BLASTX nr result
ID: Cnidium21_contig00004322
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00004322 (643 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precu... 228 1e-57 gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595... 226 2e-57 ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|1... 225 6e-57 ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid... 224 1e-56 ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana... 223 3e-56 >ref|XP_002509912.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus communis] gi|223549811|gb|EEF51299.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus communis] Length = 164 Score = 228 bits (580), Expect = 1e-57 Identities = 114/152 (75%), Positives = 131/152 (86%) Frame = +1 Query: 94 YSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLS 273 Y QH S P+ P++ L +EA +TR++NR ARHVRIRKKVEGT ERPRLS Sbjct: 15 YRQHLSASISARPNPTPIQPPRF--LRIEANTKTRRENRTARHVRIRKKVEGTPERPRLS 72 Query: 274 VFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKTCIDK 453 VFRSNKH+YVQVIDD+KMHTLASASTMQKPISEEFD+S+GPT++VAKKVGEVIAK+C++K Sbjct: 73 VFRSNKHLYVQVIDDSKMHTLASASTMQKPISEEFDYSSGPTLEVAKKVGEVIAKSCLEK 132 Query: 454 GITKVAFDRGGYPYHGRIEALADAAREHGLQF 549 GITKVAFDRGGYPYHGRIEALADAARE+GLQF Sbjct: 133 GITKVAFDRGGYPYHGRIEALADAARENGLQF 164 >gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown [Lotus japonicus] Length = 162 Score = 226 bits (577), Expect = 2e-57 Identities = 116/165 (70%), Positives = 133/165 (80%) Frame = +1 Query: 55 ASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHVRIR 234 ASSLSFLH + S L + S P P VVEAK+RTR D+R ARH RIR Sbjct: 3 ASSLSFLHSCAFPSSSSSSSLFTT-----STPNPNSLPFVVEAKSRTRTDDRTARHARIR 57 Query: 235 KKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTIDVAK 414 KKVEGT ERPRL+VFRSNKH+ VQVIDDTKMHTLASASTMQK I+EEF ++AGPTI+VAK Sbjct: 58 KKVEGTPERPRLAVFRSNKHLAVQVIDDTKMHTLASASTMQKAIAEEFSYTAGPTIEVAK 117 Query: 415 KVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549 KVGE+IAK+C++KGITKVAFDRGGYPYHGR++ALADAARE+GL F Sbjct: 118 KVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGLDF 162 >ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|118487426|gb|ABK95541.1| unknown [Populus trichocarpa] gi|222863389|gb|EEF00520.1| predicted protein [Populus trichocarpa] Length = 165 Score = 225 bits (573), Expect = 6e-57 Identities = 111/168 (66%), Positives = 136/168 (80%) Frame = +1 Query: 46 MASASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKPQYQTLVVEAKARTRQDNRVARHV 225 M S+ + S G + Q LR+ + ++ P + VEAKA+TR+++R ARH+ Sbjct: 1 MGSSGTCSLWSGFLGSGGQQ---LRASVAAVKQRTSPSLSFVTVEAKAKTRREDRTARHI 57 Query: 226 RIRKKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFSAGPTID 405 RIRKKVEGT +RPRL VFRSNKH+YVQVIDDTKMHTLASASTMQKP +++FD+S+GPTID Sbjct: 58 RIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPFAQDFDYSSGPTID 117 Query: 406 VAKKVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549 VAKKVGEVIAK+C++KGITKVAFDRGGYPYHGR+ ALADAARE+GLQF Sbjct: 118 VAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRVAALADAARENGLQF 165 >ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp. lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp. lyrata] Length = 170 Score = 224 bits (570), Expect = 1e-56 Identities = 119/174 (68%), Positives = 136/174 (78%), Gaps = 6/174 (3%) Frame = +1 Query: 46 MASASSLSFLHGASSAYSQHHPFLRSKLPSLLSAPKP------QYQTLVVEAKARTRQDN 207 MAS S G+ S + FL S L KP Q +++VVEAK +T ++ Sbjct: 1 MASVSGC----GSVSLITNRSTFLGSGLQHRAVFLKPWSSSSLQSRSMVVEAKTKTSSED 56 Query: 208 RVARHVRIRKKVEGTTERPRLSVFRSNKHIYVQVIDDTKMHTLASASTMQKPISEEFDFS 387 R+ARH RIRKKV GTTERPRL VFRSNKH+YVQVIDDTKMHTLASAST QKPISEEFD++ Sbjct: 57 RIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYT 116 Query: 388 AGPTIDVAKKVGEVIAKTCIDKGITKVAFDRGGYPYHGRIEALADAAREHGLQF 549 +GPTI+VAKKVGEVIAK+C++KGITKVAFDRGGYPYHGRIEALA AAREHGLQF Sbjct: 117 SGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170 >ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana] gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S ribosomal protein L18, chloroplastic; AltName: Full=CL18; Flags: Precursor gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S Ribosomal protein L18 from Thermotoga maritima gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182 come from this gene [Arabidopsis thaliana] gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal protein L18 [Arabidopsis thaliana] gi|110740956|dbj|BAE98573.1| hypothetical protein [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S ribosomal protein L18 [Arabidopsis thaliana] Length = 170 Score = 223 bits (567), Expect = 3e-56 Identities = 108/136 (79%), Positives = 124/136 (91%) Frame = +1 Query: 142 SAPKPQYQTLVVEAKARTRQDNRVARHVRIRKKVEGTTERPRLSVFRSNKHIYVQVIDDT 321 S+ Q +++VVEAK +T ++R+ARH RIRKKV GTTERPRL VFRSNKH+YVQVIDDT Sbjct: 35 SSSSLQSRSMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDT 94 Query: 322 KMHTLASASTMQKPISEEFDFSAGPTIDVAKKVGEVIAKTCIDKGITKVAFDRGGYPYHG 501 KMHTLASAST QKPISEEFD+++GPTI+VAKKVGEVIAK+C++KGITKVAFDRGGYPYHG Sbjct: 95 KMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHG 154 Query: 502 RIEALADAAREHGLQF 549 RIEALA AAREHGLQF Sbjct: 155 RIEALAAAAREHGLQF 170