BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004306
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro...    77   1e-12
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo...    77   1e-12
ref|XP_002531375.1| RNA and export factor binding protein, putat...    75   5e-12
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro...    74   1e-11
ref|XP_002299886.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
           gi|297746115|emb|CBI16171.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/108 (41%), Positives = 52/108 (48%)
 Frame = +3

Query: 3   RQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANISXXXXXXXXXXXXXXAFRRQQXX 182
           R+ DA AAVKRYN VQLDGKPMKIE+VG  +  PA +                  + +  
Sbjct: 136 RRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVG 195

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 326
                                    EKVS EDLDADLEKYH EAMQ+N
Sbjct: 196 SQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQIN 243


>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
           protein 2-like [Cucumis sativus]
          Length = 248

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
 Frame = +3

Query: 3   RQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLV-----APANISXXXXXXXXXXXXXXAFR 167
           RQ+DA AA+KRYN VQLDGKPMK+E+VG  +V     AP+N S                 
Sbjct: 136 RQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRN 195

Query: 168 RQQXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 326
           R                             EK+S EDLDADL+KYH+EAMQ+N
Sbjct: 196 RGGGRGRGPGRGRGRGRGSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 248


>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223529035|gb|EEF31023.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 247

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 45/108 (41%), Positives = 51/108 (47%)
 Frame = +3

Query: 3   RQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANISXXXXXXXXXXXXXXAFRRQQXX 182
           R++DA AAVKRYN VQLDGKPMKIE+VG  +  PA                   + +   
Sbjct: 140 RRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAANGNFGNSNGAPRGGQGRGGT 199

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 326
                                    EKVS EDLDADLEKYH EAMQ N
Sbjct: 200 MRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247


>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
           sativus]
          Length = 237

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/108 (40%), Positives = 54/108 (50%)
 Frame = +3

Query: 3   RQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANISXXXXXXXXXXXXXXAFRRQQXX 182
           RQ+DA AA+KRYN VQLDGKPMK+E+VG  +V PA  +                R     
Sbjct: 136 RQADALAAIKRYNNVQLDGKPMKLEIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAM--- 192

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 326
                                    EK+S EDLDADL+KYH+EAMQ+N
Sbjct: 193 ---GRNRGGGRGRSGSGSGSGRGHGEKLSAEDLDADLDKYHEEAMQIN 237


>ref|XP_002299886.1| predicted protein [Populus trichocarpa] gi|222847144|gb|EEE84691.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/108 (44%), Positives = 52/108 (48%)
 Frame = +3

Query: 3   RQSDAFAAVKRYNGVQLDGKPMKIEMVGVKLVAPANISXXXXXXXXXXXXXXAFRRQQXX 182
           RQ++A AAVKRYN VQLDGKPMKIE+VG   VAP                  AF      
Sbjct: 129 RQAEAVAAVKRYNNVQLDGKPMKIEIVGTNFVAP----------PAPPAANAAFGNSN-- 176

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXEKVSPEDLDADLEKYHQEAMQLN 326
                                    EKVS EDLDADLEKYH EAMQ+N
Sbjct: 177 -------------GVSGRGRGRGGGEKVSAEDLDADLEKYHSEAMQIN 211