1

Query: 142 SAPKPQYQTLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHIYVQVIDDT 321
           S+   Q +++VVEAK +T  ++R+ARH RIRKKV GTTERPRL VFRSNKH+YVQVIDDT
Sbjct: 35  SSSSLQSRSMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDT 94

Query: 322 KMHTLASASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKTCIDKGITKVAFDRGGYPYHG 501
           KMHTLASAST QKPISEEFD+++GPTI+VAKKVGEVIAK+C++KGITKVAFDRGGYPYHG
Sbjct: 95  KMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHG 154

Query: 502 RIEALADAAREHGLQF 549
           RIEALA AAREHGLQF
Sbjct: 155 RIEALAAAAREHGLQF 170