BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004230
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   133   1e-29
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   127   1e-27
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   126   2e-27
gb|ACU17923.1| unknown [Glycine max]                                  126   2e-27

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = +1

Query: 1    NALKKEFRRVFEHMDAEFDDLSNDEKNAAYEHKASAWYQVSYHPEWVKMSLDLQDPEAND 180
            ++LKKEFR++FE M+++FD L++DEKN  YE KASAWYQV+YHP WVK SL+LQ+P+   
Sbjct: 930  SSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVF 989

Query: 181  KETVMLSFPWIAADYLARIKIRRGGMKDGSTQPNKPINSLA 303
             E VMLSF WI ADYLARIKIRR G   G+   +KPINSLA
Sbjct: 990  GERVMLSFAWITADYLARIKIRRKG--TGNVDSSKPINSLA 1028


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = +1

Query: 1    NALKKEFRRVFEHMDAEFDDLSNDEKNAAYEHKASAWYQVSYHPEWVKMSLDLQDPEAND 180
            ++LKKEFR++FE M+++FD L++DEKN  YE KASAWYQV+YHP WVK SL+LQ+P+   
Sbjct: 1092 SSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVF 1151

Query: 181  KETVMLSFPWIAADYLARIKIRRGGMKDGSTQPNKPINSLA 303
             E VMLSF WI ADYLARIKIRR G   G+   +KPINSLA
Sbjct: 1152 GERVMLSFAWITADYLARIKIRRKG--TGNVDSSKPINSLA 1190


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/101 (63%), Positives = 75/101 (74%)
 Frame = +1

Query: 1    NALKKEFRRVFEHMDAEFDDLSNDEKNAAYEHKASAWYQVSYHPEWVKMSLDLQDPEAND 180
            N+LKKEFR++FE MD EF+ L + EKN  YE KASAWYQV YHP WVK SL+LQDP+   
Sbjct: 1096 NSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAG 1155

Query: 181  KETVMLSFPWIAADYLARIKIRRGGMKDGSTQPNKPINSLA 303
              +VMLSF WIAADYLARIKIR    + G+    KP+NSLA
Sbjct: 1156 -TSVMLSFAWIAADYLARIKIRH--RETGNVDSAKPVNSLA 1193


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Glycine max]
          Length = 1204

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1    NALKKEFRRVFEHMDAEFDDLSNDEKNAAYEHKASAWYQVSYHPEWVKMSLDLQDPEAND 180
            +ALKKEFR  FE ++++  +LS +EKN  YE KASAWYQV+YHPEWVK SLDLQD  + +
Sbjct: 1091 SALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSEN 1150

Query: 181  KE------TVMLSFPWIAADYLARIKIRRGGMKDGSTQPNKPINSLA 303
            +E      TVMLSFPWIA DYLAR KIR+   + G+    KP++SLA
Sbjct: 1151 QEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLA 1197


>gb|ACU17923.1| unknown [Glycine max]
          Length = 290

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 6/107 (5%)
 Frame = +1

Query: 1   NALKKEFRRVFEHMDAEFDDLSNDEKNAAYEHKASAWYQVSYHPEWVKMSLDLQDPEAND 180
           +ALKKEFR  FE ++++  +LS +EKN  YE KASAWYQV+YHPEWVK SLDLQD  + +
Sbjct: 177 SALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSEN 236

Query: 181 KE------TVMLSFPWIAADYLARIKIRRGGMKDGSTQPNKPINSLA 303
           +E      TVMLSFPWIA DYLAR KIR+   + G+    KP++SLA
Sbjct: 237 QEADSLGSTVMLSFPWIAVDYLARTKIRQRHQRCGNFDSTKPVDSLA 283