BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004304
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   285   2e-74
sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, c...   284   2e-74
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   281   3e-73
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana s...   280   5e-73
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   279   1e-72

>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
            vinifera]
          Length = 311

 Score =  285 bits (728), Expect = 2e-74
 Identities = 150/240 (62%), Positives = 176/240 (73%)
 Frame = -3

Query: 1112 DDGDDRVESHSAEAGRLYVGNLPYAMTSSQLADIFAEAGPVISVEIVYDRVTDRSRGFAF 933
            ++ +D   S SAEA RLYVGNLPY+MTSSQL D+F EAG VISVEIVYDRVTDRSRGF  
Sbjct: 89   EEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGF-- 146

Query: 932  XXXXXXXXXXXXXXXXXXXXXXXXXSRGFAFVTMAGVEEAKEAIRMFNGSQVGGRTVKVN 753
                                         AFVTM  V+EAKEAIRMF+GSQVGGRTVKVN
Sbjct: 147  -----------------------------AFVTMGSVQEAKEAIRMFDGSQVGGRTVKVN 177

Query: 752  FPEVPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKV 573
            FPEVPRGGER VMGPKI+SSY+ FVD+P+K+YAGNLSW +TS+ LR+ FAD PGLL AKV
Sbjct: 178  FPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKV 237

Query: 572  IYDRQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAEDRARRKPPPRESFE 393
            IY+R+SGRS+G+GF++F SAE+ ESALN +N V+VEGR +RLN+A  RA   P P    E
Sbjct: 238  IYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRAPPAPSPGPGLE 297



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
 Frame = -3

Query: 728 EREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKVIYDRQSGR 549
           + E   PK+  S ++      +LY GNL +S+TS +L ++F +   ++S +++YDR + R
Sbjct: 88  QEEEEDPKVSDSAEA-----SRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRVTDR 142

Query: 548 SQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAE-----DRARRKPPPRESFENY 387
           S+G+ F+T  S +  + A+   +G  V GR +++N  E     +RA   P  R S+  +
Sbjct: 143 SRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGF 201


>sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
            Precursor gi|100390|pir||S12111 ribonucleoprotein, 33K,
            precursor - common tobacco gi|20005|emb|CAA37879.1|
            unnamed protein product [Nicotiana tabacum]
          Length = 324

 Score =  284 bits (727), Expect = 2e-74
 Identities = 147/235 (62%), Positives = 176/235 (74%)
 Frame = -3

Query: 1112 DDGDDRVESHSAEAGRLYVGNLPYAMTSSQLADIFAEAGPVISVEIVYDRVTDRSRGFAF 933
            ++ ++RVES S E GRLYVGNLP++MTSSQL++IFAEAG V +VEIVYDRVTDRSRGF  
Sbjct: 100  EEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGF-- 157

Query: 932  XXXXXXXXXXXXXXXXXXXXXXXXXSRGFAFVTMAGVEEAKEAIRMFNGSQVGGRTVKVN 753
                                         AFVTM  VEEAKEAIR+F+GSQVGGRTVKVN
Sbjct: 158  -----------------------------AFVTMGSVEEAKEAIRLFDGSQVGGRTVKVN 188

Query: 752  FPEVPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKV 573
            FPEVPRGGEREVM  KI+S+YQ FVD+PHKLY  NLSW++TSQ LR+ FADQPG +SAKV
Sbjct: 189  FPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKV 248

Query: 572  IYDRQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAEDRARRKPPP 408
            IYDR SGRS+G+GFITF SAE++ SAL+ +N V++EGR +RLN+A  +A    PP
Sbjct: 249  IYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPP 303


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  281 bits (718), Expect = 3e-73
 Identities = 148/240 (61%), Positives = 175/240 (72%)
 Frame = -3

Query: 1112 DDGDDRVESHSAEAGRLYVGNLPYAMTSSQLADIFAEAGPVISVEIVYDRVTDRSRGFAF 933
            ++ +D   S SAEA RLYVGNLPY+MTSSQL  +F EAG VISVEIVYDRVTDRSRGF  
Sbjct: 232  EEEEDPKVSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGF-- 289

Query: 932  XXXXXXXXXXXXXXXXXXXXXXXXXSRGFAFVTMAGVEEAKEAIRMFNGSQVGGRTVKVN 753
                                         AFVTM  V+EAKEAIRMF+GSQVGGRTVKVN
Sbjct: 290  -----------------------------AFVTMGSVQEAKEAIRMFDGSQVGGRTVKVN 320

Query: 752  FPEVPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKV 573
            FPEVPRGGER VMGPKI+SSY+ FVD+P+K+YAGNLSW +TS+ LR+ FAD PGLL AKV
Sbjct: 321  FPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKV 380

Query: 572  IYDRQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAEDRARRKPPPRESFE 393
            IY+R+SGRS+G+GF++F SAE+ ESALN ++ V+VEGR +RLN+A  RA   P P    E
Sbjct: 381  IYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLRLNLAAVRAPPAPSPGPGLE 440



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
 Frame = -3

Query: 728 EREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKVIYDRQSGR 549
           + E   PK+  S ++      +LY GNL +S+TS +L  +F +   ++S +++YDR + R
Sbjct: 231 QEEEEDPKVSDSAEA-----SRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRVTDR 285

Query: 548 SQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAE-----DRARRKPPPRESFENY 387
           S+G+ F+T  S +  + A+   +G  V GR +++N  E     +RA   P  R S+  +
Sbjct: 286 SRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMGPKIRSSYRGF 344


>emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
          Length = 319

 Score =  280 bits (716), Expect = 5e-73
 Identities = 145/234 (61%), Positives = 175/234 (74%)
 Frame = -3

Query: 1112 DDGDDRVESHSAEAGRLYVGNLPYAMTSSQLADIFAEAGPVISVEIVYDRVTDRSRGFAF 933
            ++ ++ VES S E GRLYVGNLP++MTSSQL++IFAEAG V +VEIVYDRVTDRSRGF  
Sbjct: 95   EEKEESVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGF-- 152

Query: 932  XXXXXXXXXXXXXXXXXXXXXXXXXSRGFAFVTMAGVEEAKEAIRMFNGSQVGGRTVKVN 753
                                         AFVTM  VEEAKEAIR+F+GSQVGGRTVKVN
Sbjct: 153  -----------------------------AFVTMGSVEEAKEAIRLFDGSQVGGRTVKVN 183

Query: 752  FPEVPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKV 573
            FPEVPRGGEREVM  KI+S+YQ FVD+PHKLY  NLSW++TSQ LR+ FADQPG +SAKV
Sbjct: 184  FPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKV 243

Query: 572  IYDRQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAEDRARRKPP 411
            IYDR SGRS+G+GFITF SAE+++SAL+ +N V++EGR +RLN+A  +A    P
Sbjct: 244  IYDRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAGQKAPLSSP 297



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 36/104 (34%), Positives = 59/104 (56%)
 Frame = -3

Query: 746 EVPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKVIY 567
           EV    E E    + + S +S      +LY GNL +S+TS +L EIFA+   + + +++Y
Sbjct: 83  EVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVY 142

Query: 566 DRQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAE 435
           DR + RS+G+ F+T  S E  + A+   +G  V GR +++N  E
Sbjct: 143 DRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPE 186


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
            kDa ribonucleoprotein, chloroplastic-like [Cucumis
            sativus]
          Length = 323

 Score =  279 bits (713), Expect = 1e-72
 Identities = 139/238 (58%), Positives = 177/238 (74%)
 Frame = -3

Query: 1103 DDRVESHSAEAGRLYVGNLPYAMTSSQLADIFAEAGPVISVEIVYDRVTDRSRGFAFXXX 924
            D++  S S EAG+LY+GNLPYAMTSSQL+++FAEAG V+SV+++YD+VTDRSRGF     
Sbjct: 104  DEQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGF----- 158

Query: 923  XXXXXXXXXXXXXXXXXXXXXXSRGFAFVTMAGVEEAKEAIRMFNGSQVGGRTVKVNFPE 744
                                      AFVTMA +EEAKEAIRMF+GSQ+GGRTV+VNFPE
Sbjct: 159  --------------------------AFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPE 192

Query: 743  VPRGGEREVMGPKIQSSYQSFVDTPHKLYAGNLSWSVTSQKLREIFADQPGLLSAKVIYD 564
            VPRGGE+EVMGP+I+SSY  FVD+PHK+YAGNL W +TSQ LR+ F +QPG+LSAK+IYD
Sbjct: 193  VPRGGEKEVMGPRIRSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYD 252

Query: 563  RQSGRSQGYGFITFESAESVESALNELNGVDVEGRIMRLNMAEDRARRKPPPRESFEN 390
            R SG+S+G+GF++FE+AE  ESAL  +NGV+VEGR +RLN+A  ++   P      EN
Sbjct: 253  RASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQSPISPAAFPRTEN 310