BLASTX nr result

ID: Cnidium21_contig00004260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004260
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   139   3e-31
gb|ABR18062.1| unknown [Picea sitchensis]                             139   3e-31
ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   137   9e-31
dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgar...   137   9e-31
ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group] g...   137   9e-31

>ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
           distachyon]
          Length = 289

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/73 (86%), Positives = 70/73 (95%)
 Frame = -1

Query: 414 SGLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKN 235
           +GLPSSASWQDLKDHMRRAGDVCF++V+REG GTTGIVDYTNYDDMKYAI+KLDD+EFKN
Sbjct: 122 TGLPSSASWQDLKDHMRRAGDVCFSEVYREGSGTTGIVDYTNYDDMKYAIKKLDDTEFKN 181

Query: 234 AFSRGVIRVKVYD 196
           AFS+G IRVK YD
Sbjct: 182 AFSKGYIRVKEYD 194


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = -1

Query: 414 SGLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKN 235
           SGLPSSASWQDLKDHMRRAGDVCF+QVFR+  GTTGIVDYTNYDDMKYAIRKLDDSEF+N
Sbjct: 117 SGLPSSASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRN 176

Query: 234 AFSRGVIRVKVY 199
           AFSRG IRVK Y
Sbjct: 177 AFSRGYIRVKEY 188


>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/73 (84%), Positives = 69/73 (94%)
 Frame = -1

Query: 414 SGLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKN 235
           +GLPSSASWQDLKDHMRRAGDVCF+QVFR+G GTTGIVDYTNYDDMKYAI+KLDDSEF+N
Sbjct: 116 TGLPSSASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRN 175

Query: 234 AFSRGVIRVKVYD 196
           AFSR  +RV+ YD
Sbjct: 176 AFSRAYVRVREYD 188


>dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326510429|dbj|BAJ87431.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 294

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/73 (84%), Positives = 69/73 (94%)
 Frame = -1

Query: 414 SGLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKN 235
           +GLPSSASWQDLKDHMRRAGDVCF++V+REGGGT GI DYTNYDDMKYAI+KLDD+EFKN
Sbjct: 123 TGLPSSASWQDLKDHMRRAGDVCFSEVYREGGGTIGIADYTNYDDMKYAIKKLDDTEFKN 182

Query: 234 AFSRGVIRVKVYD 196
           AFS+G IRVK YD
Sbjct: 183 AFSKGYIRVKEYD 195


>ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
           gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa
           Japonica Group]
          Length = 264

 Score =  137 bits (345), Expect = 9e-31
 Identities = 62/73 (84%), Positives = 70/73 (95%)
 Frame = -1

Query: 414 SGLPSSASWQDLKDHMRRAGDVCFAQVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKN 235
           +GLPSSASWQDLKDHMR+AGDVCF++V+REGGGT GIVDYTNYDDMKYAI+KLDDSEF+N
Sbjct: 116 TGLPSSASWQDLKDHMRKAGDVCFSEVYREGGGTVGIVDYTNYDDMKYAIKKLDDSEFRN 175

Query: 234 AFSRGVIRVKVYD 196
           AFS+G IRVK YD
Sbjct: 176 AFSKGHIRVKEYD 188


Top