BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004317
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              211   2e-77
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   207   3e-76
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   192   3e-71
ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyra...   180   8e-69
ref|NP_190937.1| RING/U-box domain-containing protein [Arabidops...   177   5e-68

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  211 bits (537), Expect(2) = 2e-77
 Identities = 92/135 (68%), Positives = 111/135 (82%), Gaps = 2/135 (1%)
 Frame = +3

Query: 831  GDALCEALILVSSKFYCPFKDCSELLIQDADSNGIVESECPSCRRLFCAKCKVPWHSGIK 1010
            G+ALCEALIL S KFYCP+KDCS LLI+D +   I ESECP+CRRLFCA+C+VPWHSGI 
Sbjct: 196  GNALCEALILGSQKFYCPYKDCSALLIRD-EGEVIKESECPNCRRLFCAQCEVPWHSGID 254

Query: 1011 CGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERSEGCLFMKCRCGHAFCYNCG 1190
            CGEFQKL+K+ER   DI++M LAK N W RCPKCKFYVE+S GC++++CRCG AFCYNCG
Sbjct: 255  CGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCG 314

Query: 1191 AP--LVNHYCTKCKH 1229
            AP   ++H C  C+H
Sbjct: 315  APSSTISHICPHCRH 329



 Score =  105 bits (263), Expect(2) = 2e-77
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +1

Query: 613 FTCEICVELKPFKESFPIKGCSHCYCSDCVHKYVALKLQFNITRIPCPDSGCKGHLEPEC 792
           F CEIC++ KP   SF IKGC H YCSDC+ KYVA KLQ N++RI CP   C G LEP+ 
Sbjct: 123 FVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQ 182

Query: 793 CQSILPEEVFNRWG 834
           C+ ILP  VF+RWG
Sbjct: 183 CRPILPSHVFDRWG 196


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like [Vitis
            vinifera]
          Length = 358

 Score =  207 bits (527), Expect(2) = 3e-76
 Identities = 91/133 (68%), Positives = 109/133 (81%), Gaps = 2/133 (1%)
 Frame = +3

Query: 831  GDALCEALILVSSKFYCPFKDCSELLIQDADSNGIVESECPSCRRLFCAKCKVPWHSGIK 1010
            G+ALCEALIL S KFYCP+KDCS LLI+D +   I ESECP+CRRLFCA+C+VPWHSGI 
Sbjct: 196  GNALCEALILGSQKFYCPYKDCSALLIRD-EGEVIKESECPNCRRLFCAQCEVPWHSGID 254

Query: 1011 CGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERSEGCLFMKCRCGHAFCYNCG 1190
            CGEFQKL+K+ER   DI++M LAK N W RCPKCKFYVE+S GC++++CRCG AFCYNCG
Sbjct: 255  CGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCG 314

Query: 1191 AP--LVNHYCTKC 1223
            AP   ++H C  C
Sbjct: 315  APSSTISHICPHC 327



 Score =  105 bits (263), Expect(2) = 3e-76
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = +1

Query: 613 FTCEICVELKPFKESFPIKGCSHCYCSDCVHKYVALKLQFNITRIPCPDSGCKGHLEPEC 792
           F CEIC++ KP   SF IKGC H YCSDC+ KYVA KLQ N++RI CP   C G LEP+ 
Sbjct: 123 FVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQ 182

Query: 793 CQSILPEEVFNRWG 834
           C+ ILP  VF+RWG
Sbjct: 183 CRPILPSHVFDRWG 196


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  192 bits (487), Expect(2) = 3e-71
 Identities = 84/135 (62%), Positives = 103/135 (76%), Gaps = 3/135 (2%)
 Frame = +3

Query: 831  GDALCEALILVSSKFYCPFKDCSELLIQDADSNGIVESECPSCRRLFCAKCKVPWHSGIK 1010
            G+ALCEA+IL S KFYCPFKDCS +LI D +   + ESECP+C R+FCA+CKVPWHS I 
Sbjct: 171  GNALCEAVILGSQKFYCPFKDCSAMLIDDGEEV-VRESECPNCWRMFCAQCKVPWHSQIS 229

Query: 1011 CGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERSEGCLFMKCRCGHAFCYNCG 1190
            C E++ LHK+ERE  DI+LM LAK   W RCPKC+ +VE+ EGC +MKCRCG  FCY+CG
Sbjct: 230  CEEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCG 289

Query: 1191 APLVN---HYCTKCK 1226
            +  +N   HYC KCK
Sbjct: 290  STDLNPVTHYCYKCK 304



 Score =  104 bits (260), Expect(2) = 3e-71
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +1

Query: 613 FTCEICVELKPFKESFPIKGCSHCYCSDCVHKYVALKLQFNITRIPCPDSGCKGHLEPEC 792
           F C+ICVE    K SF IKGC+H YC++C+ KYV+ KLQ NIT+I CP   CKG LEPE 
Sbjct: 98  FVCQICVEPTILKNSFLIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPED 157

Query: 793 CQSILPEEVFNRWG 834
           C+S+LPE VF+RWG
Sbjct: 158 CRSVLPENVFDRWG 171


>ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323773|gb|EFH54194.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  180 bits (457), Expect(2) = 8e-69
 Identities = 77/134 (57%), Positives = 96/134 (71%), Gaps = 2/134 (1%)
 Frame = +3

Query: 831  GDALCEALILVSSKFYCPFKDCSELLIQDADSNGIVESECPSCRRLFCAKCKVPWHSGIK 1010
            GDALCEA+++ S +FYCP+KDCS LL  D +S  + +SECP C R+ C +C   WH  + 
Sbjct: 189  GDALCEAVVMRSKRFYCPYKDCSALLFMD-ESEVMKDSECPHCHRMVCVECGTKWHPEMT 247

Query: 1011 CGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERSEGCLFMKCRCGHAFCYNCG 1190
            C EFQKL +NER   DI+L  +AKK +W RCP CKFY+E+S GCL+MKCRCG AFCYNCG
Sbjct: 248  CEEFQKLAENERGRDDILLATMAKKKKWKRCPSCKFYIEKSHGCLYMKCRCGLAFCYNCG 307

Query: 1191 APL--VNHYCTKCK 1226
             P    +HYC  CK
Sbjct: 308  TPSRDHSHYCYNCK 321



 Score =  108 bits (269), Expect(2) = 8e-69
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = +1

Query: 613 FTCEICVELKPFKESFPIKGCSHCYCSDCVHKYVALKLQFNITRIPCPDSGCKGHLEPEC 792
           F CEICVE K   E+F I GCSH YC+DCV KY+A KLQ NI  I CP SGC G LEP+ 
Sbjct: 116 FDCEICVETKSIIETFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQ 175

Query: 793 CQSILPEEVFNRWG 834
           C+ ILP EVF+RWG
Sbjct: 176 CRQILPREVFDRWG 189


>ref|NP_190937.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|6729520|emb|CAB67676.1| putative protein [Arabidopsis
            thaliana] gi|21536688|gb|AAM61020.1| unknown [Arabidopsis
            thaliana] gi|332645607|gb|AEE79128.1| RING/U-box
            domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  177 bits (450), Expect(2) = 5e-68
 Identities = 74/134 (55%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
 Frame = +3

Query: 831  GDALCEALILVSSKFYCPFKDCSELLIQDADSNGIVESECPSCRRLFCAKCKVPWHSGIK 1010
            GDALCEA+++ S KFYCP+KDCS L+  +     + +SECP C R+ C +C   WH  + 
Sbjct: 186  GDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKDSECPHCHRMVCVECGTQWHPEMT 245

Query: 1011 CGEFQKLHKNERESGDIMLMQLAKKNRWTRCPKCKFYVERSEGCLFMKCRCGHAFCYNCG 1190
            C EFQKL  NER   DI+L  +AK+ +W RCP CKFY+E+S+GCL+MKCRCG AFCYNCG
Sbjct: 246  CEEFQKLAANERGRDDILLATMAKQKKWKRCPSCKFYIEKSQGCLYMKCRCGLAFCYNCG 305

Query: 1191 APLVN--HYCTKCK 1226
             P  +  HYC  CK
Sbjct: 306  TPSRDHTHYCYNCK 319



 Score =  108 bits (269), Expect(2) = 5e-68
 Identities = 48/74 (64%), Positives = 55/74 (74%)
 Frame = +1

Query: 613 FTCEICVELKPFKESFPIKGCSHCYCSDCVHKYVALKLQFNITRIPCPDSGCKGHLEPEC 792
           F CEICV+ K   ESF I GCSH YC+DCV KY+A KLQ NI  I CP SGC G LEP+ 
Sbjct: 113 FDCEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQ 172

Query: 793 CQSILPEEVFNRWG 834
           C+ ILP+EVF+RWG
Sbjct: 173 CRQILPKEVFDRWG 186