BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004255
         (1802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]             100   2e-18
ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thalia...    98   8e-18
ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]...    98   8e-18
emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana]     98   8e-18
ref|XP_003610514.1| Importin alpha-1b subunit [Medicago truncatu...    95   5e-17

>tpg|DAA53967.1| TPA: importin alpha-1b subunit [Zea mays]
          Length = 526

 Score =  100 bits (248), Expect = 2e-18
 Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 13/316 (4%)
 Frame = -1

Query: 1007 RLFLVVGQDQGLAYLIEDCVALRLLKILENFDLLDIQYFAA----GILSRASFDECGWVM 840
            R  L + +   +  +I+  V  R +++L   DL  +Q+ AA     I S  S +    + 
Sbjct: 94   RKLLSIERSPPIEEVIKSGVVPRFVQLLTREDLPQLQFEAAWALTNIASGTSENTKVVID 153

Query: 839  KKAVPVLLKLICSQHNLLAVEATVTLMRLANKAPH-----VINVSLLRYLSALVKASKSY 675
              AVP+ +KL+ S  + +  +A   L  +A  +P      + N +L+  L+ L + +K  
Sbjct: 154  HGAVPIFVKLLGSGSDDVREQAVWALGNVAGDSPKCRDLVLANGALMPLLAQLNEHAK-L 212

Query: 674  GLIVHLAMFLAFVCR-RPDLSIDEKKNVLLPILGELLEKDFKPPHGCRKDLKPPHGYKVL 498
             ++ +    L+  CR +P  S D+ K  L P L  L+  + +               +VL
Sbjct: 213  SMLRNATWTLSNFCRGKPQPSFDQTKPAL-PALARLIHSNDE---------------EVL 256

Query: 497  --ACYSLSYLTYDSYETCAAV-RVQICERLVELTSHESSSVVGSALGVIGNIVRWGNPEQ 327
              AC++LSYL+  + +   AV    +C RLVEL  H S SV+  AL  +GNIV  G+ +Q
Sbjct: 257  TDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT-GDDQQ 315

Query: 326  IENFAKGHMFLQWLDKNVLCSEMKKIQAQGCQIISNIAARRETLIEVMVKAGLVDPICTL 147
             +     H  L  L   +  +  K I+ + C  ISNI A  +  I+ ++ AG++ P+  L
Sbjct: 316  TQCIID-HQALPRLLNLLTQNHKKSIKKEACWTISNITAGNKDQIQAVISAGIIAPLLQL 374

Query: 146  LEGDQLDVKMEAAWAI 99
            L+G + D+K EAAWAI
Sbjct: 375  LQGAEFDIKKEAAWAI 390


>ref|NP_001031011.1| importin alpha isoform 4 [Arabidopsis thaliana]
            gi|332190302|gb|AEE28423.1| importin alpha isoform 4
            [Arabidopsis thaliana]
          Length = 456

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 92/318 (28%), Positives = 154/318 (48%), Gaps = 15/318 (4%)
 Frame = -1

Query: 1007 RLFLVVGQDQGLAYLIEDCVALRLLKILENFDLLDIQYFAAGILSRASF---DECGWVMK 837
            R  L + +   +  +I+  V  R ++ L   D   +Q+ AA  L+  +    D    V++
Sbjct: 22   RKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIE 81

Query: 836  K-AVPVLLKLICSQHNLLAVEATVTLMRLANKAPH----VINVSLLRYLSALVKASKSYG 672
            + AVP+ +KL+ S  + +  +A   L  +A  +P+    V+N   L  L A +  +    
Sbjct: 82   QGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLS 141

Query: 671  LIVHLAMFLAFVCRRPDLSIDEKKNVLLPILGELLEKDFKPPHGCRKDLKPPHGYKVL-- 498
            ++ +    L+  CR    +  E+    LPIL +L+  + +               +VL  
Sbjct: 142  MLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDE---------------EVLTD 186

Query: 497  ACYSLSYLTYDSYETCAAV-RVQICERLVELTSHESSSVVGSALGVIGNIVRWGNPEQ-- 327
            AC++LSYL+    +   AV    +C RLVEL  H+S +V+  AL  +GNIV   + +   
Sbjct: 187  ACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQF 246

Query: 326  -IENFAKGHMFLQWLDKNVLCSEMKK-IQAQGCQIISNIAARRETLIEVMVKAGLVDPIC 153
             IE+    H++      N+L    KK I+ + C  ISNI A  +  IE +V AG++ P+ 
Sbjct: 247  IIESGVLPHLY------NLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLV 300

Query: 152  TLLEGDQLDVKMEAAWAI 99
             LL+  + D+K EAAWAI
Sbjct: 301  HLLQNAEFDIKKEAAWAI 318


>ref|NP_172398.1| importin alpha isoform 4 [Arabidopsis thaliana]
            gi|30681049|ref|NP_849623.1| importin alpha isoform 4
            [Arabidopsis thaliana] gi|3249096|gb|AAC24079.1| Match to
            mRNA for importin alpha-like protein 4 (impa4) gb|Y14616
            from A. thaliana. ESTs gb|N96440, gb|N37503, gb|N37498
            and gb|T42198 come from this gene [Arabidopsis thaliana]
            gi|20259334|gb|AAM13992.1| putative importin alpha
            protein [Arabidopsis thaliana] gi|21436201|gb|AAM51388.1|
            putative importin alpha protein [Arabidopsis thaliana]
            gi|222422859|dbj|BAH19416.1| AT1G09270 [Arabidopsis
            thaliana] gi|332190300|gb|AEE28421.1| importin alpha
            isoform 4 [Arabidopsis thaliana]
            gi|332190301|gb|AEE28422.1| importin alpha isoform 4
            [Arabidopsis thaliana]
          Length = 538

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 92/318 (28%), Positives = 154/318 (48%), Gaps = 15/318 (4%)
 Frame = -1

Query: 1007 RLFLVVGQDQGLAYLIEDCVALRLLKILENFDLLDIQYFAAGILSRASF---DECGWVMK 837
            R  L + +   +  +I+  V  R ++ L   D   +Q+ AA  L+  +    D    V++
Sbjct: 104  RKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIE 163

Query: 836  K-AVPVLLKLICSQHNLLAVEATVTLMRLANKAPH----VINVSLLRYLSALVKASKSYG 672
            + AVP+ +KL+ S  + +  +A   L  +A  +P+    V+N   L  L A +  +    
Sbjct: 164  QGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLS 223

Query: 671  LIVHLAMFLAFVCRRPDLSIDEKKNVLLPILGELLEKDFKPPHGCRKDLKPPHGYKVL-- 498
            ++ +    L+  CR    +  E+    LPIL +L+  + +               +VL  
Sbjct: 224  MLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDE---------------EVLTD 268

Query: 497  ACYSLSYLTYDSYETCAAV-RVQICERLVELTSHESSSVVGSALGVIGNIVRWGNPEQ-- 327
            AC++LSYL+    +   AV    +C RLVEL  H+S +V+  AL  +GNIV   + +   
Sbjct: 269  ACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQF 328

Query: 326  -IENFAKGHMFLQWLDKNVLCSEMKK-IQAQGCQIISNIAARRETLIEVMVKAGLVDPIC 153
             IE+    H++      N+L    KK I+ + C  ISNI A  +  IE +V AG++ P+ 
Sbjct: 329  IIESGVLPHLY------NLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLV 382

Query: 152  TLLEGDQLDVKMEAAWAI 99
             LL+  + D+K EAAWAI
Sbjct: 383  HLLQNAEFDIKKEAAWAI 400


>emb|CAA74966.1| Importin alpha-like protein [Arabidopsis thaliana]
          Length = 528

 Score = 97.8 bits (242), Expect = 8e-18
 Identities = 90/317 (28%), Positives = 152/317 (47%), Gaps = 14/317 (4%)
 Frame = -1

Query: 1007 RLFLVVGQDQGLAYLIEDCVALRLLKILENFDLLDIQYFAAGILSRASF---DECGWVMK 837
            R  L + +   +  +I+  V  R ++ L   D   +Q+ AA  L+  +    D    V++
Sbjct: 95   RKLLSIERSPPIDEVIKAGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIE 154

Query: 836  K-AVPVLLKLICSQHNLLAVEATVTLMRLANKAPH----VINVSLLRYLSALVKASKSYG 672
            + AVP+ +KL+ S  + +  +A   L  +A  +P+    V+N   L  L A +  +    
Sbjct: 155  QGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLS 214

Query: 671  LIVHLAMFLAFVCRRPDLSIDEKKNVLLPILGELLEKDFKPPHGCRKDLKPPHGYKVL-- 498
            ++ +    L+  CR    +  E+    LPIL +L+  + +               +VL  
Sbjct: 215  MLRNATWTLSNFCRGKPPTPFEQVKPALPILRQLIYLNDE---------------EVLTD 259

Query: 497  ACYSLSYLTYDSYETCAAV-RVQICERLVELTSHESSSVVGSALGVIGNIVRWGNPEQ-- 327
            AC++LSYL+    +   AV    +C RLVEL  H+S +V+  AL  +GNIV   + +   
Sbjct: 260  ACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRTVGNIVTGDDSQTQF 319

Query: 326  -IENFAKGHMFLQWLDKNVLCSEMKKIQAQGCQIISNIAARRETLIEVMVKAGLVDPICT 150
             IE+    H++      N   +  K I+ + C  ISNI A  +  IE +V AG++ P+  
Sbjct: 320  IIESGVLPHLY------NCDANHKKSIKKEACWTISNITAGNKLQIEAVVGAGIILPLVH 373

Query: 149  LLEGDQLDVKMEAAWAI 99
            LL+  + D+K EAAWAI
Sbjct: 374  LLQNAEFDIKKEAAWAI 390


>ref|XP_003610514.1| Importin alpha-1b subunit [Medicago truncatula]
           gi|355511569|gb|AES92711.1| Importin alpha-1b subunit
           [Medicago truncatula]
          Length = 514

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 14/304 (4%)
 Frame = -1

Query: 968 YLIEDCVALRLLKILENFDLLDIQYFAAGILSRA----SFDECGWVMKKAVPVLLKLICS 801
           ++I+  V  R ++ L   D   +QY AA IL+      S +    +   AVP+L+KL+ S
Sbjct: 31  HVIQSGVVPRFVEFLFRDDFPQLQYEAAWILTNVAGGTSVNTKVVIDHGAVPILVKLLSS 90

Query: 800 QHNLLAVEATVTLMRLANKAPHVINV-----SLLRYLSALVKASKSYGLIVHLAMFLAFV 636
             + +  +A  TL  +A  +P   ++     +L+  LS L + +K   L +   + L+  
Sbjct: 91  PSDDVREQAAWTLGNVAGDSPSCRDLVLSHGALIPLLSQLNEQAKLSMLRI-ATLALSNF 149

Query: 635 CRRPDLSIDEKKNVLLPILGELLEKDFKPPHGCRKDLKPPHGYKVLACYSLSYLT-YDSY 459
           CR       E+    LP L  L+  + +                  AC++LSYL+ Y S 
Sbjct: 150 CRGKPPPPFEQVRQALPTLRRLIFSNDEE-------------VVTEACWALSYLSKYGSN 196

Query: 458 -ETCAAVRVQICERLVELTSHESSSVVGSALGVIGNIVRWGNPEQIENFAKG---HMFLQ 291
            E  A +   IC+RLVEL    S SV+  AL  +GN ++  + +  ++  +    H  L 
Sbjct: 197 DEIQAVIEAGICDRLVELLLRPSPSVLTPALQTVGNFIKVDDMQTQDSICQAIINHGLLP 256

Query: 290 WLDKNVLCSEMKKIQAQGCQIISNIAARRETLIEVMVKAGLVDPICTLLEGDQLDVKMEA 111
           +L   ++ +  + I+   C IISNI       I+ ++KAGL+ P+  LL+  +L +K EA
Sbjct: 257 FLLSLLIQNHKESIKKDACWIISNIVVGNRERIQAVIKAGLIAPLVNLLQNAELAIKKEA 316

Query: 110 AWAI 99
           AWA+
Sbjct: 317 AWAL 320