BLASTX nr result

ID: Cnidium21_contig00004205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00004205
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...   142   4e-32
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub...   132   3e-29
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...   129   2e-28
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...   127   7e-28
ref|XP_002306915.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27

>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  142 bits (357), Expect = 4e-32
 Identities = 68/97 (70%), Positives = 84/97 (86%)
 Frame = -1

Query: 293 AYDVDIIGGLAKILPGIHPYFGVKLKSKLLLFNPKPNMLLEGKVVKLSQQAIHVIVLGFS 114
           AYDVDI    AKILPGIHPYFGV+LK+KLLLF+PKPNML+EGKVVKL+Q++IH++VLGFS
Sbjct: 48  AYDVDIPSKDAKILPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFS 107

Query: 113 SAVIIEEDIPKEFRYKIKSGKGYYVSRLQKQHKIKVG 3
           SA+I +E+I  EF+YKIK G+  +VSR  K+H IKVG
Sbjct: 108 SAIITDEEIRGEFKYKIKHGEAVFVSRSHKRHVIKVG 144


>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Glycine max]
          Length = 232

 Score =  132 bits (332), Expect = 3e-29
 Identities = 65/97 (67%), Positives = 79/97 (81%)
 Frame = -1

Query: 293 AYDVDIIGGLAKILPGIHPYFGVKLKSKLLLFNPKPNMLLEGKVVKLSQQAIHVIVLGFS 114
           AYD++ +   AKILPG+HPYFGVKLK  LLLF+PKPNMLLEGKVVK++Q++IHV+VLGFS
Sbjct: 48  AYDLNSLHTCAKILPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFS 107

Query: 113 SAVIIEEDIPKEFRYKIKSGKGYYVSRLQKQHKIKVG 3
           SA+I E+DI +EF  K K G+  Y SR  KQH IKVG
Sbjct: 108 SAIITEKDIREEFVCKTKRGQEVYASRSHKQHVIKVG 144


>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/97 (67%), Positives = 78/97 (80%)
 Frame = -1

Query: 293 AYDVDIIGGLAKILPGIHPYFGVKLKSKLLLFNPKPNMLLEGKVVKLSQQAIHVIVLGFS 114
           AYDV+     AKIL G+HPYFGVKLK  LLLF+PKPNMLLEGKVVK++Q++IHV+VLGFS
Sbjct: 48  AYDVNSFDTCAKILSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFS 107

Query: 113 SAVIIEEDIPKEFRYKIKSGKGYYVSRLQKQHKIKVG 3
           SA+I E+DI +EF  K K G+  YVSR  K+H IKVG
Sbjct: 108 SAIISEKDIREEFVCKTKRGQEVYVSRSHKRHVIKVG 144


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = -1

Query: 293 AYDVDIIGGLAKILPGIHPYFGVKLKSKLLLFNPKPNMLLEGKVVKLSQQAIHVIVLGFS 114
           AY+  II   AKIL G+HPYFGV +K+KLLLF+PKPNMLLEGKVVKL Q++IHVIVLGF+
Sbjct: 48  AYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFA 107

Query: 113 SAVIIEEDIPKEFRYKIKSGKGYYVSRLQKQHKIKVG 3
           SAVI  EDI  EF+++ K G+  +VSR  K H IKVG
Sbjct: 108 SAVITYEDIRDEFKHRTKHGEEMFVSRAHKHHIIKVG 144


>ref|XP_002306915.1| predicted protein [Populus trichocarpa] gi|222856364|gb|EEE93911.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/97 (61%), Positives = 78/97 (80%)
 Frame = -1

Query: 293 AYDVDIIGGLAKILPGIHPYFGVKLKSKLLLFNPKPNMLLEGKVVKLSQQAIHVIVLGFS 114
           AY VD     A+IL G+HPYFGV+L++ LL+F+PKPNMLLEGKVVK+++++IH IVLGFS
Sbjct: 48  AYSVDPQDKCARILSGVHPYFGVRLRANLLIFSPKPNMLLEGKVVKITRESIHCIVLGFS 107

Query: 113 SAVIIEEDIPKEFRYKIKSGKGYYVSRLQKQHKIKVG 3
           SA+I +E+I  E +YK K G+G YVSR  K+H IKVG
Sbjct: 108 SAIITDENIRNELKYKAKHGEGVYVSRYHKRHVIKVG 144


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